HHsearch alignment for GI: 254780467 and conserved domain: TIGR01280
>TIGR01280 xseB exodeoxyribonuclease VII, small subunit; InterPro: IPR003761 Exonuclease VII 3.1.11.6 from EC is composed of two non-identical subunits; one large subunit and 4 small ones . Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex.
Probab=99.70 E-value=9.1e-17 Score=131.20 Aligned_cols=64 Identities=44% Similarity=0.761 Sum_probs=60.4
Q ss_pred HCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 2899999999999999987799999999999999999999999999999999999983158873
Q gi|254780467|r 13 HLPFEEAVSELENIIAKLERGDVTLDESISIYERGEALKSHCEFLLCSAEKRIEQIKLNRDNKI 76 (86)
Q Consensus 13 ~~sfEea~~~Le~Iv~~LE~g~l~Lees~~~ye~G~~L~~~C~~~L~~ae~ki~~l~~~~~~~~ 76 (86)
T Consensus 2 ~~sFE~~l~eLE~iV~~LE~G~~~LE~al~~ferG~~L~~~C~~kL~~Ae~~v~~l~~~~~~~~ 65 (69)
T TIGR01280 2 DISFEEALSELEQIVQKLESGDLALEEALNLFERGMALSRACEKKLEQAEQKVEKLLKENDEAV 65 (69)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 8768889999999998773589767889999888899999988999999999999852445656