HHsearch alignment for GI: 254780468 and conserved domain: COG2199
>COG2199 c-di-GMP synthetase (diguanylate cyclase, GGDEF domain) [Signal transduction mechanisms].
Probab=99.96 E-value=1.1e-26 Score=232.33 Aligned_cols=172 Identities=34% Similarity=0.526 Sum_probs=150.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 57731232166306775324066999999999999875533898489999976785798884277889999999999999
Q gi|254780468|r 521 EQKKSLEGILCNAFQDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDKYKKINDVLGIAVGDDVLVSLTRRIG 600 (963)
Q Consensus 521 ~~~~~~~~l~~~a~~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~~l~~idid~fk~iN~~~G~~~gD~lL~~ia~~L~ 600 (963)
T Consensus 8 ~~~~~~~~l~~~a~~D~LTgl~NR~~~~~~l~~~~~~~~~~-~~~~~l~liDiD~Fk~iND~~Gh~~GD~vL~~va~~L~ 86 (181)
T COG2199 8 RLRKAEERLERLALHDPLTGLPNRRAFEERLERALARARRH-GEPLALLLLDLDHFKQINDTYGHAAGDEVLREVARRLR 86 (181)
T ss_pred HHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHCC-CCCEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_conf 99999999999862542318726899999999999973433-88569999966410255754576879999999999999
Q ss_pred HHCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCEEEECCEEEEEEEEEEEEECCCCCCCH-HHHHHHHHH
Q ss_conf 8348997699980641020255669989999987655543101155254679999998776458988998-999999999
Q gi|254780468|r 601 ELLKFPDILARLSGNRFGIILISENNSLKIADFAIAMRKSIAMPINLLEREITVTASIGFASWTSSKITS-SEMLKNAEL 679 (963)
Q Consensus 601 ~~~~~~~~laR~~gdeFaill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~t~siGi~~~~~~~~~~-~~ll~~Ad~ 679 (963)
T Consensus 87 ~~~~~~~~~~R~gGdEF~i~l~~~~-~~~~~~~a~~i~~~i~~~~~~~~~~~~~t~siGia~~~~~~~~~~~~l~~~Ad~ 165 (181)
T COG2199 87 SNLREGDLVARLGGDEFAVLLPGTS-LEEAARLAERIRAALEEPFFLGGEELRVTVSIGVALYPEDGSDDAELLLRRADL 165 (181)
T ss_pred HHCCCCCEEEEECCCEEEEEECCCC-HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 8649887899987754899978999-899999999999998453445787336899899998068887609999999999
Q ss_pred HHHHHHHHCCCCEEE
Q ss_conf 999998708974052
Q gi|254780468|r 680 AMYHAKHRGGNHVES 694 (963)
Q Consensus 680 Al~~Ak~~g~~~~~~ 694 (963)
T Consensus 166 al~~ak~~G~~~~~~ 180 (181)
T COG2199 166 ALYRAKRAGRNRVVV 180 (181)
T ss_pred HHHHHHHHCCCCEEE
T ss_conf 999999838993664