HHsearch alignment for GI: 254780468 and conserved domain: COG3434
>COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains [Signal transduction mechanisms].
Probab=99.46 E-value=5.3e-13 Score=122.09 Aligned_cols=191 Identities=20% Similarity=0.223 Sum_probs=129.0
Q ss_pred HHHHHCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 35541146882214421000000003577553023035788897799679989999999999999887158998499997
Q gi|254780468|r 720 LYLVYHPIIRLMDEEIVGLEALIQWDHPKWGNISSSEFMLIAEELCMIKAINLFMLERIARDIISWRDQANMPPIFILIN 799 (963)
Q Consensus 720 ~~l~~QPi~~~~~~~~~~~E~l~R~~~~~~~~i~p~~fi~~ae~~gl~~~ld~~vl~~a~~~l~~~~~~~~~~~~~vsIN 799 (963)
T Consensus 3 ~~VARQPIldr-~~~v~gYEllfR--egekn~ype~vd~~~A--------t~~ii~~~fv~~gi~--k~~~gk--~cfIN 67 (407)
T COG3434 3 SFVARQPILDR-NKEVFGYELLFR--EGEKNKYPEDVDNSRA--------TYRIIIEEFVIQGID--KLANGK--KCFIN 67 (407)
T ss_pred CCEEECCCCCC-CCCEEEEEEEEC--CCCCCCCCCCCCHHHH--------HHHHHHHHHHHHHHH--HHCCCC--EEEEE
T ss_conf 31000541067-774577888750--5742248777986889--------999999999985014--532785--37996
Q ss_pred CCHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHH-HHHHHHCCC
Q ss_conf 6977943914899999999881999546999971337750999899999999988989999188776454-888972799
Q gi|254780468|r 800 IASKDLLDNELCEGMQALISKTLYSPSRIKLSFSESVVMGNPERSRLLLGRLRKIGISLTLDDFGTKCSL-LSYLGYIPF 878 (963)
Q Consensus 800 lS~~~l~~~~f~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~~~~l~~~G~~ialDdFG~g~ss-l~~L~~l~~ 878 (963)
T Consensus 68 Fpe~~l~~~~-----~e-----llPp~kvVieile~~~pt--~~Llsa~k~lk~kGY~laldDF~~~~~~~~~~ll~l-~ 134 (407)
T COG3434 68 FPEELLISDL-----PE-----LLPPDKVVIEILEDCPPT--EKLLSAIKELKQKGYLLALDDFIFSNVSEWKPLLPL-S 134 (407)
T ss_pred CCHHHHHCCC-----HH-----HCCCCCEEEEECCCCCCC--HHHHHHHHHHHHCCCEEEECCEEECCHHHHHHHCCH-H
T ss_conf 8699986077-----53-----479101798606899988--899999999986583443140454558778851366-4
Q ss_pred CEEEEEHHHHCCCCHH-HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCC
Q ss_conf 8999716885399945-799999999999977980999703998999989980998994052068999
Q gi|254780468|r 879 DTVKFNGSLMTGSTEK-RIAILRSIIPMAKNIETTIIAKDIYGEIDIKELTRMGCDYIQDSHVASPLG 945 (963)
Q Consensus 879 d~iKiD~sfv~~~~~~-~~~~v~sii~~a~~lgi~viAegVE~~~~~~~l~~~G~d~~QG~~~~~P~~ 945 (963)
T Consensus 135 diVkid---~~~~~~dk~~~~~~---~l~-~~~~~~LaekVETeeefeqAk~~Gf~lFQGyfFskPeI 195 (407)
T COG3434 135 DIVKID---FKRVTFDKARLFDR---DLG-YINKKFLAEKVETEEEFEQAKKAGFDLFQGYFFSKPEI 195 (407)
T ss_pred HEEEEE---EEECCCHHHHHHHH---HHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 647787---55358077789998---730-11366888763429999999983178755226686067