HHsearch alignment for GI: 254780468 and conserved domain: PRK09776
>PRK09776 putative sensor protein; Provisional.
Probab=99.80 E-value=2.6e-15 Score=140.67 Aligned_cols=139 Identities=14% Similarity=0.109 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 53788899974888999998325938999987997899988899762899778338978988626976899999999999
Q gi|254780468|r 392 ATGYFSQGIFSDGERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSF 471 (963)
Q Consensus 392 ~~~~~~~~l~~~~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~ 471 (963)
T Consensus 291 ~~r~~~~~l~~SE~rfR~~~e~saiGmAlV~~dGr~l~VN~alc~mlGYs~~ELl~l--tf~diThPdDl~~dl~~~~~L 368 (1116)
T PRK09776 291 AFRAERKHISESETRFRNAMEYSAIGMALVGTEGQWLQVNKALCQFLGYSQEELRGL--TFQQLTWPEDLNKDLQQVEKL 368 (1116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHCCCHHHHHHC--CHHHHCCCCCHHHHHHHHHHH
T ss_conf 999888887767999999987466646998689818981699998849899998529--898816962177789999999
Q ss_pred HCCCCCEEEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf 6078973899999986999689998722676879998899999998530577312321663
Q gi|254780468|r 472 VGYRRGRLQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCN 532 (963)
Q Consensus 472 ~~~~~~~~~~e~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~~ 532 (963)
T Consensus 369 laGei~~y~lEKRyirkDG~~vW~~ltvSlvRd~~G~p~~fI~~v~DIterK~aE~~lr~l 429 (1116)
T PRK09776 369 LSGEINSYSMEKRYYNRDGDVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERL 429 (1116)
T ss_pred HCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
T ss_conf 7699664541124673699799999899999769998448999997333779999999999