HHsearch alignment for GI: 254780468 and conserved domain: PRK09776

>PRK09776 putative sensor protein; Provisional.
Probab=99.80  E-value=2.6e-15  Score=140.67  Aligned_cols=139  Identities=14%  Similarity=0.109  Sum_probs=129.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf             53788899974888999998325938999987997899988899762899778338978988626976899999999999
Q gi|254780468|r  392 ATGYFSQGIFSDGERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSF  471 (963)
Q Consensus       392 ~~~~~~~~l~~~~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~  471 (963)
T Consensus       291 ~~r~~~~~l~~SE~rfR~~~e~saiGmAlV~~dGr~l~VN~alc~mlGYs~~ELl~l--tf~diThPdDl~~dl~~~~~L  368 (1116)
T PRK09776        291 AFRAERKHISESETRFRNAMEYSAIGMALVGTEGQWLQVNKALCQFLGYSQEELRGL--TFQQLTWPEDLNKDLQQVEKL  368 (1116)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHCCCHHHHHHC--CHHHHCCCCCHHHHHHHHHHH
T ss_conf             999888887767999999987466646998689818981699998849899998529--898816962177789999999


Q ss_pred             HCCCCCEEEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf             6078973899999986999689998722676879998899999998530577312321663
Q gi|254780468|r  472 VGYRRGRLQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCN  532 (963)
Q Consensus       472 ~~~~~~~~~~e~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~~  532 (963)
T Consensus       369 laGei~~y~lEKRyirkDG~~vW~~ltvSlvRd~~G~p~~fI~~v~DIterK~aE~~lr~l  429 (1116)
T PRK09776        369 LSGEINSYSMEKRYYNRDGDVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERL  429 (1116)
T ss_pred             HCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
T ss_conf             7699664541124673699799999899999769998448999997333779999999999