HHsearch alignment for GI: 254780468 and conserved domain: cd01948

>cd01948 EAL EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.
Probab=100.00  E-value=0  Score=403.06  Aligned_cols=236  Identities=34%  Similarity=0.603  Sum_probs=225.8

Q ss_pred             HHHHHHHHCCHHHHHCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             98743641003554114688221442100000000357755302303578889779967998999999999999988715
Q gi|254780468|r  710 DLCLAVENSELYLVYHPIIRLMDEEIVGLEALIQWDHPKWGNISSSEFMLIAEELCMIKAINLFMLERIARDIISWRDQA  789 (963)
Q Consensus       710 ~l~~al~~~~~~l~~QPi~~~~~~~~~~~E~l~R~~~~~~~~i~p~~fi~~ae~~gl~~~ld~~vl~~a~~~l~~~~~~~  789 (963)
T Consensus         2 ~l~~al~~~~~~~~~QPiv~~~~~~i~~~E~l~R~~~~~~~~~~~~~f~~~a~~~~l~~~ld~~~~~~a~~~~~~~~~~-   80 (240)
T cd01948           2 DLRRALERGEFELYYQPIVDLRTGRIVGYEALLRWRHPEGGLISPAEFIPLAEETGLIVELGRWVLEEACRQLARWQAG-   80 (240)
T ss_pred             HHHHHHHCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf             5799986798899986559989999999999994487999989999999999985976899999999999999998861-


Q ss_pred             CCCCEEEEEECCHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Q ss_conf             89984999976977943914899999999881999546999971337750999899999999988989999188776454
Q gi|254780468|r  790 NMPPIFILINIASKDLLDNELCEGMQALISKTLYSPSRIKLSFSESVVMGNPERSRLLLGRLRKIGISLTLDDFGTKCSL  869 (963)
Q Consensus       790 ~~~~~~vsINlS~~~l~~~~f~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~~~~l~~~G~~ialDdFG~g~ss  869 (963)
T Consensus        81 -~~~~~l~iNi~~~~l~~~~~~~~l~~~l~~~~~~~~~i~~Ei~E~~~~~~~~~~~~~i~~l~~~G~~iaiDdfG~~~~~  159 (240)
T cd01948          81 -GPDLRLSVNLSARQLRDPDFLDRLLELLAETGLPPRRLVLEITESALIDDLEEALATLRRLRALGVRIALDDFGTGYSS  159 (240)
T ss_pred             -CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHEEEEECCHHHHHCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf             -9983899995624154067999999999980969789687703367652699999999999864996886168998766


Q ss_pred             HHHHHHCCCCEEEEEHHHHCCCC--HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCHH
Q ss_conf             88897279989997168853999--4579999999999997798099970399899998998099899405206899989
Q gi|254780468|r  870 LSYLGYIPFDTVKFNGSLMTGST--EKRIAILRSIIPMAKNIETTIIAKDIYGEIDIKELTRMGCDYIQDSHVASPLGFN  947 (963)
Q Consensus       870 l~~L~~l~~d~iKiD~sfv~~~~--~~~~~~v~sii~~a~~lgi~viAegVE~~~~~~~l~~~G~d~~QG~~~~~P~~~~  947 (963)
T Consensus       160 ~~~l~~l~~d~iKld~~~v~~~~~~~~~~~~l~~l~~~a~~~~i~viaegVE~~~~~~~l~~lgi~~~QG~~~~~P~~~~  239 (240)
T cd01948         160 LSYLKRLPVDYLKIDRSFVRDIETDPEDRAIVRAIIALAHSLGLKVVAEGVETEEQLELLRELGCDYVQGYLFSRPLPAE  239 (240)
T ss_pred             HHHHHHCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCCCC
T ss_conf             89998678015440899997364682238999999999998499899981850999999998599996769126589999