HHsearch alignment for GI: 254780468 and conserved domain: cd01949

>cd01949 GGDEF Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.
Probab=99.94  E-value=1.7e-25  Score=222.78  Aligned_cols=157  Identities=37%  Similarity=0.614  Sum_probs=145.7

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             67753240669999999999998755338984899999767857988842778899999999999998348997699980
Q gi|254780468|r  534 FQDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDKYKKINDVLGIAVGDDVLVSLTRRIGELLKFPDILARLS  613 (963)
Q Consensus       534 ~~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~~l~~idid~fk~iN~~~G~~~gD~lL~~ia~~L~~~~~~~~~laR~~  613 (963)
T Consensus         1 ~~D~lTgL~Nr~~~~~~l~~~i~~~~~~~-~~~~l~~i~id~f~~in~~~G~~~gD~~l~~~a~~l~~~~~~~~~~~R~~   79 (158)
T cd01949           1 YTDPLTGLPNRRAFEERLERLLARARRSG-RPLALLLIDIDHFKQINDTYGHAAGDEVLKEVAERLRSSLRESDLVARLG   79 (158)
T ss_pred             CCCHHCCCHHHHHHHHHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf             99810170149999999999999998619-96899997288667888723964677999975446422478998899943


Q ss_pred             CCCEEECCCCCCCHHHHHHHHHHHHHHHHCEEEECCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf             6410202556699899999876555431011552546799999987764589889989999999999999987089740
Q gi|254780468|r  614 GNRFGIILISENNSLKIADFAIAMRKSIAMPINLLEREITVTASIGFASWTSSKITSSEMLKNAELAMYHAKHRGGNHV  692 (963)
Q Consensus       614 gdeFaill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~t~siGi~~~~~~~~~~~~ll~~Ad~Al~~Ak~~g~~~~  692 (963)
T Consensus        80 ~d~F~vl~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~siGia~~~~~~~~~~~ll~~A~~Al~~Ak~~G~~~~  157 (158)
T cd01949          80 GDEFAILLPGT-DLEEAEALAERLREAIEEPFFIDGQEIRVTASIGIATYPEDGEDAEELLRRADEALYRAKRSGRNRV  157 (158)
T ss_pred             CCEEEEEECCC-CHHHHHHHHHHHHHHHHCHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             98999996899-9999999999999998173003787655427999998079999899999999999999998883969