HHsearch alignment for GI: 254780468 and conserved domain: pfam00072
>pfam00072 Response_reg Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.
Probab=94.35 E-value=0.4 Score=26.41 Aligned_cols=105 Identities=19% Similarity=0.200 Sum_probs=75.7
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEE-EEE
Q ss_conf 0999899999999988989999188776454888972799899971688539994579999999999997798099-970
Q gi|254780468|r 839 GNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIETTII-AKD 917 (963)
Q Consensus 839 ~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi~vi-Aeg 917 (963)
T Consensus 6 D~~~~~~~l~~~L~~~g~~v--~~a~~g~~al~~~~~~~~dlvi~Di~m---P~~dG~el~~~ir~~~~--~~piI~~T~ 78 (111)
T pfam00072 6 DDPLIRELLRQLLEKEGYVV--AEADDGEEALELLKEKRPDLILLDIRM---PGMDGLELLRRIRRRPP--TTPVIVLTA 78 (111)
T ss_pred CCHHHHHHHHHHHHHCCCEE--EEECCHHHHHHHHHHCCCCEEEEECCC---CCCCHHHHHHHHHHCCC--CCEEEEEEC
T ss_conf 98999999999999889999--998999999999984799899995368---99501579999973599--980999975
Q ss_pred CCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHH
Q ss_conf 3998999989980998994052068999899999998
Q gi|254780468|r 918 IYGEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLK 954 (963)
Q Consensus 918 VE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~ 954 (963)
T Consensus 79 ~~~~~~~~~a~~~Ga~~----yl~KP~~~~~L~~~ir 111 (111)
T pfam00072 79 HGDEEDAVEALKAGAND----FLSKPFDPEELVAALR 111 (111)
T ss_pred CCCHHHHHHHHHCCCCE----EEECCCCHHHHHHHCC
T ss_conf 08999999999779877----9949999899998529