HHsearch alignment for GI: 254780468 and conserved domain: pfam00072

>pfam00072 Response_reg Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.
Probab=94.35  E-value=0.4  Score=26.41  Aligned_cols=105  Identities=19%  Similarity=0.200  Sum_probs=75.7

Q ss_pred             CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEE-EEE
Q ss_conf             0999899999999988989999188776454888972799899971688539994579999999999997798099-970
Q gi|254780468|r  839 GNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIETTII-AKD  917 (963)
Q Consensus       839 ~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi~vi-Aeg  917 (963)
T Consensus         6 D~~~~~~~l~~~L~~~g~~v--~~a~~g~~al~~~~~~~~dlvi~Di~m---P~~dG~el~~~ir~~~~--~~piI~~T~   78 (111)
T pfam00072         6 DDPLIRELLRQLLEKEGYVV--AEADDGEEALELLKEKRPDLILLDIRM---PGMDGLELLRRIRRRPP--TTPVIVLTA   78 (111)
T ss_pred             CCHHHHHHHHHHHHHCCCEE--EEECCHHHHHHHHHHCCCCEEEEECCC---CCCCHHHHHHHHHHCCC--CCEEEEEEC
T ss_conf             98999999999999889999--998999999999984799899995368---99501579999973599--980999975


Q ss_pred             CCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHH
Q ss_conf             3998999989980998994052068999899999998
Q gi|254780468|r  918 IYGEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLK  954 (963)
Q Consensus       918 VE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~  954 (963)
T Consensus        79 ~~~~~~~~~a~~~Ga~~----yl~KP~~~~~L~~~ir  111 (111)
T pfam00072        79 HGDEEDAVEALKAGAND----FLSKPFDPEELVAALR  111 (111)
T ss_pred             CCCHHHHHHHHHCCCCE----EEECCCCHHHHHHHCC
T ss_conf             08999999999779877----9949999899998529