HHsearch results for GI: 254780468 and protein with PDBid: 1byw_A
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.21 E-value=3.6e-10 Score=97.45 Aligned_cols=106 Identities=8% Similarity=0.004 Sum_probs=83.8
Q ss_pred CEEEEEE---CCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCE
Q ss_conf 3899998---7997899988899762899778338978988626976899999999999607897389999998699968
Q gi|254780468|r 416 DIVWDWD---IVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEFRVRAADNQF 492 (963)
Q Consensus 416 ~~i~~~d---~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e~r~r~~dG~~ 492 (963)
.-.+.+| +++.++++||++++++||+++++.|....+.-..+|++.......+...+.. +..+..|++.+++||+.
T Consensus 2 ~~~~i~da~~~D~~I~~vN~a~~~~~Gy~~~e~~gk~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~e~~~~~~dg~~ 80 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLG-AEERKVEIAFYRKDGSC 80 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHT-TCCEEEEEEEECTTSCE
T ss_pred CCEEEECCCCCCCEEEEECHHHHHHHCCCHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHC-CCCCEEEEEEECCCCCE
T ss_conf 60999838899897999988999987978678448974115765102317778888887752-36420168899489989
Q ss_pred EEEEEEEEEEECCCCCEEEEEEEEEECHHH
Q ss_conf 999872267687999889999999853057
Q gi|254780468|r 493 HWMIIRIRPMSNSNGDILRYIGIANDITEQ 522 (963)
Q Consensus 493 ~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~ 522 (963)
+|+..++.|++|++|++.+++++++||||+
T Consensus 81 ~w~~~~~~pi~d~~G~i~~~v~~~~DITeR 110 (110)
T 1byw_A 81 FLCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEEECCCC
T ss_conf 999989899998998999999999978899