HHsearch results for GI: 254780468 and protein with PDBid: 1n9l_A
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.24 E-value=3.1e-10 Score=98.06 Aligned_cols=106 Identities=11% Similarity=0.139 Sum_probs=86.8
Q ss_pred CCCCEEEEEE---CCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC
Q ss_conf 2593899998---7997899988899762899778338978988626976899999999999607897389999998699
Q gi|254780468|r 413 GSGDIVWDWD---IVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEFRVRAAD 489 (963)
Q Consensus 413 ~s~~~i~~~d---~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e~r~r~~d 489 (963)
+..++++..| +++.++++|+++++++||+++++.|.. +..+.+|++.+.....+...+.+ +..++.|++.+++|
T Consensus 1 ~~~~~~vi~Da~~pd~~Ii~vN~a~~~~~Gy~~~eliG~~--~~~l~~~~~~~~~~~~~~~~l~~-g~~~~~e~~~~~kd 77 (109)
T 1n9l_A 1 GLRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHN--CRFLQGEGTDPKEVQKIRDAIKK-GEACSVRLLNYRKD 77 (109)
T ss_dssp CCSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSC--GGGGCCTTCCHHHHHHHHHHHHH-TCCEEEEEEEECTT
T ss_pred CCCCCEEEEECCCCCCEEEEECHHHHHHHCCCHHHHCCCC--HHHCCCCCCCHHHHHHHHHHHCC-CCEEEEEEEEECCC
T ss_conf 9765199995989989699997899998895989975997--54121655798999999875506-96699999988799
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEECHH
Q ss_conf 96899987226768799988999999985305
Q gi|254780468|r 490 NQFHWMIIRIRPMSNSNGDILRYIGIANDITE 521 (963)
Q Consensus 490 G~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~ 521 (963)
|+.+|++.+..|++|++|++.+++++.+|||+
T Consensus 78 G~~~~~~~~~~pv~d~~G~~~~~i~~~~DITa 109 (109)
T 1n9l_A 78 GTPFWNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp SCEEEEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEECCC
T ss_conf 98999999999999999899999999998297