HHsearch results for GI: 254780468 and protein with PDBid: 1qkk_A

>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=93.69  E-value=0.31  Score=25.47  Aligned_cols=106  Identities=12%  Similarity=0.139  Sum_probs=75.7

Q ss_pred             CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCE-EEEEE
Q ss_conf             09998999999999889899991887764548889727998999716885399945799999999999977980-99970
Q gi|254780468|r  839 GNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIETT-IIAKD  917 (963)
Q Consensus       839 ~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi~-viAeg  917 (963)
                      +++.....+...|+..|+++.  -+.+|...+..+..-++|.|=+|-.   --+-+.-.+++.+-....  ++. ++..|
T Consensus        11 Dd~~~~~~l~~~L~~~g~~v~--~a~~~~~al~~l~~~~~dliilD~~---mP~~dGle~~~~ir~~~~--~~pvI~lT~   83 (155)
T 1qkk_A           11 DDRDLRKAMQQTLELAGFTVS--SFASATEALAGLSADFAGIVISDIR---MPGMDGLALFRKILALDP--DLPMILVTG   83 (155)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEE--EESCHHHHHHTCCTTCCSEEEEESC---CSSSCHHHHHHHHHHHCT--TSCEEEEEC
T ss_pred             CCHHHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHCCCCCEEECCCC---CCCCCHHHHHHHHHHHCC--CCCEEEEEC
T ss_conf             999999999999998799899--9789999999853269877765457---899989999999997298--994898979


Q ss_pred             CCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHH
Q ss_conf             39989999899809989940520689998999999985
Q gi|254780468|r  918 IYGEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLKE  955 (963)
Q Consensus       918 VE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~~  955 (963)
                      -.+.+......+.|++.    |+.||...+++...+++
T Consensus        84 ~~~~~~~~~a~~~Ga~d----yl~KP~~~~~L~~~i~~  117 (155)
T 1qkk_A           84 HGDIPMAVQAIQDGAYD----FIAKPFAADRLVQSARR  117 (155)
T ss_dssp             GGGHHHHHHHHHTTCCE----EEESSCCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCCE----EEECCCCHHHHHHHHHH
T ss_conf             89999999999869988----97599999999999999