HHsearch results for GI: 254780468 and protein with PDBid: 1qkk_A
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=93.69 E-value=0.31 Score=25.47 Aligned_cols=106 Identities=12% Similarity=0.139 Sum_probs=75.7
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCE-EEEEE
Q ss_conf 09998999999999889899991887764548889727998999716885399945799999999999977980-99970
Q gi|254780468|r 839 GNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIETT-IIAKD 917 (963)
Q Consensus 839 ~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi~-viAeg 917 (963)
+++.....+...|+..|+++. -+.+|...+..+..-++|.|=+|-. --+-+.-.+++.+-.... ++. ++..|
T Consensus 11 Dd~~~~~~l~~~L~~~g~~v~--~a~~~~~al~~l~~~~~dliilD~~---mP~~dGle~~~~ir~~~~--~~pvI~lT~ 83 (155)
T 1qkk_A 11 DDRDLRKAMQQTLELAGFTVS--SFASATEALAGLSADFAGIVISDIR---MPGMDGLALFRKILALDP--DLPMILVTG 83 (155)
T ss_dssp SCHHHHHHHHHHHHHTTCEEE--EESCHHHHHHTCCTTCCSEEEEESC---CSSSCHHHHHHHHHHHCT--TSCEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHCCCCCEEECCCC---CCCCCHHHHHHHHHHHCC--CCCEEEEEC
T ss_conf 999999999999998799899--9789999999853269877765457---899989999999997298--994898979
Q ss_pred CCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 39989999899809989940520689998999999985
Q gi|254780468|r 918 IYGEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLKE 955 (963)
Q Consensus 918 VE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~~ 955 (963)
-.+.+......+.|++. |+.||...+++...+++
T Consensus 84 ~~~~~~~~~a~~~Ga~d----yl~KP~~~~~L~~~i~~ 117 (155)
T 1qkk_A 84 HGDIPMAVQAIQDGAYD----FIAKPFAADRLVQSARR 117 (155)
T ss_dssp GGGHHHHHHHHHTTCCE----EEESSCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCE----EEECCCCHHHHHHHHHH
T ss_conf 89999999999869988----97599999999999999