HHsearch results for GI: 254780468 and protein with PDBid: 2r78_A
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.25 E-value=6.3e-11 Score=103.59 Aligned_cols=115 Identities=16% Similarity=0.198 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 89997488899999832593899998799789998889976289977833897898862697689999999999960789
Q gi|254780468|r 397 SQGIFSDGERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRR 476 (963)
Q Consensus 397 ~~~l~~~~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~ 476 (963)
++++..+.+|++.+++++++++|.+|.+|+++++|+++++++|++++++.+. .|.+++||+|++.....++.+..+
T Consensus 3 ~e~l~~~e~~fr~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~el~g~--~~~~~~~~~~~~~~~~~~~~~~~~-- 78 (117)
T 2r78_A 3 TENLYFQSNAYRALFEHAIDGIFIMDAEGHYLDVNPAICSAIGYTRDEFLAL--DWGVLSRGVDSGWAAASLARIVGG-- 78 (117)
T ss_dssp CCSHHHHHHHHHHHHHHCSSEEEEECTTSBEEEECHHHHHHHCCCHHHHTTC--BTTTTTTCSTTSHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEHHHHHHHHCCCHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHCC--
T ss_conf 8999999999999997287206999399989998599999879397896398--577764213467899999999739--
Q ss_pred CEEEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECH
Q ss_conf 73899999986999689998722676879998899999998530
Q gi|254780468|r 477 GRLQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDIT 520 (963)
Q Consensus 477 ~~~~~e~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt 520 (963)
+....|++++++||+.+|++.++.++. +|+ ++|+.+|||
T Consensus 79 ~~~~~e~~~~~~dG~~~~v~~~~~~i~--d~~---~~~i~~DIT 117 (117)
T 2r78_A 79 EPLREERTVWTRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp CCEEEEEEEECTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred CCEEEEEEEECCCCCEEEEEEEEEEEE--CCE---EEEEEEECC
T ss_conf 947999999938997999999999987--897---999999794