HHsearch results for GI: 254780468 and protein with PDBid: 2v0u_A
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal transduction, phototropin1; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.43 E-value=3.6e-12 Score=113.65 Aligned_cols=121 Identities=10% Similarity=0.086 Sum_probs=99.8
Q ss_pred HHHHHCCCCEEEEEE---CCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEE
Q ss_conf 999832593899998---79978999888997628997783389789886269768999999999996078973899999
Q gi|254780468|r 408 SLAVLGSGDIVWDWD---IVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEFR 484 (963)
Q Consensus 408 ~~al~~s~~~i~~~d---~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e~r 484 (963)
+.+++++.+++..+| +++.++|+|+++++++||+++++.|.. +..+.+|++.......+...+... ..+..|++
T Consensus 5 ~~~~~~~~~~~vi~d~~~~d~~I~y~N~~~~~~~G~~~~el~gk~--~~~l~~~~~~~~~~~~~~~~l~~~-~~~~~e~~ 81 (146)
T 2v0u_A 5 ATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRN--CRFLQGPETDRATVRKIRDAIDNQ-TEVTVQLI 81 (146)
T ss_dssp CCTGGGSSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSC--GGGGCCTTSCHHHHHHHHHHHHTT-CCEEEEEE
T ss_pred HHHHHHCCCCEEEEECCCCCCEEEEECHHHHHHHCCCHHHHCCCC--HHHHCCCCCCHHHHHHHHHHHHCC-CCCEEEEE
T ss_conf 999981998199994889989799995899998892999982899--889745478899999999999809-97358998
Q ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHH
Q ss_conf 98699968999872267687999889999999853057731232166
Q gi|254780468|r 485 VRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILC 531 (963)
Q Consensus 485 ~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~ 531 (963)
.+++||..+|++.++.|+.+++|++.+++++++|||++++++++++.
T Consensus 82 ~~~kdG~~~w~~~~~~pi~d~~g~~~~~i~~~~DITe~~~~~~e~e~ 128 (146)
T 2v0u_A 82 NYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAAEREG 128 (146)
T ss_dssp EECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHHHHHH
T ss_pred EEECCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHHHH
T ss_conf 78518978999999999997998999999999978899999999999