HHsearch results for GI: 254780468 and protein with PDBid: 3a0r_A
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transferase, two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=98.21 E-value=2.2e-06 Score=66.97 Aligned_cols=113 Identities=13% Similarity=0.088 Sum_probs=82.2
Q ss_pred HHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC
Q ss_conf 99832593899998799789998889976289977833897898862697689999999999960789738999999869
Q gi|254780468|r 409 LAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEFRVRAA 488 (963)
Q Consensus 409 ~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e~r~r~~ 488 (963)
.++++.+++|+..|.++.++++|+++++++|++++++.|.. +.+..++++ .....+...+..... .....+
T Consensus 12 ~il~~~~~~i~~~d~~g~I~~~N~aa~~l~G~~~~~~~G~~--~~~l~~~~~---~~~~~~~~~~~~~~~----~~~~~~ 82 (349)
T 3a0r_A 12 SILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRR--LKDLPDFEE---IGSVAESVFENKEPV----FLNFYK 82 (349)
T ss_dssp SSGGGSSSEEEEEESSSBCSCBCHHHHHHHSCCSTTTTTCB--STTSTTTTH---HHHHHHHHHHHCCCC----EEECCC
T ss_pred HHHHHHHHHHEEECCCCEEEHHHHHHHHHHCCCHHHHCCCC--HHHCCCHHH---HHHHHHHHHHCCCEE----EEEEEE
T ss_conf 99986547748998969051715999999782989985998--789479788---999999998258808----999850
Q ss_pred CCCEEEEEEEEEEEECCCCC-EEEEEEEEEECHHHHHHHHHHHH
Q ss_conf 99689998722676879998-89999999853057731232166
Q gi|254780468|r 489 DNQFHWMIIRIRPMSNSNGD-ILRYIGIANDITEQKKSLEGILC 531 (963)
Q Consensus 489 dG~~~w~~~~~~~i~~~~g~-~~~~~g~~~DIt~~~~~~~~l~~ 531 (963)
+|. +|+.++..|+.+.++. +.+++.+++|||+++++++++.+
T Consensus 83 ~~~-~~~~~~~~p~~~~~~~~~~g~v~~~~DITe~~~~e~~l~~ 125 (349)
T 3a0r_A 83 FGE-RYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKR 125 (349)
T ss_dssp BTT-BCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTTH
T ss_pred CCC-EEEEEEEEEEECCCCCEEEEEEEEEEEHHHHHHHHHHHHH
T ss_conf 783-5889999999838987788999999834399999999999