HHsearch results for GI: 254780468 and protein with PDBid: 3a0r_A

>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transferase, two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=98.21  E-value=2.2e-06  Score=66.97  Aligned_cols=113  Identities=13%  Similarity=0.088  Sum_probs=82.2

Q ss_pred             HHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC
Q ss_conf             99832593899998799789998889976289977833897898862697689999999999960789738999999869
Q gi|254780468|r  409 LAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEFRVRAA  488 (963)
Q Consensus       409 ~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e~r~r~~  488 (963)
                      .++++.+++|+..|.++.++++|+++++++|++++++.|..  +.+..++++   .....+...+.....    .....+
T Consensus        12 ~il~~~~~~i~~~d~~g~I~~~N~aa~~l~G~~~~~~~G~~--~~~l~~~~~---~~~~~~~~~~~~~~~----~~~~~~   82 (349)
T 3a0r_A           12 SILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRR--LKDLPDFEE---IGSVAESVFENKEPV----FLNFYK   82 (349)
T ss_dssp             SSGGGSSSEEEEEESSSBCSCBCHHHHHHHSCCSTTTTTCB--STTSTTTTH---HHHHHHHHHHHCCCC----EEECCC
T ss_pred             HHHHHHHHHHEEECCCCEEEHHHHHHHHHHCCCHHHHCCCC--HHHCCCHHH---HHHHHHHHHHCCCEE----EEEEEE
T ss_conf             99986547748998969051715999999782989985998--789479788---999999998258808----999850


Q ss_pred             CCCEEEEEEEEEEEECCCCC-EEEEEEEEEECHHHHHHHHHHHH
Q ss_conf             99689998722676879998-89999999853057731232166
Q gi|254780468|r  489 DNQFHWMIIRIRPMSNSNGD-ILRYIGIANDITEQKKSLEGILC  531 (963)
Q Consensus       489 dG~~~w~~~~~~~i~~~~g~-~~~~~g~~~DIt~~~~~~~~l~~  531 (963)
                      +|. +|+.++..|+.+.++. +.+++.+++|||+++++++++.+
T Consensus        83 ~~~-~~~~~~~~p~~~~~~~~~~g~v~~~~DITe~~~~e~~l~~  125 (349)
T 3a0r_A           83 FGE-RYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKR  125 (349)
T ss_dssp             BTT-BCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTTH
T ss_pred             CCC-EEEEEEEEEEECCCCCEEEEEEEEEEEHHHHHHHHHHHHH
T ss_conf             783-5889999999838987788999999834399999999999