HHsearch results for GI: 254780468 and protein with PDBid: 3f6p_A

>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} PDB: 2zwm_A
Probab=91.22  E-value=0.61  Score=23.16  Aligned_cols=106  Identities=19%  Similarity=0.196  Sum_probs=78.8

Q ss_pred             CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEE-EEE
Q ss_conf             0999899999999988989999188776454888972799899971688539994579999999999997798099-970
Q gi|254780468|r  839 GNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIETTII-AKD  917 (963)
Q Consensus       839 ~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi~vi-Aeg  917 (963)
                      +|+.........|++.|+.+..  +.+|-..+..+.+-++|.|=+|-.+ .  +-+.-.+++.+-   +.-+..+| ..+
T Consensus        10 Dd~~~~~~l~~~L~~~g~~v~~--a~~~~~al~~l~~~~~dlii~D~~m-P--~~~G~e~~~~~r---~~~~~~ii~lt~   81 (120)
T 3f6p_A           10 DEKPIADILEFNLRKEGYEVHC--AHDGNEAVEMVEELQPDLILLDIML-P--NKDGVEVCREVR---KKYDMPIIMLTA   81 (120)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEE--ESSHHHHHHHHHTTCCSEEEEETTS-T--TTHHHHHHHHHH---TTCCSCEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCEEEE--ECCHHHHHHHHHCCCCCEEEEECCC-C--CCCHHHHHHHHH---HCCCCCEEEEEC
T ss_conf             9999999999999988999999--8999999999971899999982999-9--999999999998---168995899976


Q ss_pred             CCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             399899998998099899405206899989999999851
Q gi|254780468|r  918 IYGEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLKER  956 (963)
Q Consensus       918 VE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~~~  956 (963)
                      ..+.+......+.|++.    |+.||...+++...++..
T Consensus        82 ~~~~~~~~~a~~~Ga~~----yl~KP~~~~~L~~~i~~~  116 (120)
T 3f6p_A           82 KDSEIDKVIGLEIGADD----YVTKPFSTRELLARVKAN  116 (120)
T ss_dssp             SSCHHHHHHHHHTTCCE----EEEESCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCCE----EEECCCCHHHHHHHHHHH
T ss_conf             79999999999759998----997999999999999999