HHsearch results for GI: 254780468 and protein with PDBid: 3f6p_A
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} PDB: 2zwm_A
Probab=91.22 E-value=0.61 Score=23.16 Aligned_cols=106 Identities=19% Similarity=0.196 Sum_probs=78.8
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEE-EEE
Q ss_conf 0999899999999988989999188776454888972799899971688539994579999999999997798099-970
Q gi|254780468|r 839 GNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIETTII-AKD 917 (963)
Q Consensus 839 ~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi~vi-Aeg 917 (963)
+|+.........|++.|+.+.. +.+|-..+..+.+-++|.|=+|-.+ . +-+.-.+++.+- +.-+..+| ..+
T Consensus 10 Dd~~~~~~l~~~L~~~g~~v~~--a~~~~~al~~l~~~~~dlii~D~~m-P--~~~G~e~~~~~r---~~~~~~ii~lt~ 81 (120)
T 3f6p_A 10 DEKPIADILEFNLRKEGYEVHC--AHDGNEAVEMVEELQPDLILLDIML-P--NKDGVEVCREVR---KKYDMPIIMLTA 81 (120)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEE--ESSHHHHHHHHHTTCCSEEEEETTS-T--TTHHHHHHHHHH---TTCCSCEEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE--ECCHHHHHHHHHCCCCCEEEEECCC-C--CCCHHHHHHHHH---HCCCCCEEEEEC
T ss_conf 9999999999999988999999--8999999999971899999982999-9--999999999998---168995899976
Q ss_pred CCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 399899998998099899405206899989999999851
Q gi|254780468|r 918 IYGEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLKER 956 (963)
Q Consensus 918 VE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~~~ 956 (963)
..+.+......+.|++. |+.||...+++...++..
T Consensus 82 ~~~~~~~~~a~~~Ga~~----yl~KP~~~~~L~~~i~~~ 116 (120)
T 3f6p_A 82 KDSEIDKVIGLEIGADD----YVTKPFSTRELLARVKAN 116 (120)
T ss_dssp SSCHHHHHHHHHTTCCE----EEEESCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCE----EEECCCCHHHHHHHHHHH
T ss_conf 79999999999759998----997999999999999999