HHsearch results for GI: 254780468 and protein with PDBid: 3h9w_A
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.90A {Marinobacter aquaeolei VT8}
Probab=99.55 E-value=3.9e-13 Score=121.38 Aligned_cols=110 Identities=17% Similarity=0.340 Sum_probs=98.9
Q ss_pred CCCEEEEEECC-CCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCE
Q ss_conf 59389999879-97899988899762899778338978988626976899999999999607897389999998699968
Q gi|254780468|r 414 SGDIVWDWDIV-RDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEFRVRAADNQF 492 (963)
Q Consensus 414 s~~~i~~~d~~-~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e~r~r~~dG~~ 492 (963)
+.++.|++|++ ++..|+||++++++|++++++.+ ...|.+.+||+|++.+...++....+. ...+.|+|+++++|.+
T Consensus 2 t~~i~W~~d~~t~~~~yvn~~~~~l~G~~~~e~~~-~~~~~~~i~ped~~~~~~~~~~~~~~~-~~~~~e~ri~~~~G~~ 79 (115)
T 3h9w_A 2 TKAIPWKINWQTMAFEYIGPQIEALLGWPQGSWKS-VEDWATRMHPEDQEWVVNFCVKQSECG-VDHEADYRALHRDGHY 79 (115)
T ss_dssp -CCEEEEEETTTTEEEEECTHHHHHHCSCGGGCCB-HHHHHHSBCHHHHHHHHHHHHHHHHTT-CCEEEEEEEECTTSCE
T ss_pred CCEEEEEEECCCCEEEEECHHHHHHHCCCHHHHCC-CHHHHHHCCHHHHHHHHHHHHHHHHCC-CCEEEEEEEECCCCCE
T ss_conf 97799999999998999998999988879999879-437877239978999999999998629-8268999975178634
Q ss_pred EEEEEEEEEEECCCCCEEEEEEEEEECHHHHHH
Q ss_conf 999872267687999889999999853057731
Q gi|254780468|r 493 HWMIIRIRPMSNSNGDILRYIGIANDITEQKKS 525 (963)
Q Consensus 493 ~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~ 525 (963)
+|+.+++.+++|++|++.+++|+.+||||+...
T Consensus 80 ~~~~~~~~~~~d~~G~~~~~~G~~~DITee~~~ 112 (115)
T 3h9w_A 80 VWIRDVVHVVRDDSGEVEALIGFMFDISLEHHH 112 (115)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECGGGGC-
T ss_pred EEEEECEEEEECCCCCEEEEEEEEEEECCCCCC
T ss_conf 766310047999998999999999989878766