HHsearch results for GI: 254780468 and protein with PDBid: 3i42_A
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT}
Probab=95.20 E-value=0.078 Score=30.32 Aligned_cols=108 Identities=13% Similarity=0.135 Sum_probs=74.4
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEE-EE
Q ss_conf 09998999999999889899991887764548889727998999716885399945799999999999977980999-70
Q gi|254780468|r 839 GNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIETTIIA-KD 917 (963)
Q Consensus 839 ~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi~viA-eg 917 (963)
+|......+...|+..|+++.. ..+|-..+..+++-++|.|=+|-.+ .+ -+.-.+++.+-.....-++.+|+ .+
T Consensus 11 D~~~~~~~l~~~L~~~G~~v~~--a~~g~eAl~~l~~~~~dlillD~~m-P~--~~G~el~~~lr~~~~~~~~pii~lt~ 85 (127)
T 3i42_A 11 DYQAAAETFKELLEMLGFQADY--VMSGTDALHAMSTRGYDAVFIDLNL-PD--TSGLALVKQLRALPMEKTSKFVAVSG 85 (127)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEE--ESSHHHHHHHHHHSCCSEEEEESBC-SS--SBHHHHHHHHHHSCCSSCCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEE--ECCHHHHHHHHHCCCCCEEEECCCC-CC--CCHHHHHHHHHHCCCCCCCEEEEEEC
T ss_conf 7899999999999987999999--8999999999980899999862789-99--84599999998476789994999978
Q ss_pred CCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 399899998998099899405206899989999999851
Q gi|254780468|r 918 IYGEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLKER 956 (963)
Q Consensus 918 VE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~~~ 956 (963)
-...+......+ |++ + |+.||...+++.+.+++-
T Consensus 86 ~~~~~~~~~~~~-g~~---~-~L~KP~~~~~L~~~l~~l 119 (127)
T 3i42_A 86 FAKNDLGKEACE-LFD---F-YLEKPIDIASLEPILQSI 119 (127)
T ss_dssp C-CTTCCHHHHH-HCS---E-EEESSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHH-CCC---E-EEECCCCHHHHHHHHHHH
T ss_conf 887999999971-787---8-997989999999999980