HHsearch results for GI: 254780468 and protein with PDBid: 3icl_A

>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=99.93  E-value=1.7e-24  Score=212.97  Aligned_cols=167  Identities=35%  Similarity=0.519  Sum_probs=154.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf             77532406699999999999987553389848999997678579888427788999999999999983489976999806
Q gi|254780468|r  535 QDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDKYKKINDVLGIAVGDDVLVSLTRRIGELLKFPDILARLSG  614 (963)
Q Consensus       535 ~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~~l~~idid~fk~iN~~~G~~~gD~lL~~ia~~L~~~~~~~~~laR~~g  614 (963)
                      .|++||||||++|.++++..++++++.. .++++++|+||+|+.+|++||+..+|++++.++++|++.+++.+.+||+++
T Consensus         1 iD~lTGL~Nr~~f~~~l~~~l~~~~~~~-~~~~l~~i~i~~~~~i~~~~G~~~~d~~l~~va~~l~~~~~~~~~v~r~~~   79 (171)
T 3icl_A            1 MDTVTGLPNRQLFCDRLLQALAAHERDG-NPVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAVRDGDTVARIGG   79 (171)
T ss_dssp             CCTTTCCCCHHHHHHHHHHHHHHCCCTT-SCCEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHSCTTCEEEEETT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHCC-CCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             9021273348999999999999987539-949999998418889888608267778999999999987799869999758


Q ss_pred             CCEEECCCCCCCHHHHHHHHHHHHHHHHCEEEECCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             41020255669989999987655543101155254679999998776458988998999999999999998708974052
Q gi|254780468|r  615 NRFGIILISENNSLKIADFAIAMRKSIAMPINLLEREITVTASIGFASWTSSKITSSEMLKNAELAMYHAKHRGGNHVES  694 (963)
Q Consensus       615 deFaill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~t~siGi~~~~~~~~~~~~ll~~Ad~Al~~Ak~~g~~~~~~  694 (963)
                      ++|+++++...++++.....+++......++...+....+++++|++.++.++.++++++++|+.||+.||++|+|++..
T Consensus        80 ~~F~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Gia~~~~~~~~~~~ll~~A~~AL~~Ak~~g~n~~~~  159 (171)
T 3icl_A           80 DKFTILLNGAKDTLNGALVAQKILDGLAQPFVFGAQQIVISVSIGIAVSPADGETMEQLLRNADTAMYHAKSRGKNNYQF  159 (171)
T ss_dssp             TEEEEEESSCTTSTTTHHHHHHHHHHHTSCEEETTEEECCCEEEEEEETTTTCSSHHHHHHHHHHHHHHHHHHCSSEEEE
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             85888669998499999999999999836001046564488899985278999999999999999999999849998999


Q ss_pred             CCCCCCCH
Q ss_conf             01111106
Q gi|254780468|r  695 FRVSSFRS  702 (963)
Q Consensus       695 ~~~~~~~~  702 (963)
                      |++.+...
T Consensus       160 y~~~m~~~  167 (171)
T 3icl_A          160 FSPELEHH  167 (171)
T ss_dssp             CCC-----
T ss_pred             ECHHHCCC
T ss_conf             88787785