HHsearch results for GI: 254780468 and protein with PDBid: 3icl_A
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=99.93 E-value=1.7e-24 Score=212.97 Aligned_cols=167 Identities=35% Similarity=0.519 Sum_probs=154.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 77532406699999999999987553389848999997678579888427788999999999999983489976999806
Q gi|254780468|r 535 QDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDKYKKINDVLGIAVGDDVLVSLTRRIGELLKFPDILARLSG 614 (963)
Q Consensus 535 ~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~~l~~idid~fk~iN~~~G~~~gD~lL~~ia~~L~~~~~~~~~laR~~g 614 (963)
.|++||||||++|.++++..++++++.. .++++++|+||+|+.+|++||+..+|++++.++++|++.+++.+.+||+++
T Consensus 1 iD~lTGL~Nr~~f~~~l~~~l~~~~~~~-~~~~l~~i~i~~~~~i~~~~G~~~~d~~l~~va~~l~~~~~~~~~v~r~~~ 79 (171)
T 3icl_A 1 MDTVTGLPNRQLFCDRLLQALAAHERDG-NPVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAVRDGDTVARIGG 79 (171)
T ss_dssp CCTTTCCCCHHHHHHHHHHHHHHCCCTT-SCCEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHSCTTCEEEEETT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCC-CCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 9021273348999999999999987539-949999998418889888608267778999999999987799869999758
Q ss_pred CCEEECCCCCCCHHHHHHHHHHHHHHHHCEEEECCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 41020255669989999987655543101155254679999998776458988998999999999999998708974052
Q gi|254780468|r 615 NRFGIILISENNSLKIADFAIAMRKSIAMPINLLEREITVTASIGFASWTSSKITSSEMLKNAELAMYHAKHRGGNHVES 694 (963)
Q Consensus 615 deFaill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~t~siGi~~~~~~~~~~~~ll~~Ad~Al~~Ak~~g~~~~~~ 694 (963)
++|+++++...++++.....+++......++...+....+++++|++.++.++.++++++++|+.||+.||++|+|++..
T Consensus 80 ~~F~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Gia~~~~~~~~~~~ll~~A~~AL~~Ak~~g~n~~~~ 159 (171)
T 3icl_A 80 DKFTILLNGAKDTLNGALVAQKILDGLAQPFVFGAQQIVISVSIGIAVSPADGETMEQLLRNADTAMYHAKSRGKNNYQF 159 (171)
T ss_dssp TEEEEEESSCTTSTTTHHHHHHHHHHHTSCEEETTEEECCCEEEEEEETTTTCSSHHHHHHHHHHHHHHHHHHCSSEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 85888669998499999999999999836001046564488899985278999999999999999999999849998999
Q ss_pred CCCCCCCH
Q ss_conf 01111106
Q gi|254780468|r 695 FRVSSFRS 702 (963)
Q Consensus 695 ~~~~~~~~ 702 (963)
|++.+...
T Consensus 160 y~~~m~~~ 167 (171)
T 3icl_A 160 FSPELEHH 167 (171)
T ss_dssp CCC-----
T ss_pred ECHHHCCC
T ss_conf 88787785