HHsearch results for GI: 254780468 and protein with PDBid: 3kx0_X
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.07 E-value=9.2e-10 Score=94.22 Aligned_cols=131 Identities=10% Similarity=0.020 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEE-CCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 9997488899999832593899998-799789998889976289977833897898862697689999999999960789
Q gi|254780468|r 398 QGIFSDGERQSLAVLGSGDIVWDWD-IVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRR 476 (963)
Q Consensus 398 ~~l~~~~er~~~al~~s~~~i~~~d-~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~ 476 (963)
+....+.|+++.++++++++|+..| .++.++++|+++.+++|+. ++.|.. +.+..++.+.......++...+...
T Consensus 30 ~~~~~~~e~~r~l~e~~p~~i~~~d~~d~~i~~~N~a~~~~~G~~--e~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (185)
T 3kx0_X 30 DKTVGAAEDVRRIFEHIPAILVGLEGPDHRFVAVNAAYRGFSPLL--DTVGQP--AREVYPELEGQQIYEMLDRVYQTGE 105 (185)
T ss_dssp HHHTCCHHHHHHHHHHCSSEEEEEETTTTEEEEECHHHHHHCCCC--SCTTSB--HHHHCTTSCSSSSHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHCCHHHEEEEECCCCEEEEECHHHHHHHCHH--HHHCCC--CCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 888751999999996505457999999998998829999871959--881873--3235761456889999999985078
Q ss_pred CEEEE----EEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf 73899----999986999689998722676879998899999998530577312321663
Q gi|254780468|r 477 GRLQY----EFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCN 532 (963)
Q Consensus 477 ~~~~~----e~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~~ 532 (963)
..... +.+....+|..+|+.++..|+.+.+|++.+++++.+|||++|+++++|...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~ae~~l~~~ 165 (185)
T 3kx0_X 106 PQSGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAEAR 165 (185)
T ss_dssp CEEEEEEEEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC-----
T ss_pred CCEEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf 730036889997169875058999985666627895544205662278999999999999