HHsearch results for GI: 254780468 and protein with PDBid: 3nja_A
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.76 E-value=2.6e-17 Score=155.02 Aligned_cols=121 Identities=21% Similarity=0.297 Sum_probs=113.7
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 88899999832593899998799789998889976289977833897898862697689999999999960789738999
Q gi|254780468|r 403 DGERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYE 482 (963)
Q Consensus 403 ~~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e 482 (963)
+.++++.|.+.++.|+|+||+.++.+++|++++++||+++++...+...|.+.|||+|++++.+.++..+.+.+ .++.+
T Consensus 5 se~~l~~a~~~A~~G~w~~d~~~~~~~~s~~~~~l~G~~~~~~~~~~~~~~~~Ihp~D~~~~~~~~~~~l~~~~-~~~~e 83 (125)
T 3nja_A 5 AEKLLHTAESDAGIGSWVLHMESGRLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGDR-PFDVE 83 (125)
T ss_dssp ------------CCEEEEEETTTTEEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSCC-CEEEE
T ss_pred HHHHHHHHHHHCCEEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCC-CEEEE
T ss_conf 99999999987491999999799989997899988491978936899999875699899999999998530256-40499
Q ss_pred EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHH
Q ss_conf 999869996899987226768799988999999985305773
Q gi|254780468|r 483 FRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKK 524 (963)
Q Consensus 483 ~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~ 524 (963)
||++++||+++|+.+++.++.+++|++.+++|++.|||++|+
T Consensus 84 ~Ri~~~dG~~~wv~~~~~~~~d~~G~~~~~~G~~~DITerK~ 125 (125)
T 3nja_A 84 YRIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCHHCC
T ss_conf 999758987899999999999999799999999998826419