RPSBLAST alignment of GI: 254780468 and protein with PDBid: 1wa9
>1wa9_A Period circadian protein; PAS domain, circadian rhythm, clock protein, phosphorylation, polymorphism; 3.15A {Drosophila melanogaster} PDB: 3gec_A Length = 368
Score = 41.2 bits (95), Expect = 0.001
Identities = 14/149 (9%), Positives = 34/149 (22%), Gaps = 3/149 (2%)
Query: 405 ERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHIND--RD 462
+ S + LG + G + ++
Sbjct: 148 VPDEILSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKE 207
Query: 463 NFRTILDSFVGYRRGRLQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQ 522
+ T++ +R + + + N L ++ + + +
Sbjct: 208 TYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQG 267
Query: 523 KKSLEGILCNAFQDNLTGIPNRQSFLDRL 551
K + A L QS R+
Sbjct: 268 PK-QCNVFEAAPTCKLKISEEAQSRNTRI 295