RPSBLAST alignment of GI: 254780468 and protein with PDBid: 3clo
>3clo_A Transcriptional regulator; NP_811094.1, bacterial regulatory proteins, LUXR family, structural genomics; 2.04A {Bacteroides thetaiotaomicron vpi-5482} Length = 258
Score = 40.0 bits (93), Expect = 0.003
Identities = 20/135 (14%), Positives = 42/135 (31%), Gaps = 18/135 (13%)
Query: 407 QSLAVLGSGDIVWDWDIVRDR-VTTTPDIATILGLASGSMHGPIRN------WLPYIHIN 459
+SL + +G D+ + T A LGL + + IH
Sbjct: 36 RSLTEV-NGGCAVISDLSNRKSYVTVHPWANFLGLTPEEAALSVIDSMDEDCIYRRIHPE 94
Query: 460 DRDNFRTILDSFV---------GYRRGRLQYEFRVRAADNQFHWMIIRIRPMSN-SNGDI 509
D R + F + R + R+ + ++ ++ M N G++
Sbjct: 95 DLVEKRLMEYKFFQKTFSMSPGERLKYRGRCRLRMMNEKGVYQYIDNLVQIMQNTPAGNV 154
Query: 510 LRYIGIANDITEQKK 524
+ + +Q+
Sbjct: 155 WLIFCLYSLSADQRP 169