RPSBLAST alignment of GI: 254780468 and protein with PDBid: 3f1p
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 2b02_A* 2k7s_A 2a24_B Length = 121
Score = 45.9 bits (108), Expect = 5e-05
Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 3/94 (3%)
Query: 432 PDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEFRVRAADNQ 491
+G + +N + + H D+ R V + L FR R+ + +
Sbjct: 29 HRCVATVGYQPQELL--GKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNQE 86
Query: 492 FHWMIIRIRPMSNS-NGDILRYIGIANDITEQKK 524
+ WM N + +I I ++ +
Sbjct: 87 WLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120