RPSBLAST alignment of GI: 254780468 and protein with PDBid: 3gdi

>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus} Length = 309
 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 17/202 (8%), Positives = 46/202 (22%), Gaps = 1/202 (0%)

Query: 355 WMAITKRLDNDIIQPALVGGLVLIVILIGFTVIQHVLATGYFSQGIFSDGERQSLAVLGS 414
                  +              +   L+     Q   +                   +  
Sbjct: 103 SFFCRVSVGKHHENEIRYQPFRMTPYLVKVQEQQGAESQLCCLLLAERVHSGYEAPRIPP 162

Query: 415 GDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGY 474
              ++      + +    D   +  L            L  +H +DR     I    +  
Sbjct: 163 EKRIFTTTHTPNCLFQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQA 222

Query: 475 RRG-RLQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCNA 533
                     R R  + ++  +        N     + +I   + +     + +      
Sbjct: 223 GGQPFDYSPIRFRTRNGEYITLDTSWSSFINPWSRKISFIIGRHKVRVGPLNEDVFAAPP 282

Query: 534 FQDNLTGIPNRQSFLDRLTTIL 555
             +  T  P+ Q   +++  +L
Sbjct: 283 CPEEKTPHPSVQELTEQIHRLL 304