RPSBLAST alignment of GI: 254780468 and protein with PDBid: 3mqq

>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A Length = 120
 Score = 40.0 bits (93), Expect = 0.002
 Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 1/80 (1%)

Query: 445 MHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEFRVRAADNQFHWMIIRIRPMSN 504
                R++      +D         S V    G    +  ++ A  +  W  +  R + +
Sbjct: 40  ADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRIMKRAGGELFWCHVTGRAL-D 98

Query: 505 SNGDILRYIGIANDITEQKK 524
               +   +    D++  ++
Sbjct: 99  RTAPLAAGVWTFEDLSATRR 118