HHsearch alignment for GI: 254780470 and conserved domain: COG0361
>COG0361 InfA Translation initiation factor 1 (IF-1) [Translation, ribosomal structure and biogenesis].
Probab=99.94 E-value=4.6e-27 Score=178.48 Aligned_cols=72 Identities=49% Similarity=0.828 Sum_probs=69.7
Q ss_pred CCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf 97564599978999815898179998166776533323354433344555544455555445556882899991251120
Q gi|254780470|r 1 MPKEETLEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRK 80 (110)
Q Consensus 1 M~Ked~ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk 80 (110)
T Consensus 1 m~~~d~~e~~g~V~e~L~~~~f~v~~--------------------------------------eng~~~~ahI~GKmr~ 42 (75)
T COG0361 1 MAKPDEIEMEGTVIEMLPNGRFRVEL--------------------------------------ENGHERLAHISGKMRK 42 (75)
T ss_pred CCCCCCCEEEEEEEEECCCCEEEEEE--------------------------------------CCCCEEEEECCCCCCE
T ss_conf 95564428999999973897899994--------------------------------------6996999882587440
Q ss_pred EEEEEECCCEEEEEECCCCCCCCEEEEEEC
Q ss_conf 164770299699997467578435988429
Q gi|254780470|r 81 HRIRISLGDKVKVAMNPYDMTRARITYRFK 110 (110)
Q Consensus 81 ~~IRIl~GDkV~Ve~SPYDLtkGRItyR~K 110 (110)
T Consensus 43 ~~i~I~~GD~V~Ve~~~~d~~kg~I~~Ry~ 72 (75)
T COG0361 43 NRIRILPGDVVLVELSPYDLTKGRIVYRYK 72 (75)
T ss_pred EEEEECCCCEEEEEECCCCCCCCCEEEEEC
T ss_conf 048857999999974566533355899833