HHsearch alignment for GI: 254780470 and conserved domain: COG0361

>COG0361 InfA Translation initiation factor 1 (IF-1) [Translation, ribosomal structure and biogenesis].
Probab=99.94  E-value=4.6e-27  Score=178.48  Aligned_cols=72  Identities=49%  Similarity=0.828  Sum_probs=69.7

Q ss_pred             CCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf             97564599978999815898179998166776533323354433344555544455555445556882899991251120
Q gi|254780470|r    1 MPKEETLEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRK   80 (110)
Q Consensus         1 M~Ked~ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk   80 (110)
T Consensus         1 m~~~d~~e~~g~V~e~L~~~~f~v~~--------------------------------------eng~~~~ahI~GKmr~   42 (75)
T COG0361           1 MAKPDEIEMEGTVIEMLPNGRFRVEL--------------------------------------ENGHERLAHISGKMRK   42 (75)
T ss_pred             CCCCCCCEEEEEEEEECCCCEEEEEE--------------------------------------CCCCEEEEECCCCCCE
T ss_conf             95564428999999973897899994--------------------------------------6996999882587440


Q ss_pred             EEEEEECCCEEEEEECCCCCCCCEEEEEEC
Q ss_conf             164770299699997467578435988429
Q gi|254780470|r   81 HRIRISLGDKVKVAMNPYDMTRARITYRFK  110 (110)
Q Consensus        81 ~~IRIl~GDkV~Ve~SPYDLtkGRItyR~K  110 (110)
T Consensus        43 ~~i~I~~GD~V~Ve~~~~d~~kg~I~~Ry~   72 (75)
T COG0361          43 NRIRILPGDVVLVELSPYDLTKGRIVYRYK   72 (75)
T ss_pred             EEEEECCCCEEEEEECCCCCCCCCEEEEEC
T ss_conf             048857999999974566533355899833