HHsearch alignment for GI: 254780470 and conserved domain: cd01854

>cd01854 YjeQ_engC YjeQ/EngC. YjeQ (YloQ in Bacillus subtilis) represents a protein family whose members are broadly conserved in bacteria and have been shown to be essential to the growth of E. coli and B. subtilis. Proteins of the YjeQ family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases. All YjeQ family proteins display a unique domain architecture, which includes an N-terminal OB-fold RNA-binding domain, the central permuted GTPase domain, and a zinc knuckle-like C-terminal cysteine domain. This domain architecture suggests a role for YjeQ as a regulator of translation.
Probab=93.85  E-value=0.21  Score=29.38  Aligned_cols=41  Identities=24%  Similarity=0.318  Sum_probs=33.3

Q ss_pred             CCEEEEEECCCEEEEEEEEECCCEEEEEECCCCCCCCEEEEEE
Q ss_conf             8289999125112016477029969999746757843598842
Q gi|254780470|r   67 NAVVIAYTAGRMRKHRIRISLGDKVKVAMNPYDMTRARITYRF  109 (110)
Q Consensus        67 ~~~VlA~isGKmRk~~IRIl~GDkV~Ve~SPYDLtkGRItyR~  109 (110)
T Consensus        17 ~~~~~~~~rg~~~~~~~~~~VGD~V~~~~~--~~~~g~I~~i~   57 (287)
T cd01854          17 GGELRCRARGKLRKKGIKPVVGDWVEVEPD--DDGEGVIVRVL   57 (287)
T ss_pred             CEEEEEEEEEECCCCCCCCCCCEEEEEEEC--CCCEEEEEEEE
T ss_conf             969999980010567999634659999974--79808999994