HHsearch alignment of GI: 254780470 and MMDB domain: 2oqk_A_

>2oqk_A (A:) Putative translation initiation factor EIF-1A; malaria, eukaryotic initiation factor (EIF), SGC, structural genomics; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.64  E-value=2.6e-16  Score=115.64  Aligned_cols=71  Identities=20%  Similarity=0.330  Sum_probs=66.6

Q ss_pred             CCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf             97564599978999815898179998166776533323354433344555544455555445556882899991251120
Q gi|254780470|r    1 MPKEETLEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRK   80 (110)
Q Consensus         1 M~Ked~ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk   80 (110)
                      |++++..++.|.|+++|+|+.|+|++                                      +||..++|+++||||+
T Consensus        26 ~~~~~~~e~~g~V~~~~G~~~~~V~~--------------------------------------~dg~~~l~~ipgK~Rk   67 (117)
T 2oqk_A           26 LVFKEEGQEYGQVQRXLGNGRLDAYC--------------------------------------FDGQKRLCHIRGKXRK   67 (117)
T ss_dssp             CCCCCTTEEEEEEEEEEETTEEEEEE--------------------------------------TTSCEEEEECCHHHHH
T ss_pred             ECCCCCCEEEEEEEEECCCCEEEEEE--------------------------------------CCCCEEEEEECCCCCC
T ss_conf             21699982899999973997899998--------------------------------------8999999997421201


Q ss_pred             EEEEEECCCEEEEEECCCCCCCCEEEEEEC
Q ss_conf             164770299699997467578435988429
Q gi|254780470|r   81 HRIRISLGDKVKVAMNPYDMTRARITYRFK  110 (110)
Q Consensus        81 ~~IRIl~GDkV~Ve~SPYDLtkGRItyR~K  110 (110)
                       +|+|..||.|.|+++|||.+||+|+|||.
T Consensus        68 -~iwI~~GD~VlVe~~~~d~~kg~Iv~r~~   96 (117)
T 2oqk_A           68 -KVWVNPGDIVLVSLRDFQDSKGDIILKYT   96 (117)
T ss_dssp             -HSCCCTTCEEEEEECTTCTTEEEEEEECC
T ss_pred             -EEEEECCCEEEEECCCCCCCEEEEEEECC
T ss_conf             -17980899999943257896899999889