HHsearch alignment of GI: 254780470 and MMDB domain: 2oqk_A_
>2oqk_A (A:) Putative translation initiation factor EIF-1A; malaria, eukaryotic initiation factor (EIF), SGC, structural genomics; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.64 E-value=2.6e-16 Score=115.64 Aligned_cols=71 Identities=20% Similarity=0.330 Sum_probs=66.6
Q ss_pred CCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf 97564599978999815898179998166776533323354433344555544455555445556882899991251120
Q gi|254780470|r 1 MPKEETLEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRK 80 (110)
Q Consensus 1 M~Ked~ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk 80 (110)
|++++..++.|.|+++|+|+.|+|++ +||..++|+++||||+
T Consensus 26 ~~~~~~~e~~g~V~~~~G~~~~~V~~--------------------------------------~dg~~~l~~ipgK~Rk 67 (117)
T 2oqk_A 26 LVFKEEGQEYGQVQRXLGNGRLDAYC--------------------------------------FDGQKRLCHIRGKXRK 67 (117)
T ss_dssp CCCCCTTEEEEEEEEEEETTEEEEEE--------------------------------------TTSCEEEEECCHHHHH
T ss_pred ECCCCCCEEEEEEEEECCCCEEEEEE--------------------------------------CCCCEEEEEECCCCCC
T ss_conf 21699982899999973997899998--------------------------------------8999999997421201
Q ss_pred EEEEEECCCEEEEEECCCCCCCCEEEEEEC
Q ss_conf 164770299699997467578435988429
Q gi|254780470|r 81 HRIRISLGDKVKVAMNPYDMTRARITYRFK 110 (110)
Q Consensus 81 ~~IRIl~GDkV~Ve~SPYDLtkGRItyR~K 110 (110)
+|+|..||.|.|+++|||.+||+|+|||.
T Consensus 68 -~iwI~~GD~VlVe~~~~d~~kg~Iv~r~~ 96 (117)
T 2oqk_A 68 -KVWVNPGDIVLVSLRDFQDSKGDIILKYT 96 (117)
T ss_dssp -HSCCCTTCEEEEEECTTCTTEEEEEEECC
T ss_pred -EEEEECCCEEEEECCCCCCCEEEEEEECC
T ss_conf -17980899999943257896899999889