HHsearch results for GI: 254780470 and protein with PDBid: 1hr0_W
>1hr0_W Translation initiation factor; ribosomal subunit, ribosome, IF1; 3.20A {Escherichia coli} SCOP: b.40.4.5 PDB: 1zo1_W
Probab=99.91 E-value=2.7e-26 Score=172.73 Aligned_cols=70 Identities=50% Similarity=0.822 Sum_probs=65.6
Q ss_pred CCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEE
Q ss_conf 75645999789998158981799981667765333233544333445555444555554455568828999912511201
Q gi|254780470|r 2 PKEETLEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRKH 81 (110)
Q Consensus 2 ~Ked~ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk~ 81 (110)
.|+|.|+++|+|+|+|||++|+|+|+ ||+.++||+|||||++
T Consensus 2 kk~d~i~~~G~V~e~lg~~~f~V~l~--------------------------------------ng~~~~a~i~GkmRk~ 43 (71)
T 1hr0_W 2 KEKDTIRTEGVVTEALPNATFRVKLD--------------------------------------SGPEILAYISGKMRMH 43 (71)
T ss_dssp CCSCCCCCEEECCCCCTTTBCCCEES--------------------------------------SSCBCCCEECHHHHHT
T ss_pred CCCCEEEEEEEEEEECCCCEEEEEEC--------------------------------------CCCEEEEECCHHHHEE
T ss_conf 75327999899999889989999988--------------------------------------9999999878675110
Q ss_pred EEEEECCCEEEEEECCCCCCCCEEEEEE
Q ss_conf 6477029969999746757843598842
Q gi|254780470|r 82 RIRISLGDKVKVAMNPYDMTRARITYRF 109 (110)
Q Consensus 82 ~IRIl~GDkV~Ve~SPYDLtkGRItyR~ 109 (110)
+|+|++||+|.|||||||++||||+||-
T Consensus 44 ri~I~~GD~V~Vel~~yd~~kgrIi~R~ 71 (71)
T 1hr0_W 44 YIRILPGDRVVVEITPYDPTRGRIVYRK 71 (71)
T ss_dssp CCCCCTTCEEEEECCTTCTTCCEECSCC
T ss_pred EEEECCCCEEEEEECCCCCCCEEEEECC
T ss_conf 5883699999999676679938689719