HHSEARCH alignment of GI: 254780470 and SCOP domain: d1hr0w_

Alignment
>d1hr0w_ b.40.4.5 (W:) Translational initiation factor 1, IF1 {Escherichia coli [TaxId: 562]}
Probab=99.91  E-value=8.3e-27  Score=174.32  Aligned_cols=70  Identities=50%  Similarity=0.822  Sum_probs=65.7

Q ss_pred             CCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEE
Q ss_conf             75645999789998158981799981667765333233544333445555444555554455568828999912511201
Q gi|254780470|r    2 PKEETLEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRKH   81 (110)
Q Consensus         2 ~Ked~ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk~   81 (110)
                      .|+|.|+++|+|+|+|||++|+|+|+                                      ||++++||+|||||++
T Consensus         2 kk~d~i~~~G~V~~~l~~~~f~V~l~--------------------------------------ng~~~~a~i~GkmRk~   43 (71)
T d1hr0w_           2 KEKDTIRTEGVVTEALPNATFRVKLD--------------------------------------SGPEILAYISGKMRMH   43 (71)
T ss_dssp             CCSCCCCCEEECCCCCTTTBCCCEES--------------------------------------SSCBCCCEECHHHHHT
T ss_pred             CCCCEEEEEEEEEEECCCCEEEEEEC--------------------------------------CCCEEEEEECCHHHEE
T ss_conf             75327999899999889989999987--------------------------------------9999999805443212


Q ss_pred             EEEEECCCEEEEEECCCCCCCCEEEEEE
Q ss_conf             6477029969999746757843598842
Q gi|254780470|r   82 RIRISLGDKVKVAMNPYDMTRARITYRF  109 (110)
Q Consensus        82 ~IRIl~GDkV~Ve~SPYDLtkGRItyR~  109 (110)
                      +|+|++||+|.||+||||++||||+||-
T Consensus        44 ri~i~~GD~V~Vel~pyd~~kgrIi~R~   71 (71)
T d1hr0w_          44 YIRILPGDRVVVEITPYDPTRGRIVYRK   71 (71)
T ss_dssp             CCCCCTTCEEEEECCTTCTTCCEECSCC
T ss_pred             EEEECCCCEEEEEECCCCCCCEEEEECC
T ss_conf             6973599999999776679948799729


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: Translational initiation factor 1, IF1
species: Escherichia coli [TaxId: 562]