HHSEARCH alignment of GI: 254780470 and SCOP domain: d1u0la1

Alignment
>d1u0la1 b.40.4.5 (A:3-68) Probable GTPase EngC (YjeQ), N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.82  E-value=0.0013  Score=39.54  Aligned_cols=61  Identities=20%  Similarity=0.281  Sum_probs=47.0

Q ss_pred             EEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEC
Q ss_conf             99789998158981799981667765333233544333445555444555554455568828999912511201647702
Q gi|254780470|r    8 EFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRKHRIRISL   87 (110)
Q Consensus         8 e~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk~~IRIl~   87 (110)
                      ..+|.|+.... ..|-|+.+                                     ++|..+.|++.|++|+-.+++++
T Consensus         2 ~~~G~Vi~~~~-~~y~V~~~-------------------------------------e~g~~~~c~~rG~lr~~~~~~~V   43 (66)
T d1u0la1           2 RRRGIVVSFHS-NMVTVEDE-------------------------------------ETGERILCKLRGKFRLQNLKIYV   43 (66)
T ss_dssp             CEEEEEEEEET-TEEEEEET-------------------------------------TTCCEEEEEECGGGTTTTCCCCT
T ss_pred             CEEEEEEEEEC-CEEEEEEC-------------------------------------CCCCEEEEEEECCCCCCCCCCCC
T ss_conf             70389999989-99999988-------------------------------------99959999962206026986132


Q ss_pred             CCEEEEEECCCCCCCCEEEEE
Q ss_conf             996999974675784359884
Q gi|254780470|r   88 GDKVKVAMNPYDMTRARITYR  108 (110)
Q Consensus        88 GDkV~Ve~SPYDLtkGRItyR  108 (110)
                      ||.|.++  |.|-..|.|+--
T Consensus        44 GD~V~~~--~~~~~~g~I~~I   62 (66)
T d1u0la1          44 GDRVEYT--PDETGSGVIENV   62 (66)
T ss_dssp             TCEEEEE--CCCSSSEEEEEE
T ss_pred             CCEEEEE--ECCCCEEEEEEE
T ss_conf             8899999--877990999898


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: Probable GTPase EngC (YjeQ), N-terminal domain
species: Thermotoga maritima [TaxId: 2336]