BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780471|ref|YP_003064884.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Liberibacter asiaticus str. psy62] (119 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|114707979|ref|ZP_01440871.1| Prokaryotic Cytochrome C oxidase subunit IV [Fulvimarina pelagi HTCC2506] gi|114536608|gb|EAU39740.1| Prokaryotic Cytochrome C oxidase subunit IV [Fulvimarina pelagi HTCC2506] Length = 223 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 51/112 (45%), Positives = 69/112 (61%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H ++ T L GF LS++LT +PF +VM D L +V A+AQI VH+ Sbjct: 19 SHGEGGEAHATLSGYLTGFGLSVVLTAVPFWLVMARPIEDGVTTALLVVSLAVAQIFVHM 78 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117 ++FLHM K E GW+IMA+IFT ++V I GS+WVM+HLN NMM M M+ Sbjct: 79 IYFLHMDAKSEGGWTIMALIFTAVLVIITISGSLWVMFHLNRNMMPMGDMQM 130 >gi|218532589|ref|YP_002423405.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium chloromethanicum CM4] gi|218524892|gb|ACK85477.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium chloromethanicum CM4] Length = 126 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 54/116 (46%), Positives = 75/116 (64%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 D+ H + H +G+ K + GF+LS+ILT IPF +VM DK I + I+ QI+V Sbjct: 9 DHGHGQDAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLGAVQIVV 68 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 H+++FLHM+TK E GW+ MA+IFTI +V I GS+WVM+HLN NMM + H Sbjct: 69 HMIYFLHMNTKSEGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMPISPEEIRH 124 >gi|163853731|ref|YP_001641774.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium extorquens PA1] gi|240141156|ref|YP_002965636.1| cytochrome o ubiquinol oxidase, subunit IV [Methylobacterium extorquens AM1] gi|254563668|ref|YP_003070763.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium extorquens DM4] gi|163665336|gb|ABY32703.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium extorquens PA1] gi|240011133|gb|ACS42359.1| cytochrome o ubiquinol oxidase, subunit IV [Methylobacterium extorquens AM1] gi|254270946|emb|CAX26951.1| cytochrome o ubiquinol oxidase, subunit IV [Methylobacterium extorquens DM4] Length = 126 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 54/116 (46%), Positives = 75/116 (64%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 D+ H + H +G+ K + GF+LS+ILT IPF +VM DK I + I+ QI+V Sbjct: 9 DHGHGQDAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLGAVQIVV 68 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 H+++FLHM+TK E GW+ MA+IFTI +V I GS+WVM+HLN NMM + H Sbjct: 69 HMIYFLHMNTKSEGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMPISPEEMRH 124 >gi|33593692|ref|NP_881336.1| cytochrome ubiquinol oxidase subunit IV [Bordetella pertussis Tohama I] gi|33595767|ref|NP_883410.1| cytochrome ubiquinol oxidase subunit IV [Bordetella parapertussis 12822] gi|33600293|ref|NP_887853.1| cytochrome ubiquinol oxidase subunit IV [Bordetella bronchiseptica RB50] gi|33563765|emb|CAE43005.1| cytochrome ubiquinol oxidase subunit IV [Bordetella pertussis Tohama I] gi|33565846|emb|CAE36392.1| cytochrome ubiquinol oxidase subunit IV [Bordetella parapertussis] gi|33567892|emb|CAE31805.1| cytochrome ubiquinol oxidase subunit IV [Bordetella bronchiseptica RB50] gi|332383096|gb|AEE67943.1| cytochrome ubiquinol oxidase subunit IV [Bordetella pertussis CS] Length = 135 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + H + +GT L GF+L+ ILT IPF +VM G F L I+ A+ QI+VH Sbjct: 19 HHHEDDDGPHGTLASYLTGFVLAAILTAIPFWLVMDGVFASSRTTALVILAFAVVQIVVH 78 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 LV+FLHM K E GW+++A+IFT+++V I GS+W+MYHLN+NMM M +R++ Sbjct: 79 LVYFLHMDAKSESGWNMLALIFTLVLVVITLSGSIWIMYHLNSNMMPMSVHDVRNM 134 >gi|329915608|ref|ZP_08276292.1| Cytochrome O ubiquinol oxidase subunit IV [Oxalobacteraceae bacterium IMCC9480] gi|327544869|gb|EGF30239.1| Cytochrome O ubiquinol oxidase subunit IV [Oxalobacteraceae bacterium IMCC9480] Length = 180 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 54/110 (49%), Positives = 76/110 (69%), Gaps = 1/110 (0%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 ++D H+ + +G+ K L GFIL++ILT IPF +V+ F + L ++ A QI Sbjct: 17 EHDESHHTHA-DHGSVKSYLTGFILAVILTAIPFWVVLGKVFEKSSTTALVVLGFAAVQI 75 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +VH+V+FLHM+TK E GWSI+A+IFT I+V I GS+WVMYHLN+NMM Sbjct: 76 VVHMVYFLHMNTKSEGGWSILALIFTTILVVIMLSGSIWVMYHLNHNMMP 125 >gi|116694973|ref|YP_729184.1| bo3-type chinol oxidase, subunit IV [Ralstonia eutropha H16] gi|113529472|emb|CAJ95819.1| bo3-type chinol oxidase, subunit IV [Ralstonia eutropha H16] Length = 141 Score = 127 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 73/112 (65%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H+ ++ + T L GF+LS+ LT IPF +VM F + + I+L QI+ Sbjct: 13 HSHGHDEDVGPHATLGGYLTGFVLSVFLTAIPFWLVMGKVFDKSSTTAIVILLIGAVQIV 72 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG 114 VH+++FLHM+ + E GW++++++FT+++V I GS+WVM+HLN+NMM Sbjct: 73 VHMIYFLHMNARSEGGWNMLSLMFTLVLVVITLTGSLWVMFHLNSNMMPTMQ 124 >gi|124266931|ref|YP_001020935.1| cytochrome ubiquinol oxidase subunit IV [Methylibium petroleiphilum PM1] gi|124259706|gb|ABM94700.1| cytochrome ubiquinol oxidase subunit IV [Methylibium petroleiphilum PM1] Length = 127 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 52/118 (44%), Positives = 79/118 (66%), Gaps = 2/118 (1%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H + +G+ K ++GF+LSL+LT IPF +VM + L I+ A QI+ Sbjct: 9 HHDGHEGDEAGHGSLKGYVIGFMLSLVLTAIPFWLVMGKVIASSGLTALVILGFAAVQIV 68 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS--MEGMRSI 118 VH+V+FLHM+ K E GW+I+A+IFT+++V I GS+WVMYHLN+NMM M +R++ Sbjct: 69 VHMVYFLHMNAKSEGGWTILALIFTLVLVVITLSGSLWVMYHLNHNMMPASMHEVRNM 126 >gi|331640947|ref|ZP_08342082.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H736] gi|331651365|ref|ZP_08352390.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli M718] gi|331671975|ref|ZP_08372771.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA280] gi|331676100|ref|ZP_08376812.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H591] gi|332281579|ref|ZP_08393992.1| cytochrome o ubiquinol oxidase C subunit [Shigella sp. D9] gi|1773113|gb|AAB40185.1| cytochrome o ubiquinol oxidase C subunit [Escherichia coli] gi|331037745|gb|EGI09965.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H736] gi|331051106|gb|EGI23158.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli M718] gi|331070964|gb|EGI42323.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA280] gi|331076158|gb|EGI47440.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H591] gi|332103931|gb|EGJ07277.1| cytochrome o ubiquinol oxidase C subunit [Shigella sp. D9] Length = 136 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q Sbjct: 28 MSHSTDH--SGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 84 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 ++VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 85 VLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 134 >gi|296444724|ref|ZP_06886687.1| cytochrome o ubiquinol oxidase subunit IV [Methylosinus trichosporium OB3b] gi|296257672|gb|EFH04736.1| cytochrome o ubiquinol oxidase subunit IV [Methylosinus trichosporium OB3b] Length = 378 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 4/113 (3%) Query: 9 MNMHSYG---TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 M+ +G +GF+L+++LT F +V F I+ + AIAQI VHL Sbjct: 17 MDAPGHGLREGLLTYSIGFVLAVLLTAASFYLVRTTFIWGPGIIMALV-ALAIAQIGVHL 75 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118 VFFLH++T ++ + +A+ F +++V + GS+W+M HL +N+M M + Sbjct: 76 VFFLHLTTAPDNTNNALALAFGVLIVTLVVGGSLWIMSHLAHNVMPDRMMARM 128 >gi|237730406|ref|ZP_04560887.1| cytochrome o ubiquinol oxidase subunit IV [Citrobacter sp. 30_2] gi|226905945|gb|EEH91863.1| cytochrome o ubiquinol oxidase subunit IV [Citrobacter sp. 30_2] Length = 136 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 77/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q Sbjct: 28 MSHSN--ESGGASHGSVKTYMTGFILSIILTVIPFWMVMTGSASP-AVILGTILAMAVVQ 84 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM++K ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 85 ILVHLVCFLHMNSKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 134 >gi|117622689|ref|YP_851602.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli APEC O1] gi|331645603|ref|ZP_08346707.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli M605] gi|115511813|gb|ABI99887.1| cytochrome O ubiquinol oxidase protein CyoD [Escherichia coli APEC O1] gi|331045765|gb|EGI17891.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli M605] Length = 136 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q Sbjct: 28 MSHSNA--SSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 84 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 85 ILVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 134 >gi|239817019|ref|YP_002945929.1| cytochrome o ubiquinol oxidase subunit IV [Variovorax paradoxus S110] gi|239803596|gb|ACS20663.1| cytochrome o ubiquinol oxidase subunit IV [Variovorax paradoxus S110] Length = 129 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 50/119 (42%), Positives = 77/119 (64%), Gaps = 2/119 (1%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 +D+ H+ S+ T K + GF+L+++LT IPF +VM + L I+ A QI Sbjct: 10 AHDDHHDDGPVSHSTFKGYMTGFVLAVVLTAIPFWLVMGNVLGKPSTTSLVILGFAAVQI 69 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 +VH+++FLHM K E GW+++A+IFTI++V I GS+WVMYH+N NMM M M+++ Sbjct: 70 VVHMIYFLHMDAKSESGWNMLALIFTIVLVVITLAGSLWVMYHMNANMMPMSVHDMKNM 128 >gi|170743800|ref|YP_001772455.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium sp. 4-46] gi|168198074|gb|ACA20021.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium sp. 4-46] Length = 140 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 73/111 (65%), Gaps = 1/111 (0%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 + + H ++G+ + + GF+LS+ILT IPF +VM D + + I+ A QI Sbjct: 22 AHGSAH-HPGGAHGSFRGYVTGFVLSVILTAIPFWLVMANTLDDTLVTSIVIMALAAVQI 80 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112 +VH+++FLHM+TK E GW+ MA++FT+ +V I GS+WVMYH++ NMM M Sbjct: 81 VVHMIYFLHMNTKSEGGWTFMALVFTLTLVVITLAGSIWVMYHMDQNMMPM 131 >gi|16126014|ref|NP_420578.1| ubiquinol oxidase subunit IV [Caulobacter crescentus CB15] gi|221234785|ref|YP_002517221.1| quinol cytochrome oxidase polypeptide IV [Caulobacter crescentus NA1000] gi|13423196|gb|AAK23746.1| ubiquinol oxidase subunit IV [Caulobacter crescentus CB15] gi|220963957|gb|ACL95313.1| quinol cytochrome oxidase polypeptide IV [Caulobacter crescentus NA1000] Length = 129 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 46/118 (38%), Positives = 79/118 (66%), Gaps = 2/118 (1%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 +D + + ++GT K ++GF+L++ILT IPF +VM + + ++ A+ Q++ Sbjct: 11 HDEHGDAHEAAHGTLKDYVIGFVLAVILTAIPFWLVMGDVLPSAQMTAVAVMGLAVIQVV 70 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS--MEGMRSI 118 VH+++FLHM+T+ E GW+++A+IFT+I+V I GS+WVM++LN +MM M MR Sbjct: 71 VHMIYFLHMNTRSEGGWTMLALIFTLILVVITLAGSLWVMHNLNTHMMPEMMPDMRQA 128 >gi|319786908|ref|YP_004146383.1| cytochrome o ubiquinol oxidase subunit IV [Pseudoxanthomonas suwonensis 11-1] gi|317465420|gb|ADV27152.1| cytochrome o ubiquinol oxidase subunit IV [Pseudoxanthomonas suwonensis 11-1] Length = 139 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 44/107 (41%), Positives = 73/107 (68%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 H + ++G+ + ++GF+LS+ILT IPF +VM D+ L I+ A+ QI+V Sbjct: 22 EHHAHDEGAHGSMRDYVIGFVLSVILTAIPFWLVMGNVIQDQGTTALVILGFAVVQIVVQ 81 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +V+FLHM+ + E GW+++A++FT+++V I GS+WVM+H+N NMM Sbjct: 82 MVYFLHMNARSEGGWNMLALMFTVVLVVIVLAGSLWVMHHMNANMMP 128 >gi|284006411|emb|CBA71647.1| cytochrome O ubiquinol oxidase protein [Arsenophonus nasoniae] Length = 132 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 76/110 (69%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M Y N + S+G+ K L+GFILS+ILT++PF +VM + + ++ AIAQ Sbjct: 23 MSYTNT-PHSGASHGSMKTYLIGFILSIILTVVPFWMVMNSTA-SHDTILWIVIGTAIAQ 80 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+T +D W+++A +FT++++ I +GS+W+MY+LN NMM Sbjct: 81 ILVHLVCFLHMNTSSDDRWNLVAFLFTMLIIGIVVIGSLWIMYNLNINMM 130 >gi|260221199|emb|CBA29525.1| Cytochrome o ubiquinol oxidase protein cyoD [Curvibacter putative symbiont of Hydra magnipapillata] Length = 148 Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 71/110 (64%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 D+ H+ + T + GF+LS+ILT IPF +VM D+ L + A+ QI+V Sbjct: 18 DDGHHAANEPHSTFSGYMTGFVLSIILTAIPFWLVMAKVITDRPTAVLVLGGFAVVQILV 77 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113 H+V+FLHM+ K+E GW++++ IFT++ VAI G++WVM+H+N NMM Sbjct: 78 HMVYFLHMNGKIEGGWTLLSTIFTVVFVAIAITGTLWVMFHMNANMMPTH 127 >gi|17988181|ref|NP_540815.1| cytochrome O ubiquinol oxidase operon protein CYOD [Brucella melitensis bv. 1 str. 16M] gi|17983942|gb|AAL53079.1| cytochrome o ubiquinol oxidase operon protein cyod [Brucella melitensis bv. 1 str. 16M] Length = 148 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 45/114 (39%), Positives = 77/114 (67%), Gaps = 2/114 (1%) Query: 4 DNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + H + H+ +G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+ Sbjct: 29 SSAHQTHDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQIL 87 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 VHL++FL++ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M Sbjct: 88 VHLIYFLYLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 141 >gi|319898316|ref|YP_004158409.1| Cytochrome o ubiquinol oxidase subunit IV [Bartonella clarridgeiae 73] gi|319402280|emb|CBI75819.1| Cytochrome o ubiquinol oxidase subunit IV [Bartonella clarridgeiae 73] Length = 209 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 2/97 (2%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQIIVHLVFFLHMST 73 + LVGFIL+++ T+ F VM G I I + A+ QIIV +VFFLH+++ Sbjct: 12 SIGSYLVGFILAVLFTLGSFIPVMYGLLDSWAISTKVIYLIGMALIQIIVQIVFFLHLNS 71 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + W+I+ ++FT + V + G+ W + HLN NMM Sbjct: 72 GPDAKWNIVTLLFTAMCVFVIIGGTWWAISHLNYNMM 108 >gi|300715583|ref|YP_003740386.1| cytochrome o ubiquinol oxidase protein CyoD (Ubiquinol oxidase chain D) [Erwinia billingiae Eb661] gi|299061419|emb|CAX58531.1| Cytochrome o ubiquinol oxidase protein CyoD (Ubiquinol oxidase chain D) [Erwinia billingiae Eb661] Length = 109 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 47/108 (43%), Positives = 78/108 (72%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + N + S+G+ K ++GFILS+ILT IPF +VM G K + +++CAI Q++V Sbjct: 2 SHSTNEHGASHGSVKSYMIGFILSIILTAIPFWMVMDGGA-SKATILGVVIVCAIVQVLV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLH++T E+ W+++A++F+ I++ I VGS+W+M++LN NMM+ Sbjct: 61 HLVYFLHLNTSSEERWNLVAIVFSAIIILIVVVGSLWIMWNLNYNMMA 108 >gi|300311776|ref|YP_003775868.1| ubiquinol oxidase subunit IV protein [Herbaspirillum seropedicae SmR1] gi|300074561|gb|ADJ63960.1| ubiquinol oxidase subunit IV protein [Herbaspirillum seropedicae SmR1] Length = 158 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 47/103 (45%), Positives = 68/103 (66%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K + GF+L++ILT IPF +VM M + ++ A QI+VH+ +FLHM+ K Sbjct: 33 TMKDYVTGFVLAVILTAIPFWLVMNKSISSSATMGIVLLALAAVQIVVHIKYFLHMNGKS 92 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118 E GW+++AMIFTI++V I GS+WVMYHLN+NMM ++ Sbjct: 93 EGGWNMLAMIFTIVIVVITLAGSLWVMYHLNHNMMPTMSPENM 135 >gi|187928955|ref|YP_001899442.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12J] gi|187725845|gb|ACD27010.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12J] Length = 142 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 45/98 (45%), Positives = 67/98 (68%) Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73 + T L GF+LS+ LT IPF +VM F + +TI+L QI+VH+++FLHM+ Sbjct: 27 HATLGGYLTGFVLSVFLTAIPFWLVMANVFDRSSTTAVTILLIGAVQIVVHMIYFLHMNA 86 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 K E GW++++++FT+++V I GS+WVMYHLN NMM Sbjct: 87 KSEGGWNMLSLMFTLVLVVITLSGSLWVMYHLNTNMMP 124 >gi|254780471|ref|YP_003064884.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Liberibacter asiaticus str. psy62] gi|254040148|gb|ACT56944.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Liberibacter asiaticus str. psy62] Length = 119 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ Sbjct: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH Sbjct: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 >gi|254420203|ref|ZP_05033927.1| cytochrome o ubiquinol oxidase subunit IV [Brevundimonas sp. BAL3] gi|196186380|gb|EDX81356.1| cytochrome o ubiquinol oxidase subunit IV [Brevundimonas sp. BAL3] Length = 131 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 51/119 (42%), Positives = 79/119 (66%), Gaps = 3/119 (2%) Query: 2 KYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 ++ H H++G+ + ++GF+LS+ILT IPF +VM G + L ++ A+ Q Sbjct: 12 SHEVDHLGHEAHNHGSFRSYMIGFVLSVILTAIPFALVMTGALPPQA-TALIVMAFAVVQ 70 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS-MEGMRSI 118 I+VH+++FLHM++K E GW+++A+IFTII+V I GS+WVMYHLN NMM M + Sbjct: 71 IVVHMIYFLHMNSKSEGGWTMLALIFTIIVVVIALSGSLWVMYHLNTNMMPATHEMSQM 129 >gi|153007396|ref|YP_001368611.1| cytochrome o ubiquinol oxidase subunit IV [Ochrobactrum anthropi ATCC 49188] gi|151559284|gb|ABS12782.1| Cytochrome o ubiquinol oxidase subunit IV [Ochrobactrum anthropi ATCC 49188] Length = 122 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 48/116 (41%), Positives = 77/116 (66%), Gaps = 1/116 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + S+G+ K L+GF+L+++LT++PF + M G+F ++ A+ Q Sbjct: 1 MSSAHETHDHGASHGSLKTYLIGFVLAVVLTVVPFMLAMNGYFTP-GTTAAIVLGIAVVQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 I+VHLV+FLH+ K E GW+I+A+IFT+I++AI GS+WVM+HL+ NMM M Sbjct: 60 ILVHLVYFLHLDPKSEGGWNILALIFTVIILAIVLAGSIWVMHHLDTNMMPMYMSP 115 >gi|226329082|ref|ZP_03804600.1| hypothetical protein PROPEN_02985 [Proteus penneri ATCC 35198] gi|225202268|gb|EEG84622.1| hypothetical protein PROPEN_02985 [Proteus penneri ATCC 35198] Length = 110 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 52/110 (47%), Positives = 79/110 (71%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N + + S+G+ K L+GFILS+ILT+IPF +VM+G I+ T+V A+ Q Sbjct: 1 MSHPNT-SPSGASHGSMKSYLIGFILSVILTVIPFWMVMEGTATPATIL-WTVVGMAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+T E+ W+++A +FT++++ I VGS+W+MY+LN NMM Sbjct: 59 IVVHLVCFLHMNTSSEERWNVVAFLFTLLIIGIVVVGSLWIMYNLNINMM 108 >gi|241667024|ref|YP_002985108.1| cytochrome o ubiquinol oxidase subunit IV [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862481|gb|ACS60146.1| cytochrome o ubiquinol oxidase subunit IV [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 133 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 55/118 (46%), Positives = 80/118 (67%), Gaps = 3/118 (2%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H +GT + + GF+LS+ILT IPF +VM G F + + ++ QI+ Sbjct: 16 HGHSHGHQA-GHGTFRSYMTGFVLSIILTAIPFWLVMSGVFESPAVTAVLVMGLGAIQIV 74 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 VH+VFFLHM+T+ E GW+IMA+IFT+I+VAI GS+WVM+HLN NMM M E M+++ Sbjct: 75 VHMVFFLHMNTRSEGGWTIMALIFTLIIVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132 >gi|158423725|ref|YP_001525017.1| cytochrome o ubiquinol oxidase subunit IV [Azorhizobium caulinodans ORS 571] gi|158330614|dbj|BAF88099.1| cytochrome o ubiquinol oxidase subunit IV [Azorhizobium caulinodans ORS 571] Length = 132 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 53/112 (47%), Positives = 76/112 (67%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + + H +G+ K + GFILS+ILT IPF +VM + + + I+ A+ QI+VH Sbjct: 18 HGAHGEDHGHGSFKSYMTGFILSVILTAIPFWLVMTNALGNNQLTAIVIMAFAVVQIVVH 77 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 +++FLHM+ KVE GWS++A+IFT+I+V I GS+WVMYHLN NMM MR Sbjct: 78 MIYFLHMTGKVEGGWSMLALIFTVIVVVIALSGSLWVMYHLNANMMPSHDMR 129 >gi|262375302|ref|ZP_06068535.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter lwoffii SH145] gi|262309556|gb|EEY90686.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter lwoffii SH145] Length = 123 Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 53/110 (48%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +D HN S+G KQ VGFILS+ILT+IPFG+VM G F + I+ I + A+AQ Sbjct: 16 MSHD--HNAAGESHGNVKQYTVGFILSVILTVIPFGMVMAGGF-GRGILITVIAITAVAQ 72 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+V L++FLHM++ E W+++A ++TI+ +AI VGS+W+M +L+ NMM Sbjct: 73 ILVQLIYFLHMNSSSEQRWNVIAFVYTILTIAILLVGSVWIMNYLHYNMM 122 >gi|110834895|ref|YP_693754.1| cytochrome o ubiquinol oxidase, protein CyoD [Alcanivorax borkumensis SK2] gi|110648006|emb|CAL17482.1| cytochrome o ubiquinol oxidase, protein CyoD [Alcanivorax borkumensis SK2] Length = 131 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 74/110 (67%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 +D+ HN + + K+ GF+L++ILT+IPF +VM G F + I+ A+ QI Sbjct: 5 THDHDHNDADIPHVSLKEYATGFVLAVILTVIPFWLVMGGVFESSATTVMVILGFALVQI 64 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +VH+VFFLHM+ E GW+++A++FT+I+V I GS+WVM++LN NMM Sbjct: 65 VVHMVFFLHMNFHSEGGWNMLALMFTLILVFITLAGSLWVMHNLNVNMMP 114 >gi|170748152|ref|YP_001754412.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium radiotolerans JCM 2831] gi|170654674|gb|ACB23729.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium radiotolerans JCM 2831] Length = 134 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 51/114 (44%), Positives = 75/114 (65%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + H + +GT + + GF+LS+ILT+IPF +VM + + L I+ Q++VH Sbjct: 17 DAHAHSEGGHGTFQSYMTGFVLSVILTVIPFWLVMGNVLDNSLVTTLVILALGGVQMVVH 76 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118 +++FLHMSTK E GW+ MA+IFTI +V I GS+WVMYHLN+NMM M+ + Sbjct: 77 VIYFLHMSTKSEGGWTFMALIFTITLVVIMLAGSVWVMYHLNHNMMPMDAHDVM 130 >gi|189010631|ref|ZP_03006400.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4076] gi|189403117|ref|ZP_03006965.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4486] gi|189404836|ref|ZP_03007598.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC869] gi|193068714|ref|ZP_03049675.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli E110019] gi|194428823|ref|ZP_03061358.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli B171] gi|194432628|ref|ZP_03064914.1| cytochrome o ubiquinol oxidase, subunit IV [Shigella dysenteriae 1012] gi|194438861|ref|ZP_03070946.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli 101-1] gi|208807081|ref|ZP_03249418.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4206] gi|208822824|ref|ZP_03263142.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4042] gi|217326573|ref|ZP_03442657.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. TW14588] gi|188999375|gb|EDU68361.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4076] gi|189362449|gb|EDU80868.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4486] gi|189373698|gb|EDU92114.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC869] gi|192958077|gb|EDV88519.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli E110019] gi|194413126|gb|EDX29413.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli B171] gi|194419189|gb|EDX35272.1| cytochrome o ubiquinol oxidase, subunit IV [Shigella dysenteriae 1012] gi|194422155|gb|EDX38157.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli 101-1] gi|208726882|gb|EDZ76483.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4206] gi|208737017|gb|EDZ84701.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4042] gi|217322794|gb|EEC31218.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. TW14588] Length = 124 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q Sbjct: 16 MSHSTDH--SGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 72 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 ++VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 73 VLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 122 >gi|91975078|ref|YP_567737.1| cytochrome C oxidase subunit IV [Rhodopseudomonas palustris BisB5] gi|91681534|gb|ABE37836.1| cytochrome C oxidase subunit IV [Rhodopseudomonas palustris BisB5] Length = 130 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 54/115 (46%), Positives = 77/115 (66%), Gaps = 2/115 (1%) Query: 3 YDNIHNMN--MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 +D+ H + H++GT K L+GF LS++LT IPF +VM +K L I+ A Q Sbjct: 13 HDHGHEAHVAAHNHGTLKSYLIGFGLSVVLTAIPFWLVMGDVLGNKQATGLVIMAFAAVQ 72 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115 I+VH+++FLHM+T E+GW++MA+IFTI+MV I GS+WVM+HL NMM M Sbjct: 73 IVVHMIYFLHMTTAAEEGWTMMALIFTIVMVVIALAGSLWVMHHLTTNMMPAHDM 127 >gi|239830890|ref|ZP_04679219.1| cytochrome o ubiquinol oxidase subunit IV [Ochrobactrum intermedium LMG 3301] gi|239823157|gb|EEQ94725.1| cytochrome o ubiquinol oxidase subunit IV [Ochrobactrum intermedium LMG 3301] Length = 122 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 75/116 (64%), Gaps = 1/116 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + ++G+ K L+GF+L+++LT++PF + M G+F ++ A+ Q Sbjct: 1 MMSSAHETHDHAAHGSLKSYLIGFVLAVVLTVVPFMLAMNGYFTP-ATTAAIVLGLAVVQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 I+VHLV+FLH+ K E GW+I+A+IFT+I++AI GS+WVM+HL+ NMM M Sbjct: 60 ILVHLVYFLHLDPKSEGGWNILALIFTVIILAIVLAGSIWVMHHLDTNMMPMYMSP 115 >gi|256060188|ref|ZP_05450368.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella neotomae 5K33] gi|261324165|ref|ZP_05963362.1| cytochrome o ubiquinol oxidase subunit IV [Brucella neotomae 5K33] gi|261300145|gb|EEY03642.1| cytochrome o ubiquinol oxidase subunit IV [Brucella neotomae 5K33] Length = 121 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 44/110 (40%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + ++G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+VHL++ Sbjct: 7 THDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQILVHLIY 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117 FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M + Sbjct: 66 FLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTPN 115 >gi|159184177|ref|NP_353175.2| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium tumefaciens str. C58] gi|159139510|gb|AAK85960.2| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium tumefaciens str. C58] Length = 130 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 47/101 (46%), Positives = 73/101 (72%) Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS 72 S+GT K ++GF+LS+ILT IPF +VM G +K ++ + I+ + QI VH+++FLHM Sbjct: 22 SHGTFKSYMIGFVLSVILTAIPFWLVMGGVLENKTLLVIAIMGLGVIQIFVHMIYFLHMD 81 Query: 73 TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113 T+ E GW+ MA+IFT++++ I GS+WVMY++N NMM + Sbjct: 82 TRSEGGWTFMALIFTVVVLLITLSGSLWVMYNMNKNMMPLH 122 >gi|315122073|ref|YP_004062562.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495475|gb|ADR52074.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 119 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 85/118 (72%), Positives = 101/118 (85%), Gaps = 2/118 (1%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGF-FLDKNIMCLTIVLCAIAQII 62 D HN HS+GT+++ L+GFILSLILT IPFG+VM+G FLDKN+ L IVLCAIAQII Sbjct: 2 DYNHNKRTHSHGTRRESLIGFILSLILTSIPFGMVMQGSSFLDKNMTYLVIVLCAIAQII 61 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG-MRSIH 119 VHLV+FLHM+ KVEDGW++MAM+FTII++AICFVGSMWVMYHLN NMM M+ MRSIH Sbjct: 62 VHLVYFLHMNVKVEDGWNVMAMVFTIIIIAICFVGSMWVMYHLNYNMMPMDESMRSIH 119 >gi|254690357|ref|ZP_05153611.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus bv. 6 str. 870] gi|260755901|ref|ZP_05868249.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 6 str. 870] gi|260676009|gb|EEX62830.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 6 str. 870] Length = 121 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 46/114 (40%), Positives = 77/114 (67%), Gaps = 2/114 (1%) Query: 4 DNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + H + H+ +G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+ Sbjct: 2 SSAHQTHDHAAHGSVKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQIL 60 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 VHL++FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M Sbjct: 61 VHLIYFLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 114 >gi|191173515|ref|ZP_03035042.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli F11] gi|190906224|gb|EDV65836.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli F11] Length = 124 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q Sbjct: 16 MSHSNA--SSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 72 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 73 ILVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 122 >gi|62289032|ref|YP_220825.1| ubiquinol oxidase subunit IV [Brucella abortus bv. 1 str. 9-941] gi|82698969|ref|YP_413543.1| cytochrome C oxidase subunit IV [Brucella melitensis biovar Abortus 2308] gi|148560321|ref|YP_001258092.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ovis ATCC 25840] gi|161618035|ref|YP_001591922.1| cytochrome o ubiquinol oxidase subunit IV [Brucella canis ATCC 23365] gi|163842321|ref|YP_001626725.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis ATCC 23445] gi|189023307|ref|YP_001934075.1| cytochrome C oxidase subunit IV [Brucella abortus S19] gi|254694846|ref|ZP_05156674.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus bv. 3 str. Tulya] gi|254696475|ref|ZP_05158303.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus bv. 2 str. 86/8/59] gi|254705226|ref|ZP_05167054.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella suis bv. 3 str. 686] gi|254707255|ref|ZP_05169083.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella pinnipedialis M163/99/10] gi|254709204|ref|ZP_05171015.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella pinnipedialis B2/94] gi|254713371|ref|ZP_05175182.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella ceti M644/93/1] gi|254716271|ref|ZP_05178082.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella ceti M13/05/1] gi|254718265|ref|ZP_05180076.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella sp. 83/13] gi|254731387|ref|ZP_05189965.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus bv. 4 str. 292] gi|256030728|ref|ZP_05444342.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella pinnipedialis M292/94/1] gi|256158735|ref|ZP_05456610.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella ceti M490/95/1] gi|256254132|ref|ZP_05459668.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella ceti B1/94] gi|256258611|ref|ZP_05464147.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus bv. 9 str. C68] gi|256368511|ref|YP_003106017.1| cytochrome o ubiquinol oxidase subunit IV [Brucella microti CCM 4915] gi|260169631|ref|ZP_05756442.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. F5/99] gi|260546326|ref|ZP_05822066.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus NCTC 8038] gi|260567307|ref|ZP_05837777.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella suis bv. 4 str. 40] gi|260759125|ref|ZP_05871473.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 4 str. 292] gi|260760850|ref|ZP_05873193.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 2 str. 86/8/59] gi|260884925|ref|ZP_05896539.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 9 str. C68] gi|261215176|ref|ZP_05929457.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 3 str. Tulya] gi|261218048|ref|ZP_05932329.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M13/05/1] gi|261221275|ref|ZP_05935556.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti B1/94] gi|261314737|ref|ZP_05953934.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis M163/99/10] gi|261316705|ref|ZP_05955902.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis B2/94] gi|261321102|ref|ZP_05960299.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M644/93/1] gi|261755935|ref|ZP_05999644.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis bv. 3 str. 686] gi|261759161|ref|ZP_06002870.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella sp. F5/99] gi|265983226|ref|ZP_06095961.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. 83/13] gi|265987775|ref|ZP_06100332.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis M292/94/1] gi|265997236|ref|ZP_06109793.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M490/95/1] gi|297247450|ref|ZP_06931168.1| cytochrome o ubiquinol oxidase operon protein cyoD [Brucella abortus bv. 5 str. B3196] gi|306840008|ref|ZP_07472802.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. NF 2653] gi|306842662|ref|ZP_07475307.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. BO2] gi|306843645|ref|ZP_07476246.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. BO1] gi|62195164|gb|AAX73464.1| QoxD, ubiquinol oxidase subunit IV [Brucella abortus bv. 1 str. 9-941] gi|82615070|emb|CAJ09998.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella melitensis biovar Abortus 2308] gi|148371578|gb|ABQ61557.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ovis ATCC 25840] gi|161334846|gb|ABX61151.1| cytochrome o ubiquinol oxidase subunit IV [Brucella canis ATCC 23365] gi|163673044|gb|ABY37155.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis ATCC 23445] gi|189018879|gb|ACD71601.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus S19] gi|255998669|gb|ACU47068.1| cytochrome o ubiquinol oxidase subunit IV [Brucella microti CCM 4915] gi|260096433|gb|EEW80309.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus NCTC 8038] gi|260156825|gb|EEW91905.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella suis bv. 4 str. 40] gi|260669443|gb|EEX56383.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 4 str. 292] gi|260671282|gb|EEX58103.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 2 str. 86/8/59] gi|260874453|gb|EEX81522.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 9 str. C68] gi|260916783|gb|EEX83644.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 3 str. Tulya] gi|260919859|gb|EEX86512.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti B1/94] gi|260923137|gb|EEX89705.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M13/05/1] gi|261293792|gb|EEX97288.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M644/93/1] gi|261295928|gb|EEX99424.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis B2/94] gi|261303763|gb|EEY07260.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis M163/99/10] gi|261739145|gb|EEY27141.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella sp. F5/99] gi|261745688|gb|EEY33614.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis bv. 3 str. 686] gi|262551704|gb|EEZ07694.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M490/95/1] gi|264659972|gb|EEZ30233.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis M292/94/1] gi|264661818|gb|EEZ32079.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. 83/13] gi|297174619|gb|EFH33966.1| cytochrome o ubiquinol oxidase operon protein cyoD [Brucella abortus bv. 5 str. B3196] gi|306276336|gb|EFM58036.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. BO1] gi|306287197|gb|EFM58694.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. BO2] gi|306404972|gb|EFM61257.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. NF 2653] Length = 121 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 46/114 (40%), Positives = 77/114 (67%), Gaps = 2/114 (1%) Query: 4 DNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + H + H+ +G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+ Sbjct: 2 SSAHQTHDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQIL 60 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 VHL++FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M Sbjct: 61 VHLIYFLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 114 >gi|190895344|ref|YP_001985636.1| cytochrome O ubiquinol oxidase protein, subunit IV [Rhizobium etli CIAT 652] gi|218514327|ref|ZP_03511167.1| cytochrome O ubiquinol oxidase protein, subunit IV [Rhizobium etli 8C-3] gi|190699289|gb|ACE93373.1| cytochrome O ubiquinol oxidase protein, subunit IV [Rhizobium etli CIAT 652] gi|327188656|gb|EGE55862.1| cytochrome O ubiquinol oxidase protein, subunit IV [Rhizobium etli CNPAF512] Length = 133 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 53/118 (44%), Positives = 78/118 (66%), Gaps = 3/118 (2%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H +GT + + GF LS++LT IPF +VM G F + + ++ QI+ Sbjct: 16 HGHSHGHQA-GHGTFRSYMTGFALSIVLTAIPFWLVMSGVFESPAVTAVLVMAIGAIQIV 74 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 VH+VFFLHM+ + E GW++MA+IFTII+VAI GS+WVM+HLN NMM M E M+++ Sbjct: 75 VHMVFFLHMNPRSEGGWTMMALIFTIIIVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132 >gi|304395491|ref|ZP_07377374.1| cytochrome o ubiquinol oxidase subunit IV [Pantoea sp. aB] gi|308185899|ref|YP_003930030.1| Cytochrome o ubiquinol oxidase protein cyoD [Pantoea vagans C9-1] gi|304356785|gb|EFM21149.1| cytochrome o ubiquinol oxidase subunit IV [Pantoea sp. aB] gi|308056409|gb|ADO08581.1| Cytochrome o ubiquinol oxidase protein cyoD [Pantoea vagans C9-1] Length = 109 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + N + S+G+ K ++GFILS+ILT IPF +VM G + +++CA+ Q++V Sbjct: 2 SHSVNEHGASHGSVKSYMIGFILSIILTAIPFWMVMDGSA-SHGTILGVVLVCAVIQVLV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLH+ +K E GW+++A++F+ I++ I VGS+W+M++LN NMM Sbjct: 61 HLVYFLHLDSKSEGGWNMVAIVFSAIIILIVVVGSLWIMWNLNYNMMP 108 >gi|197284017|ref|YP_002149889.1| cytochrome O ubiquinol oxidase protein [Proteus mirabilis HI4320] gi|227358113|ref|ZP_03842454.1| cytochrome O ubiquinol oxidase protein [Proteus mirabilis ATCC 29906] gi|194681504|emb|CAR40376.1| cytochrome O ubiquinol oxidase protein [Proteus mirabilis HI4320] gi|227161449|gb|EEI46486.1| cytochrome O ubiquinol oxidase protein [Proteus mirabilis ATCC 29906] Length = 110 Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 79/110 (71%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N + + S+G+ K L+GFILS+ILT+IPF +VM+G I+ T+V A+ Q Sbjct: 1 MSHPNT-SPSGASHGSMKSYLIGFILSVILTVIPFWMVMEGTATTSTIL-WTVVGMAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+T E+ W+++A +FT++++ I +GS+W+MY+LN NMM Sbjct: 59 IVVHLVCFLHMNTSSEERWNVIAFLFTLLIIGIVVIGSLWIMYNLNINMM 108 >gi|225626592|ref|ZP_03784631.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti str. Cudo] gi|237814519|ref|ZP_04593517.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus str. 2308 A] gi|225618249|gb|EEH15292.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti str. Cudo] gi|237789356|gb|EEP63566.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus str. 2308 A] Length = 122 Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 45/116 (38%), Positives = 75/116 (64%), Gaps = 1/116 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + ++G+ K L+GF+L++ILT++PF + M G+F + ++ A Q Sbjct: 1 MMSSAHQTHDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 I+VHL++FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M Sbjct: 60 ILVHLIYFLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 115 >gi|262372200|ref|ZP_06065479.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter junii SH205] gi|262312225|gb|EEY93310.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter junii SH205] Length = 124 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 52/106 (49%), Positives = 76/106 (71%), Gaps = 1/106 (0%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + HN S+G KQ VGFILS++LTIIPFG+VM G F + I+ I + A+AQ++V Sbjct: 19 HDHNAAGASHGNFKQYTVGFILSVVLTIIPFGMVMAGGF-SRGILMTVIAITAVAQVLVQ 77 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 LV+FLHM+T E W+++A I+TI+ +A+ VGS+W+M +L+ NMM Sbjct: 78 LVYFLHMNTSSEQRWNLIAFIYTILCIAVLLVGSVWIMNYLHYNMM 123 >gi|253990904|ref|YP_003042260.1| cytochrome o ubiquinol oxidase subunit IV [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782354|emb|CAQ85518.1| cyoD; Cytochrome O ubiquinol oxidase protein cyoD (Ubiquinol oxidase chain D) [Photorhabdus asymbiotica] Length = 110 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 76/110 (69%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N S+G+ K ++GF+LS+ILT+IPF +VM G + T+V A+ Q Sbjct: 1 MSHSNT-AHTGASHGSLKSYVIGFVLSVILTVIPFWMVMDGSA-SHTTILTTVVALAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VH ++FLHM+T E+ W+++A++FTI+++ I VGS+W+MY+LN NMM Sbjct: 59 ILVHFIYFLHMNTSSEERWNLVALLFTILIIGIVVVGSLWIMYNLNINMM 108 >gi|116255239|ref|YP_771072.1| putative cytochrome o ubiquinol oxidase protein CyoD [Rhizobium leguminosarum bv. viciae 3841] gi|115259887|emb|CAK02981.1| putative cytochrome o ubiquinol oxidase protein CyoD [Rhizobium leguminosarum bv. viciae 3841] Length = 133 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 55/118 (46%), Positives = 80/118 (67%), Gaps = 3/118 (2%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H +GT + + GF+LS+ILT IPF +VM G F + + ++ QI+ Sbjct: 16 HGHSHGHQA-GHGTFRSYMTGFVLSVILTAIPFWLVMSGVFASPVLTAVLVMGLGAIQIV 74 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 VH+VFFLHM+T+ E GW+IMA+IFT+I+VAI GS+WVM+HLN NMM M E M+++ Sbjct: 75 VHMVFFLHMNTRSEGGWTIMALIFTLIIVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132 >gi|262369760|ref|ZP_06063088.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter johnsonii SH046] gi|262315828|gb|EEY96867.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter johnsonii SH046] Length = 123 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +D HN S+G KQ +GFILS+ILT+IPFG+VM G F + I+ I + A+AQ Sbjct: 16 MSHD--HNSAGASHGNTKQYTIGFILSVILTVIPFGMVMAGGF-GRGIVMAVIAITAVAQ 72 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 ++V LV+FLHM++ E W+++A I+T++ +A+ VGS+W+M +L+ NMM Sbjct: 73 VLVQLVYFLHMNSSSEQRWNVIAFIYTVLCIAVLLVGSVWIMNYLHYNMM 122 >gi|290510102|ref|ZP_06549472.1| cytochrome o ubiquinol oxidase operon protein cyoD [Klebsiella sp. 1_1_55] gi|289776818|gb|EFD84816.1| cytochrome o ubiquinol oxidase operon protein cyoD [Klebsiella sp. 1_1_55] Length = 136 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 79/110 (71%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H + +G+ K + GFILS+ILT+IPF +VM G ++ TI++ A+ Q Sbjct: 28 MSHSTDH--SGAPHGSVKSYMTGFILSIILTVIPFAMVMSGSA-SHAVILGTILVTAVVQ 84 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLHM++K ++GW++ A IFT+I++AI VGS+W+M++LN NMM Sbjct: 85 IVVHLVYFLHMNSKSDEGWNLTAFIFTVIIIAIVVVGSIWIMWNLNYNMM 134 >gi|225851588|ref|YP_002731821.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis ATCC 23457] gi|256045835|ref|ZP_05448711.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv. 1 str. Rev.1] gi|256112552|ref|ZP_05453473.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv. 3 str. Ether] gi|256264901|ref|ZP_05467433.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella melitensis bv. 2 str. 63/9] gi|260563126|ref|ZP_05833612.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella melitensis bv. 1 str. 16M] gi|265992249|ref|ZP_06104806.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv. 1 str. Rev.1] gi|265993992|ref|ZP_06106549.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv. 3 str. Ether] gi|225639953|gb|ACN99866.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis ATCC 23457] gi|260153142|gb|EEW88234.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella melitensis bv. 1 str. 16M] gi|262764973|gb|EEZ10894.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv. 3 str. Ether] gi|263003315|gb|EEZ15608.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv. 1 str. Rev.1] gi|263095386|gb|EEZ18987.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella melitensis bv. 2 str. 63/9] gi|326408057|gb|ADZ65122.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis M28] gi|326537773|gb|ADZ85988.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis M5-90] Length = 121 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 45/114 (39%), Positives = 77/114 (67%), Gaps = 2/114 (1%) Query: 4 DNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + H + H+ +G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+ Sbjct: 2 SSAHQTHDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQIL 60 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 VHL++FL++ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M Sbjct: 61 VHLIYFLYLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 114 >gi|37527738|ref|NP_931083.1| cytochrome o ubiquinol oxidase subunit IV [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787174|emb|CAE16250.1| cytochrome O ubiquinol oxidase protein cyoD (ubiquinol oxidase chain D) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 110 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 76/110 (69%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + S+G+ K L+GF+LS+ILT+IPF +VM G + T+V A+ Q Sbjct: 1 MSHSDT-AHTGASHGSLKSYLIGFVLSVILTVIPFWMVMDGSA-SHTTILTTVVALAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 IIVH ++FLHM+T E+ W+++A++FTI+++ I VGS+W+MY+LN NMM Sbjct: 59 IIVHFIYFLHMNTSSEERWNLVALLFTILIIGIVVVGSLWIMYNLNINMM 108 >gi|195970075|ref|YP_002122335.1| cytochrome o ubiquinol oxidase protein CyoD [Sinorhizobium meliloti 1021] gi|307320582|ref|ZP_07599996.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium meliloti AK83] gi|186929524|emb|CAQ51297.1| Cytochrome o ubiquinol oxidase protein cyoD [Sinorhizobium meliloti 1021] gi|306893732|gb|EFN24504.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium meliloti AK83] Length = 133 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 3/118 (2%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H + +GT K GF+LS+ILT IPF +VM + I+ QI+ Sbjct: 16 HGHSHGHDA-GHGTLKSYATGFVLSVILTAIPFWLVMADILDSAVLTAAIIMALGAVQIV 74 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 VH++FFLHM+T+ E GW++MA+IFTI++VAI GS+WVM+HLN NMM M E M+++ Sbjct: 75 VHMIFFLHMNTRSEGGWTMMALIFTILLVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132 >gi|146310557|ref|YP_001175631.1| cytochrome o ubiquinol oxidase subunit IV [Enterobacter sp. 638] gi|145317433|gb|ABP59580.1| cytochrome bo3 quinol oxidase subunit 4 [Enterobacter sp. 638] Length = 108 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 54/110 (49%), Positives = 79/110 (71%), Gaps = 4/110 (3%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N H S+G+ K + GFILS+ILT+IPF +VM G K ++ +++ A+ Q Sbjct: 1 MSHSNDHG---ASHGSVKTYMTGFILSIILTVIPFWMVMNGSA-SKPVLLGVVLVTAVIQ 56 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+TK ++GW+I A IFT+I++AI VGS+W+M++LN NMM Sbjct: 57 ILVHLVCFLHMNTKSDEGWNITAFIFTVIIIAILVVGSIWIMWNLNYNMM 106 >gi|262279560|ref|ZP_06057345.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter calcoaceticus RUH2202] gi|262259911|gb|EEY78644.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter calcoaceticus RUH2202] Length = 124 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 52/107 (48%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + HN S+G KQ VGFILS+ILTIIPFG+VM G F + I+ I + A+AQ++V Sbjct: 18 SHDHNAAGASHGNFKQYTVGFILSVILTIIPFGMVMAGGF-SRGILVTVIAITAVAQVLV 76 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 LV+FLHM+T E W+++A I+TI+ +A+ +GS+W+M +L+ NMM Sbjct: 77 QLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLIGSVWIMNYLHYNMM 123 >gi|227820112|ref|YP_002824083.1| cytochrome O ubiquinol oxidase subunit IV [Sinorhizobium fredii NGR234] gi|227339111|gb|ACP23330.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium fredii NGR234] Length = 133 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 51/118 (43%), Positives = 76/118 (64%), Gaps = 3/118 (2%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H +GT K L GF+LS+ILT IPF +VM + + I+ QI+ Sbjct: 16 HGHSHGHEA-GHGTLKSYLTGFVLSVILTAIPFWLVMAEVLDSPVLTAVIIMALGAIQIV 74 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 VH++FFLHM+T+ E GW++MA+IFTI++V I GS+WVM+HL NMM M + M+++ Sbjct: 75 VHMIFFLHMNTRSEGGWTMMALIFTIVLVVIALSGSLWVMHHLEENMMPMSPQMMKNM 132 >gi|169633240|ref|YP_001706976.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii SDF] gi|169795506|ref|YP_001713299.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii AYE] gi|260549406|ref|ZP_05823625.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. RUH2624] gi|260554568|ref|ZP_05826789.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii ATCC 19606] gi|169148433|emb|CAM86299.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii AYE] gi|169152032|emb|CAP00912.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii] gi|260407515|gb|EEX00989.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. RUH2624] gi|260411110|gb|EEX04407.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii ATCC 19606] Length = 124 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 51/107 (47%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + HN S+G KQ VGFILS+ILTIIPFG+VM G F + ++ I + A+AQ++V Sbjct: 18 SHEHNAAGASHGNFKQYTVGFILSVILTIIPFGMVMAGGF-SRGLLVTVIAITAVAQVLV 76 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 LV+FLHM+T E W+++A I+TI+ +A+ +GS+W+M +L+ NMM Sbjct: 77 QLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLIGSVWIMNYLHYNMM 123 >gi|315500561|ref|YP_004089363.1| cytochrome o ubiquinol oxidase subunit IV [Asticcacaulis excentricus CB 48] gi|315418573|gb|ADU15212.1| cytochrome o ubiquinol oxidase subunit IV [Asticcacaulis excentricus CB 48] Length = 147 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 2/112 (1%) Query: 1 MKYDNIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 +++ H + + + K L+GF LS+ILT IPF + M L + I++ + Sbjct: 28 LQHGQGHGRDHGAGHASVKDYLIGFSLSVILTAIPFALTMLK-LLPAATLVPVILILGVI 86 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 QI+VHL +FLHM++ W+ +A IFT I+V I VGS+WVM HLN+NM Sbjct: 87 QIVVHLRYFLHMNSSSSQVWNNLAFIFTAIIVGILIVGSLWVMTHLNHNMAP 138 >gi|261346373|ref|ZP_05974017.1| cytochrome o ubiquinol oxidase, subunit IV [Providencia rustigianii DSM 4541] gi|282565690|gb|EFB71225.1| cytochrome o ubiquinol oxidase, subunit IV [Providencia rustigianii DSM 4541] Length = 110 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 77/110 (70%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M ++ S+G+ K L+GFILS+ILT+IPF +VM G + ++ T+V A+ Q Sbjct: 1 MSHERD-AHTGASHGSVKTYLIGFILSVILTVIPFWMVMNGTA-SQGVILATVVGMAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+T ++ W+++A +FT+++V I +GS+W+MY+LN NMM Sbjct: 59 ILVHLVCFLHMNTSSDERWNLVAFLFTMLIVGIVVIGSLWIMYNLNINMM 108 >gi|326317721|ref|YP_004235393.1| cytochrome o ubiquinol oxidase subunit IV [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374557|gb|ADX46826.1| cytochrome o ubiquinol oxidase subunit IV [Acidovorax avenae subsp. avenae ATCC 19860] Length = 144 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 47/104 (45%), Positives = 70/104 (67%) Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73 + T +VGF+LS+ILT IPF +VM D++ L + A+ QI+VH+V FLHM+ Sbjct: 28 HSTFSGYMVGFVLSIILTAIPFWLVMAKVISDRSTAVLVLGAFAVVQILVHMVCFLHMNG 87 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117 KVE GW++++ IFT++ VAI G++WVM+H+N NMM M + Sbjct: 88 KVEGGWTMLSTIFTVVFVAIAIAGTLWVMFHMNTNMMPEHNMPA 131 >gi|86747365|ref|YP_483861.1| cytochrome C oxidase subunit IV [Rhodopseudomonas palustris HaA2] gi|86570393|gb|ABD04950.1| cytochrome C oxidase subunit IV [Rhodopseudomonas palustris HaA2] Length = 130 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 4/118 (3%) Query: 2 KYDNIHNMNMH----SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCA 57 + + H H ++GT K L+GF LS++LT IPF +VM +K L I+ A Sbjct: 10 AHGHDHGHEAHVAAQTHGTLKSYLIGFGLSVVLTAIPFWLVMGDVLGNKQATGLVIMAFA 69 Query: 58 IAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115 QI+VH+++FLHM+T E+GW++MA+IFTI+MV I GS+WVM+HL NMM M Sbjct: 70 AVQIVVHMIYFLHMTTAAEEGWTMMALIFTIVMVVIALAGSLWVMHHLTTNMMPAHDM 127 >gi|114767474|ref|ZP_01446257.1| cytochrome o ubiquinol oxidase subunit IV [Pelagibaca bermudensis HTCC2601] gi|114540454|gb|EAU43536.1| cytochrome o ubiquinol oxidase subunit IV [Roseovarius sp. HTCC2601] Length = 127 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 45/108 (41%), Positives = 68/108 (62%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + H +GT Q ++GF L+ ILTIIPF +VM + ++ + I+ QI+VHLV+ Sbjct: 5 THHAHDHGTMGQLMIGFALAAILTIIPFYLVMAEVDMARSTLVGIIMGLGAVQIVVHLVY 64 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115 FLH+ E+GW+ A IF +I++ I GS+WVM+++N NMM M M Sbjct: 65 FLHLKRSSEEGWNFFATIFAVIILVIVLAGSLWVMHNMNENMMPMHEM 112 >gi|194292955|ref|YP_002008862.1| transmembrane cytochrome o ubiquinol oxidase subunit iv [Cupriavidus taiwanensis LMG 19424] gi|193226859|emb|CAQ72810.1| TRANSMEMBRANE CYTOCHROME O UBIQUINOL OXIDASE (SUBUNIT IV) OXIDOREDUCTASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 135 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 41/109 (37%), Positives = 72/109 (66%), Gaps = 1/109 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 +D+ H + + + + GF+LS+ILT IPF +VM F + + ++ QI+ Sbjct: 19 HDHGHGES-EIHISLGGYVTGFVLSVILTAIPFWLVMGRVFEQSSTTAMVLLALGAVQIV 77 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 VH+++FLH++ + E GW+++A+IFT+++V I G++WVM+HLN+NMM Sbjct: 78 VHMIYFLHLNARSEGGWNMLALIFTLVLVVITLTGTLWVMFHLNSNMMP 126 >gi|237808828|ref|YP_002893268.1| cytochrome o ubiquinol oxidase subunit IV [Tolumonas auensis DSM 9187] gi|237501089|gb|ACQ93682.1| cytochrome o ubiquinol oxidase subunit IV [Tolumonas auensis DSM 9187] Length = 109 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 77/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M ++ H S+G+ K + GFILS++LT+IPF IVM+ ++ I A+AQ Sbjct: 1 MSHNTSHG--GASHGSVKSYITGFILSVVLTVIPFWIVMESALPPSTVIL-VIAAFAVAQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+V L++FLHM TK E GW+++A +FT++++AI VGS+W+M+HLN+NMM Sbjct: 58 ILVQLIYFLHMDTKSEGGWNMIAFVFTVLIIAIIVVGSLWIMFHLNHNMM 107 >gi|23500960|ref|NP_697087.1| ubiquinol oxidase subunit IV [Brucella suis 1330] gi|23346817|gb|AAN29002.1| ubiquinol oxidase subunit IV [Brucella suis 1330] Length = 121 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 44/109 (40%), Positives = 74/109 (67%), Gaps = 1/109 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + ++G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+VHL++ Sbjct: 7 THDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQILVHLIY 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M Sbjct: 66 FLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 114 >gi|307309510|ref|ZP_07589166.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium meliloti BL225C] gi|306900095|gb|EFN30715.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium meliloti BL225C] Length = 133 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 53/118 (44%), Positives = 78/118 (66%), Gaps = 3/118 (2%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H + +GT K + GF+LS+ILT IPF +VM + I+ QI+ Sbjct: 16 HGHSHGHDA-GHGTLKSYMTGFVLSVILTAIPFWLVMADVLDSAVLTAAIIMALGALQIV 74 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 VH++FFLHM+T+ E GW++MA+IFTI++VAI GS+WVM+HLN NMM M E M+++ Sbjct: 75 VHMIFFLHMNTRSEGGWTMMALIFTILLVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132 >gi|307129919|ref|YP_003881935.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii 3937] gi|306527448|gb|ADM97378.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii 3937] Length = 110 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 82/110 (74%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H+ S+G+ K L+GF+LS+ILT+IPFG+VM G +++ LT++ CA+ Q Sbjct: 1 MSHS-THDHAGASHGSVKSYLIGFVLSIILTVIPFGLVMNGSA-SHSVILLTVLGCAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLH++T E+ W+++A++FT +++AI VGS+W+M + ++NMM Sbjct: 59 ILVHLVYFLHLNTSSEERWNVVAIVFTALIIAIVVVGSLWIMMNAHHNMM 108 >gi|188584037|ref|YP_001927482.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium populi BJ001] gi|179347535|gb|ACB82947.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium populi BJ001] Length = 131 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 49/104 (47%), Positives = 70/104 (67%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K + GF+LS+ILT IPF +VM DK + + I+ A+ QI+VH+++FLHM+TK Sbjct: 26 SFKDYVTGFVLSVILTAIPFWLVMDNVIEDKIVTGVVILALAVVQIVVHMIYFLHMNTKS 85 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 E GW+ +A+IFTI +V I GS+WVM+HLN NMM + H Sbjct: 86 EGGWTFLALIFTITLVVITLCGSIWVMHHLNTNMMPISAEEMRH 129 >gi|209546368|ref|YP_002278258.1| cytochrome o ubiquinol oxidase subunit IV [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539225|gb|ACI59158.1| cytochrome o ubiquinol oxidase subunit IV [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 133 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 54/118 (45%), Positives = 79/118 (66%), Gaps = 3/118 (2%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H +GT + + GF LS++LT IPF +VM G F + L ++ QI+ Sbjct: 16 HGHSHGHQA-GHGTFRSYMTGFALSVVLTAIPFWLVMAGVFASPLVTALLVMGIGAIQIV 74 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 VH+VFFLHM+ + E GW++MA+IFTII+VAI GS+WVM+HLN+NMM M E M+++ Sbjct: 75 VHMVFFLHMNPRSEGGWTMMALIFTIIIVAIALSGSLWVMHHLNSNMMPMSPEMMKNM 132 >gi|290474675|ref|YP_003467555.1| cytochrome o ubiquinol oxidase subunit IV [Xenorhabdus bovienii SS-2004] gi|289173988|emb|CBJ80775.1| cytochrome o ubiquinol oxidase, subunit IV [Xenorhabdus bovienii SS-2004] Length = 110 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 79/110 (71%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N + + +G+ K ++GFILS+ILT+IPF +VM G ++ + LT++ A+ Q Sbjct: 1 MSHPNT-SHSGADHGSFKTYMIGFILSVILTVIPFWMVMDGSA-SQSTILLTVIGMAVIQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I VH V FLHM+T E+ W+++A+IFT++++AI VGS+W+MY+LN NMM Sbjct: 59 IFVHFVCFLHMNTSSEERWNLVALIFTLLVIAIVVVGSLWIMYNLNINMM 108 >gi|120610894|ref|YP_970572.1| cytochrome C oxidase subunit IV [Acidovorax citrulli AAC00-1] gi|120589358|gb|ABM32798.1| cytochrome bo3 quinol oxidase subunit 4 [Acidovorax citrulli AAC00-1] Length = 142 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 48/104 (46%), Positives = 70/104 (67%) Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73 + T +VGF+LS+ILT IPF +VM D+N L + A+ QI+VH+V FLHM+ Sbjct: 26 HSTFSGYMVGFVLSVILTAIPFWLVMAKVISDRNTAVLVLGAFAVVQILVHMVCFLHMNG 85 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117 KVE GW++++ IFT++ VAI G++WVM+H+N NMM M + Sbjct: 86 KVEGGWTMLSTIFTVVFVAIAIAGTLWVMFHMNTNMMPEHTMPA 129 >gi|86360305|ref|YP_472193.1| cytochrome O ubiquinol oxidase, subunit IV protein [Rhizobium etli CFN 42] gi|86284407|gb|ABC93466.1| cytochrome O ubiquinol oxidase, subunit IV protein [Rhizobium etli CFN 42] Length = 133 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 52/118 (44%), Positives = 78/118 (66%), Gaps = 3/118 (2%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H +GT + + GF LS++LT IPF +VM G F + + ++ QI+ Sbjct: 16 HGHSHGHQA-GHGTFRSYMAGFALSVVLTAIPFWLVMAGVFASPAVTAVLVMAIGAVQIV 74 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 VH+VFFLHM+ + E GW++MA+IFT+I+VAI GS+WVM+HLN NMM M E M+++ Sbjct: 75 VHMVFFLHMNPRSEGGWTMMALIFTLIIVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132 >gi|163857711|ref|YP_001632009.1| hypothetical protein Bpet3398 [Bordetella petrii DSM 12804] gi|163261439|emb|CAP43741.1| conserved hypothetical protein [Bordetella petrii] Length = 125 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 2/116 (1%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 N H + ++ + L+GF L+ ILT IPF IVM F + L ++ AI QI+VH Sbjct: 9 NGHEEDPLAHASLHGYLLGFALAAILTAIPFFIVMANVFSSSRVTGLVLLALAIVQIVVH 68 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 +++FLH+ + E GW++++++FT+++V I GS+W+MYHL++NMM M MR++ Sbjct: 69 VIYFLHVDFQSEGGWNMLSIVFTLVLVVIALSGSIWIMYHLDHNMMPMSTHDMRNM 124 >gi|94314530|ref|YP_587739.1| cytochrome o ubiquinol oxidase subunit IV [Cupriavidus metallidurans CH34] gi|93358382|gb|ABF12470.1| cytochrome o ubiquinol oxidase subunit IV [Cupriavidus metallidurans CH34] gi|222831883|gb|EEE70360.1| predicted protein [Populus trichocarpa] Length = 142 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 42/98 (42%), Positives = 66/98 (67%) Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73 + T L GF+LS+ LT +PF +VM F + + I+L QI+VH+++FLHM+ Sbjct: 24 HATLGGYLTGFVLSVFLTAVPFWLVMGKVFEKSSTTAIAILLIGAVQIVVHMIYFLHMNA 83 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 K E GW++++++FT+ +V I GS+WVM+HLN+NMM Sbjct: 84 KSEGGWNMLSLMFTLTLVVITLTGSLWVMFHLNSNMMP 121 >gi|251790656|ref|YP_003005377.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya zeae Ech1591] gi|247539277|gb|ACT07898.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya zeae Ech1591] Length = 110 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 81/110 (73%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H+ S+G+ K LVGF+LS+ILT+IPFG+VM G N++ L ++ CAI Q Sbjct: 1 MSHS-THDHAGASHGSVKSYLVGFVLSIILTVIPFGLVMNGSA-SHNVILLAVLGCAIIQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLH++T E+ W+++A++FT +++AI VGS+W+M + ++NMM Sbjct: 59 ILVHLVYFLHLNTSSEERWNVVAIVFTALIIAIVVVGSLWIMMNAHHNMM 108 >gi|163867422|ref|YP_001608619.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella tribocorum CIP 105476] gi|161017066|emb|CAK00624.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella tribocorum CIP 105476] Length = 242 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 3/106 (2%) Query: 8 NMNMHSYG-TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQIIVH 64 +M ++ + L+GFIL++ T+ F VM G I + + A+ QIIV Sbjct: 2 SMQNETHSPSIGSYLIGFILAVFFTLGSFIPVMYGMMESWAISTKVVYLIGMALIQIIVQ 61 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +VFFLH+++ + W++ A+ F I V I G+ W + HLN NMM Sbjct: 62 IVFFLHLNSGPDAKWNLSALWFAAICVFIIVGGTWWAISHLNYNMM 107 >gi|99082127|ref|YP_614281.1| cytochrome C oxidase subunit IV [Ruegeria sp. TM1040] gi|99038407|gb|ABF65019.1| cytochrome C oxidase subunit IV [Ruegeria sp. TM1040] Length = 115 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 45/106 (42%), Positives = 67/106 (63%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M+ HS+G+ K +GF+LS+ILT+IPF +V+ + N I QIIVH+ +F Sbjct: 1 MSAHSHGSYKSYAIGFVLSVILTVIPFWLVLGEVDIGVNTAIAVIFGLGAVQIIVHMHYF 60 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG 114 LH++ EDGW +M+++FT I++ I GS+WVM HL+ NMM Sbjct: 61 LHVTYGAEDGWQVMSLVFTGILLIIVLAGSIWVMAHLHENMMPAHE 106 >gi|304414866|ref|ZP_07395784.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Regiella insecticola LSR1] gi|304283135|gb|EFL91549.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Regiella insecticola LSR1] Length = 108 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 50/104 (48%), Positives = 73/104 (70%), Gaps = 1/104 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + S+G+ K L+GF+LS+ILT+IPF +VM ++ T+V AI QIIVHLV+ Sbjct: 6 DHAGASHGSLKSYLIGFVLSIILTVIPFAMVMSNTA-SHTLILTTVVALAIVQIIVHLVY 64 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 FLHM+ E+ W++ A +FTI+++AI VGS+W+MY+LN NMM Sbjct: 65 FLHMNGSSEERWNLGAFLFTILVIAIIVVGSLWIMYNLNINMMP 108 >gi|255319502|ref|ZP_05360716.1| cytOchrome o ubiquinol oxidase subunit IV [Acinetobacter radioresistens SK82] gi|262378474|ref|ZP_06071631.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter radioresistens SH164] gi|255303442|gb|EET82645.1| cytOchrome o ubiquinol oxidase subunit IV [Acinetobacter radioresistens SK82] gi|262299759|gb|EEY87671.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter radioresistens SH164] Length = 123 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 52/110 (47%), Positives = 76/110 (69%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +D HN ++G KQ +GFILS+ILTIIPFG+VM G F + ++ I + A AQ Sbjct: 16 MSHD--HNSAGAAHGNFKQYTIGFILSVILTIIPFGMVMSGGFE-RGLLVTVIAITAAAQ 72 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 ++V LVFFLHM+ E W+++A I+T++ +AI VGS+W+M +L+ NMM Sbjct: 73 VLVQLVFFLHMNASSEQRWNVIAFIYTVLCIAILLVGSVWIMNYLHFNMM 122 >gi|295096783|emb|CBK85873.1| cytochrome bo3 quinol oxidase subunit 4 [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 108 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 54/110 (49%), Positives = 79/110 (71%), Gaps = 4/110 (3%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N H S+G+ K + GFILS+ILT+IPF +VM G K ++ I++ A+ Q Sbjct: 1 MSHSNDHG---ASHGSVKTYMTGFILSIILTVIPFWMVMNGSA-SKPVILGAILVTAVIQ 56 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+TK ++GW++ A IFT+I++AI VGS+W+M++LN NMM Sbjct: 57 ILVHLVCFLHMNTKSDEGWNMTAFIFTVIIIAILVVGSIWIMWNLNYNMM 106 >gi|156935022|ref|YP_001438938.1| hypothetical protein ESA_02873 [Cronobacter sakazakii ATCC BAA-894] gi|156533276|gb|ABU78102.1| hypothetical protein ESA_02873 [Cronobacter sakazakii ATCC BAA-894] Length = 109 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + HN +G K L+GFILS+ILT+IPF +VM G + +V A+ Q Sbjct: 1 MSHSTDHN--GAHHGGVKTYLIGFILSVILTVIPFWMVMNGSA-SHGTLLGVVVATAVVQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+ E+ W+++A +FT++++AI VGS+W+M++LN NMM Sbjct: 58 ILVHLVCFLHMNASSEERWNLVAFVFTLLIIAIVVVGSIWIMWNLNYNMM 107 >gi|325161734|gb|ADY89613.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas fluorescens] Length = 111 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 69/111 (62%), Gaps = 1/111 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H+ + S+G+ K +GFILS+ILT+IPFG+VM K++ ++ A+ Q Sbjct: 1 MANAHSHDSHDASHGSVKSYAIGFILSVILTVIPFGLVMYPSL-PKSLTLWIVLAFAVIQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 ++VHLV+FLH+ +++A +F I++ + S+W+M+ ++ NMM+ Sbjct: 60 VLVHLVYFLHLDRSAAQRNNVIAFVFAAIVIVLLVGLSLWIMFSIHTNMMA 110 >gi|260596797|ref|YP_003209368.1| cytochrome o ubiquinol oxidase protein cyoD [Cronobacter turicensis z3032] gi|260215974|emb|CBA28615.1| Cytochrome o ubiquinol oxidase protein cyoD [Cronobacter turicensis z3032] Length = 109 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + HN +G K L+GFILS+ILT+IPF +VM G + +V A+ Q Sbjct: 1 MSHSTDHN--GAHHGGVKTYLIGFILSVILTVIPFWMVMNGSA-SHGTLLGVVVATAVVQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+ E+ W+++A IFT++++AI VGS+W+M++LN NMM Sbjct: 58 ILVHLVCFLHMNASSEERWNLVAFIFTLLIIAIVVVGSIWIMWNLNYNMM 107 >gi|319403608|emb|CBI77193.1| Cytochrome o ubiquinol oxidase protein cyoD (modular protein) [Bartonella rochalimae ATCC BAA-1498] Length = 167 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 2/97 (2%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQIIVHLVFFLHMST 73 + LVGFIL+++ T+ F VM G I I + A+ QIIV +VFFLH+++ Sbjct: 11 SIGSYLVGFILAVLFTLGSFIPVMYGLLDSWAISTKVIYLIGMALIQIIVQIVFFLHLNS 70 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + W++ A++FT + V I G+ W + HLN NMM Sbjct: 71 GPDARWNLTALLFTAMCVFIIIGGTWWAISHLNYNMM 107 >gi|94314709|ref|YP_587918.1| cytochrome o ubiquinol oxidase subunit IV [Cupriavidus metallidurans CH34] gi|93358561|gb|ABF12649.1| cytochrome o ubiquinol oxidase subunit IV [Cupriavidus metallidurans CH34] Length = 121 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + S+G+ + L+G+ LS++LT++ FG VM G + + ++LC IAQ++V LVF Sbjct: 7 TAHESSHGSIRSHLIGYGLSVVLTLVSFGAVMSGVLPPGYGLAVIVLLC-IAQLLVQLVF 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 FLH+ + + T+ ++AI GS+WVM++ N NMM M+ M Sbjct: 66 FLHLGPRKGQRGNTAIFACTVFLIAIVVSGSLWVMHNANLNMMPMQSMP 114 >gi|271499589|ref|YP_003332614.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii Ech586] gi|270343144|gb|ACZ75909.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii Ech586] Length = 110 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 79/110 (71%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H+ S+G+ K L+GF+LS+ILT+IPFG+VM I+ T++ CA+ Q Sbjct: 1 MSHS-THDHAGASHGSVKSYLIGFVLSIILTVIPFGLVMNSSASHSAILL-TVLGCAVIQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLH++T E+ W+++A++FT +++AI VGS+W+M + ++NMM Sbjct: 59 ILVHLVYFLHLNTSSEERWNLVAIVFTALIIAIVVVGSIWIMMNAHHNMM 108 >gi|261341030|ref|ZP_05968888.1| cytochrome o ubiquinol oxidase, subunit IV [Enterobacter cancerogenus ATCC 35316] gi|296101550|ref|YP_003611696.1| cytochrome o ubiquinol oxidase operon protein cyoD [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|288316895|gb|EFC55833.1| cytochrome o ubiquinol oxidase, subunit IV [Enterobacter cancerogenus ATCC 35316] gi|295056009|gb|ADF60747.1| cytochrome o ubiquinol oxidase operon protein cyoD [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 108 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 54/110 (49%), Positives = 79/110 (71%), Gaps = 4/110 (3%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N H S+G+ K + GFILS+ILT+IPF +VM G K ++ I++ A+ Q Sbjct: 1 MSHSNDHG---ASHGSVKTYMTGFILSIILTVIPFWMVMSGSA-SKPVILGAILVTAVIQ 56 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+TK ++GW++ A IFT+I++AI VGS+W+M++LN NMM Sbjct: 57 ILVHLVCFLHMNTKSDEGWNMTAFIFTVIIIAILVVGSIWIMWNLNYNMM 106 >gi|268592045|ref|ZP_06126266.1| cytochrome o ubiquinol oxidase, subunit IV [Providencia rettgeri DSM 1131] gi|291312438|gb|EFE52891.1| cytochrome o ubiquinol oxidase, subunit IV [Providencia rettgeri DSM 1131] Length = 110 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 76/110 (69%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + S+G+ K L+GFILS+ILT+IPF +VM+G + + T+V A+ Q Sbjct: 1 MSHAKD-AHTGASHGSVKTYLIGFILSVILTVIPFWMVMEGTA-STSAILWTVVGMAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+T ++ W+++A +FT+++V I +GS+W+MY+LN NMM Sbjct: 59 ILVHLVCFLHMNTSSDERWNLVAFLFTMLIVGIVVIGSLWIMYNLNINMM 108 >gi|212709187|ref|ZP_03317315.1| hypothetical protein PROVALCAL_00220 [Providencia alcalifaciens DSM 30120] gi|212688099|gb|EEB47627.1| hypothetical protein PROVALCAL_00220 [Providencia alcalifaciens DSM 30120] Length = 110 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 76/110 (69%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + S+G+ K L+GFILS+ILT+IPF +VM G + ++ T+V A+ Q Sbjct: 1 MSHAKD-AHTGASHGSVKTYLIGFILSVILTVIPFWMVMNGTA-SQGVILATVVGMAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+T ++ W+++A +FT++++ I +GS+W+MY+LN NMM Sbjct: 59 ILVHLVCFLHMNTSSDERWNLIAFLFTMLIIGIVVIGSLWIMYNLNINMM 108 >gi|183601051|ref|ZP_02962544.1| hypothetical protein PROSTU_04673 [Providencia stuartii ATCC 25827] gi|188019390|gb|EDU57430.1| hypothetical protein PROSTU_04673 [Providencia stuartii ATCC 25827] Length = 110 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 45/103 (43%), Positives = 74/103 (71%), Gaps = 1/103 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 S+G+ K ++GF+LS+ILT+IPF +VM+G + + T+V A+ QI+VHLV Sbjct: 7 AHTGASHGSMKTYVIGFVLSVILTVIPFWMVMEGTA-SQATILWTVVGMAVVQILVHLVC 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 FLHM+T ++ W+++A +FT++++ I +GS+W+MY+LN NMM Sbjct: 66 FLHMNTSSDERWNLIAFLFTMLIIGIVVIGSLWIMYNLNINMM 108 >gi|194289183|ref|YP_002005090.1| cytochrome o ubiquinol oxidase subunit iv [Cupriavidus taiwanensis LMG 19424] gi|193223018|emb|CAQ69023.1| cytochrome o ubiquinol oxidase, subunit IV [Cupriavidus taiwanensis LMG 19424] Length = 122 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 44/109 (40%), Positives = 72/109 (66%), Gaps = 1/109 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + H+ + + + K +GFIL++ILT+IPF IVM G DK + TI+ A+ Q+IV Sbjct: 15 SHAHDSHAGGHASFKGYAIGFILAVILTVIPFKIVMDGTM-DKGTILWTILGMAVVQMIV 73 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112 HL +FLH+ + E +++A++FT +++ I GS+W+M++LN NMM M Sbjct: 74 HLKYFLHLDSSSEQRSNVIALLFTALILVIVVAGSLWIMHNLNANMMVM 122 >gi|103486990|ref|YP_616551.1| cytochrome C oxidase subunit IV [Sphingopyxis alaskensis RB2256] gi|98977067|gb|ABF53218.1| cytochrome C oxidase subunit IV [Sphingopyxis alaskensis RB2256] Length = 128 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 1/113 (0%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + H + T + ++GF+LS+ILT IPF +VM I+ A+ QI+VH Sbjct: 9 HGHGEIEMPHATMRDYVIGFVLSVILTAIPFWLVMTMPL-SAGTTGAIIMAFAVVQIVVH 67 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117 +VFFLHM+ K E GWS+ +++FT+I+V I GS+WVM+HLN NMM M + Sbjct: 68 MVFFLHMTPKAEGGWSLTSLVFTVIVVVIMLAGSLWVMHHLNTNMMPMPHEPT 120 >gi|317492923|ref|ZP_07951347.1| cytochrome o ubiquinol oxidase subunit IV protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919045|gb|EFV40380.1| cytochrome o ubiquinol oxidase subunit IV protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 116 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 51/115 (44%), Positives = 78/115 (67%), Gaps = 6/115 (5%) Query: 1 MKYDNIHNMN-----MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVL 55 M + + S+G+ K ++GFILS+ILT+IPF +VM+G + I+ T+V Sbjct: 1 MSHSPTTGHHSTDNNGASHGSAKSYMIGFILSVILTVIPFWMVMEGTASHQTILI-TVVA 59 Query: 56 CAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 A+ QI VHLV+FLHM+T E+ W+++A+ FT +++AI VGS+W+MY+LN NMM Sbjct: 60 MAVIQIFVHLVYFLHMNTSSEERWNLIALAFTALIIAIVVVGSLWIMYNLNINMM 114 >gi|293607337|ref|ZP_06689676.1| quinol oxidase subunit IV [Achromobacter piechaudii ATCC 43553] gi|292814181|gb|EFF73323.1| quinol oxidase subunit IV [Achromobacter piechaudii ATCC 43553] Length = 139 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 51/105 (48%), Positives = 72/105 (68%), Gaps = 2/105 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K + GFIL+ ILT IPF +VM F L I+ A+ QI+VH+++FLHM TK Sbjct: 34 TLKSYVTGFILAAILTAIPFWLVMDRVFASSRTTALVILAFAVVQIVVHIIYFLHMDTKS 93 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 E GW+++A+IFT+++V I GS+W+MYHLN+NMM M MR++ Sbjct: 94 ESGWNMLALIFTLVLVVITLSGSIWIMYHLNSNMMPMSTHDMRNM 138 >gi|226952679|ref|ZP_03823143.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. ATCC 27244] gi|294649993|ref|ZP_06727381.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter haemolyticus ATCC 19194] gi|226836585|gb|EEH68968.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. ATCC 27244] gi|292824086|gb|EFF82901.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter haemolyticus ATCC 19194] Length = 109 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 52/107 (48%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + HN S+G KQ VGFILS+ILTIIPFG+VM G F + I+ I + A+AQ++V Sbjct: 3 SHDHNAAGASHGNVKQYTVGFILSVILTIIPFGMVMAGGF-SRGILVTVIAITAVAQVLV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 LV+FLHM+T + W+++A I+TI+ +A+ VGS+W+M +L+ NMM Sbjct: 62 QLVYFLHMNTSSDQRWNLIAFIYTILCIAVLLVGSVWIMNYLHYNMM 108 >gi|117617963|ref|YP_857447.1| cytochrome o ubiquinol oxidase subunit IV [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559370|gb|ABK36318.1| cytochrome O ubiquinol oxidase protein CyoD [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 110 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 50/107 (46%), Positives = 77/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 ++ + + S+G+ K L+GF+LSLILT +PF +VM G + T+V A+ QI V Sbjct: 3 NHTVDNHGASHGSAKSYLIGFVLSLILTAVPFWMVMDGSA-SHTTVLATVVGMAVVQIFV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV+FLHM+T E+ W+++A+IFT++++AI VGS+W+MY+LN NMM Sbjct: 62 HLVYFLHMNTSSEERWNLVALIFTVLIIAIVVVGSLWIMYNLNINMM 108 >gi|332160740|ref|YP_004297317.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604619|emb|CBY26117.1| cytochrome O ubiquinol oxidase subunit IV [Yersinia enterocolitica subsp. palearctica Y11] gi|325664970|gb|ADZ41614.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859963|emb|CBX70292.1| cytochrome o ubiquinol oxidase protein cyoD [Yersinia enterocolitica W22703] Length = 115 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 1/103 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 S+G+ K ++GFILS+ILT+IPF +VM G + T+V A+ QIIVHLV+ Sbjct: 12 THGGASHGSLKSYIIGFILSVILTVIPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVY 70 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 FLHM+ E+ W+++A +FT +++AI VGS+W+MY+LN NMM Sbjct: 71 FLHMNGSSEERWNLVAFLFTAMIIAIVVVGSLWIMYNLNINMM 113 >gi|254700860|ref|ZP_05162688.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella suis bv. 5 str. 513] gi|261751370|ref|ZP_05995079.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis bv. 5 str. 513] gi|261741123|gb|EEY29049.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis bv. 5 str. 513] Length = 121 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 44/109 (40%), Positives = 74/109 (67%), Gaps = 1/109 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + ++G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+VHL++ Sbjct: 7 THDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQILVHLIY 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M Sbjct: 66 FLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMLMYMTP 114 >gi|241663143|ref|YP_002981503.1| cytochrome O ubiquinol oxidase subunit IV [Ralstonia pickettii 12D] gi|309781939|ref|ZP_07676670.1| ubiquinol oxidase subunit IV [Ralstonia sp. 5_7_47FAA] gi|240865170|gb|ACS62831.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12D] gi|308919283|gb|EFP64949.1| ubiquinol oxidase subunit IV [Ralstonia sp. 5_7_47FAA] Length = 141 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 46/98 (46%), Positives = 67/98 (68%) Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73 + T L GF+LS+ LT IPF +VM F + +TI+L QI+VH++FFLHM+ Sbjct: 27 HATLGGYLTGFVLSVFLTAIPFWLVMANVFDRSSTTAVTILLIGAVQIVVHMIFFLHMNA 86 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 K E GW++++++FT+++V I GS+WVMYHLN NMM Sbjct: 87 KSEGGWNMLSLMFTLVLVVITLSGSLWVMYHLNTNMMP 124 >gi|45440613|ref|NP_992152.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar Microtus str. 91001] gi|51595299|ref|YP_069490.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pseudotuberculosis IP 32953] gi|108808652|ref|YP_652568.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis Antiqua] gi|108811089|ref|YP_646856.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis Nepal516] gi|145600061|ref|YP_001164137.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis Pestoides F] gi|149364987|ref|ZP_01887022.1| cytochrome O ubiquinol oxidase subunit [Yersinia pestis CA88-4125] gi|153949808|ref|YP_001402061.1| cytochrome O ubiquinol oxidase subunit IV [Yersinia pseudotuberculosis IP 31758] gi|162420623|ref|YP_001607429.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis Angola] gi|165935892|ref|ZP_02224462.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar Orientalis str. IP275] gi|166011041|ref|ZP_02231939.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar Antiqua str. E1979001] gi|166212919|ref|ZP_02238954.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar Antiqua str. B42003004] gi|167423433|ref|ZP_02315186.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469782|ref|ZP_02334486.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis FV-1] gi|170025461|ref|YP_001721966.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pseudotuberculosis YPIII] gi|186894316|ref|YP_001871428.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pseudotuberculosis PB1/+] gi|218930197|ref|YP_002348072.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis CO92] gi|229838772|ref|ZP_04458931.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896074|ref|ZP_04511244.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis Pestoides A] gi|229899340|ref|ZP_04514483.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar Orientalis str. India 195] gi|229901316|ref|ZP_04516438.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis Nepal516] gi|294504897|ref|YP_003568959.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis Z176003] gi|45435470|gb|AAS61029.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis biovar Microtus str. 91001] gi|51588581|emb|CAH20189.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pseudotuberculosis IP 32953] gi|108774737|gb|ABG17256.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis Nepal516] gi|108780565|gb|ABG14623.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis Antiqua] gi|115348808|emb|CAL21762.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis CO92] gi|145211757|gb|ABP41164.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis Pestoides F] gi|149291400|gb|EDM41474.1| cytochrome O ubiquinol oxidase subunit [Yersinia pestis CA88-4125] gi|152961303|gb|ABS48764.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pseudotuberculosis IP 31758] gi|162353438|gb|ABX87386.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis Angola] gi|165916037|gb|EDR34644.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar Orientalis str. IP275] gi|165990041|gb|EDR42342.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar Antiqua str. E1979001] gi|166205706|gb|EDR50186.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar Antiqua str. B42003004] gi|167057603|gb|EDR67349.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751995|gb|ACA69513.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pseudotuberculosis YPIII] gi|186697342|gb|ACC87971.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pseudotuberculosis PB1/+] gi|229681245|gb|EEO77339.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis Nepal516] gi|229687742|gb|EEO79815.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar Orientalis str. India 195] gi|229695138|gb|EEO85185.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700997|gb|EEO89026.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis Pestoides A] gi|262362963|gb|ACY59684.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis D106004] gi|262366882|gb|ACY63439.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis D182038] gi|294355356|gb|ADE65697.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis Z176003] gi|320016354|gb|ADV99925.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 110 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 76/110 (69%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + S+G+ K ++GF+LS+ILT+IPF +VM G LT+V A+ Q Sbjct: 1 MSHSTT-THGGASHGSLKSYIIGFVLSVILTVIPFVMVMSGTA-SYTTTLLTVVGLAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLHM+T E+ W+++A++FT +++AI VGS+W+MY+LN NMM Sbjct: 59 IVVHLVYFLHMNTSSEERWNLVALLFTAMIIAIVVVGSLWIMYNLNINMM 108 >gi|330821325|ref|YP_004350187.1| Ubiquinol oxidase, subunit IV [Burkholderia gladioli BSR3] gi|327373320|gb|AEA64675.1| Ubiquinol oxidase, subunit IV [Burkholderia gladioli BSR3] Length = 113 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 46/112 (41%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Query: 1 MKYDNIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + H+ + S+GT LVGF+LS+ILT FG+V+ G+F M + + + A Sbjct: 1 MAHSPAHDGHDDASHGTVSSYLVGFVLSVILTAASFGVVLGGWFASTTTMVIALAVLAAV 60 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 QI+VHL+FFLHM+T W++ A ++T++ V I VGS+W+M++++ NMMS Sbjct: 61 QIVVHLIFFLHMNTSSGQRWNLTAFVYTVLTVGIVIVGSLWIMHNVSMNMMS 112 >gi|283784255|ref|YP_003364120.1| cytochrome o ubiquinol oxidase subunit IV [Citrobacter rodentium ICC168] gi|282947709|emb|CBG87264.1| cytochrome o ubiquinol oxidase subunit IV [Citrobacter rodentium ICC168] Length = 109 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 52/110 (47%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N H S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q Sbjct: 1 MSHSNDHG--GASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-GVILGTILAMAVVQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 58 ILVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|238897313|ref|YP_002922990.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465068|gb|ACQ66842.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 132 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 48/101 (47%), Positives = 72/101 (71%), Gaps = 1/101 (0%) Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69 G+ K +VGFILS++LT+IPF +VM + ++ T++ A+ QIIVHLV+FL Sbjct: 31 GGAHQGSLKSYVVGFILSVMLTVIPFMMVMNQSA-SRTVILATVIATAVVQIIVHLVYFL 89 Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HM+ E+ W+++A IFT+I++AI VGS+W+M+HLN NMM Sbjct: 90 HMNGASEERWNLVAFIFTVIIIAIVLVGSLWIMHHLNINMM 130 >gi|113867094|ref|YP_725583.1| bo3-type quinol oxidase, subunit IV [Ralstonia eutropha H16] gi|113525870|emb|CAJ92215.1| bo3-type quinol oxidase, subunit IV [Ralstonia eutropha H16] Length = 122 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 71/112 (63%), Gaps = 2/112 (1%) Query: 2 KYDNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 +D+ + H + + K +GFIL++ILT+IPF +VM G DK + I+ A Q Sbjct: 12 AHDSHDSHAGHDTHASFKSYAIGFILAVILTVIPFKLVMDGSM-DKGTILWIILGMAAVQ 70 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112 I+VHL +FLH+ T E +++A++FT +++ I GS+W+M++LN NMM M Sbjct: 71 ILVHLKYFLHLDTSSEQRSNVIALLFTALILVIVVAGSLWIMHNLNANMMVM 122 >gi|311280674|ref|YP_003942905.1| cytochrome o ubiquinol oxidase subunit IV [Enterobacter cloacae SCF1] gi|308749869|gb|ADO49621.1| cytochrome o ubiquinol oxidase subunit IV [Enterobacter cloacae SCF1] Length = 108 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 77/110 (70%), Gaps = 4/110 (3%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H S+G+ K + GFILS+ILT+IPF +VM G + T+++ A+ Q Sbjct: 1 MSHSTDHG---ASHGSVKTYMTGFILSIILTLIPFWMVMNGSA-SHVALLGTVLVSAVVQ 56 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+TK ++GW++ A +FT++++AI +GS+W+M++LN NMM Sbjct: 57 ILVHLVCFLHMNTKSDEGWNLTAFVFTVLIIAIVVIGSIWIMWNLNYNMM 106 >gi|319407993|emb|CBI81647.1| Cytochrome o ubiquinol oxidase subunit IV [Bartonella schoenbuchensis R1] Length = 190 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 8/110 (7%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQ 60 +D HN + LVGFIL++ T+ F VM G + I + A+ Q Sbjct: 2 HDKAHNPSTI------SYLVGFILAVFFTLGSFIPVMYGMLDSWAVSTKVIYLIGMALIQ 55 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+V +VFFLH+++ + W+ + + F + V I G+ W + HLN NMM Sbjct: 56 IVVQIVFFLHLNSGPDAKWNWITLWFAAMCVFIIIGGTWWAISHLNYNMM 105 >gi|319795348|ref|YP_004156988.1| cytochrome o ubiquinol oxidase subunit iv [Variovorax paradoxus EPS] gi|315597811|gb|ADU38877.1| cytochrome o ubiquinol oxidase subunit IV [Variovorax paradoxus EPS] Length = 136 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 51/108 (47%), Positives = 74/108 (68%), Gaps = 2/108 (1%) Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS 72 S+ T K + GF+L++ILT IPF +VM F + N L I+ A QI+VH+++FLHM Sbjct: 28 SHSTFKGYMTGFVLAVILTAIPFWLVMGKVFANTNTTSLIILGFAAVQIVVHMIYFLHMD 87 Query: 73 TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 K E GW+++A+IFTI++V I GS+WVMYH+N NMM M M+++ Sbjct: 88 AKSESGWNMLALIFTIVLVVITLAGSLWVMYHMNTNMMPMSVHDMKNM 135 >gi|238025053|ref|YP_002909285.1| Ubiquinol oxidase subunit IV [Burkholderia glumae BGR1] gi|237879718|gb|ACR32050.1| Ubiquinol oxidase, subunit IV [Burkholderia glumae BGR1] Length = 113 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 45/112 (40%), Positives = 72/112 (64%), Gaps = 1/112 (0%) Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + + H + + S+GT LVGF+LS+ILT FG+V+ G+F + L + + A Sbjct: 1 MAHSHTHASHDDASHGTVSSYLVGFVLSVILTAASFGVVLGGWFSTNEVKILVLAVLAAV 60 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 QI+VHL+FFLHM+ W++ A +T++ V I VGS+W+M++++ NMMS Sbjct: 61 QIVVHLIFFLHMNGSSSQRWNVTAFAYTVLTVGIVIVGSLWIMHNVSINMMS 112 >gi|77460866|ref|YP_350373.1| cytochrome C oxidase subunit IV [Pseudomonas fluorescens Pf0-1] gi|77384869|gb|ABA76382.1| cytochrome bo3 quinol oxidase subunit 4 [Pseudomonas fluorescens Pf0-1] Length = 111 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 68/111 (61%), Gaps = 1/111 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H+ + +G+ K +GFILS+ILT+IPFG+VM K+ ++L A+ Q Sbjct: 1 MANAHSHDSHDAGHGSVKSYAIGFILSVILTVIPFGLVMYPTL-PKSTTLAIVLLFAVIQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +IVHL +FLH+ + +++A +FT I++ + S+W+M+ ++ MM+ Sbjct: 60 VIVHLYYFLHLDRSIAQRNNVIAFVFTAIVIVLLVGLSLWIMFSIHTYMMA 110 >gi|70732357|ref|YP_262113.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas fluorescens Pf-5] gi|68346656|gb|AAY94262.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens Pf-5] Length = 109 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 1/107 (0%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 N H+ + +G+ K +GFILS+ILT+IPFG+VM K++ ++ A+ Q++VH Sbjct: 3 NTHSHDEAGHGSVKSYAIGFILSVILTLIPFGLVMYPSL-PKDVTLWIVLAFAVIQVLVH 61 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 LV+FLH+ +++A IF +++ + S+W+M+ ++ MM+ Sbjct: 62 LVYFLHLDRSEAQRNNVVAFIFAALVIVLLVGLSLWIMFSIHTVMMA 108 >gi|317403926|gb|EFV84395.1| cytochrome ubiquinol oxidase subunit IV [Achromobacter xylosoxidans C54] Length = 132 Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats. Identities = 50/105 (47%), Positives = 72/105 (68%), Gaps = 2/105 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K + GF+L+ ILT IPF +VM F L I+ A+ QI+VH+++FLHM TK Sbjct: 27 TLKSYVTGFVLAAILTAIPFWLVMDRVFASSRTTALVILAFAVVQIVVHIIYFLHMDTKS 86 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 E GW+++A+IFT+++V I GS+W+MYHLN+NMM M MR++ Sbjct: 87 ESGWNMLALIFTLVLVVITLSGSIWIMYHLNSNMMPMSVHDMRNM 131 >gi|17546580|ref|NP_519982.1| transmembrane cytochrome O ubiquinol oxidase subunit IV [Ralstonia solanacearum GMI1000] gi|17428879|emb|CAD15563.1| probable transmembrane cytochrome o ubiquinol oxidase (subunit iv) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 125 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 1/109 (0%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 +H +G+ + VG +LS+ LT+ F VM G + + + LC +AQ++V L Sbjct: 9 VHAGETAPHGSLRGYTVGLLLSVALTLAAFATVMTGALPARLALAGMVGLC-VAQLLVQL 67 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG 114 V+FLH+ T + + T +++AI GS+WVM++ N NMM + Sbjct: 68 VYFLHLGTGPGQRGNTAIFVCTGLLIAIVVAGSLWVMHNANENMMPTDM 116 >gi|299769502|ref|YP_003731528.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. DR1] gi|298699590|gb|ADI90155.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. DR1] Length = 109 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 52/107 (48%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + HN S+G KQ VGFILS+ILTIIPFG+VM G F + I+ I + A+AQ++V Sbjct: 3 SHDHNAAGASHGNFKQYTVGFILSVILTIIPFGMVMAGGF-SRGILVTVIAIAAVAQVLV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 LV+FLHM+T E W+++A I+TI+ +A+ +GS+W+M +L+ NMM Sbjct: 62 QLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLIGSVWIMNYLHYNMM 108 >gi|320540328|ref|ZP_08039980.1| cytochrome o ubiquinol oxidase subunit IV [Serratia symbiotica str. Tucson] gi|320029648|gb|EFW11675.1| cytochrome o ubiquinol oxidase subunit IV [Serratia symbiotica str. Tucson] Length = 112 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 46/111 (41%), Positives = 75/111 (67%), Gaps = 2/111 (1%) Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + + + S+G+ K L+GFILS+ILT+IPF +VM + +V A+ Sbjct: 1 MSHSSHETSHGGASHGSVKSYLIGFILSIILTVIPFAMVMNDSA-SHATILAVVVGTAVI 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q++VHL++FLHM+T E+ W+++A++FT +++ I VGS+W+MY+LN NMM Sbjct: 60 QVLVHLIYFLHMNTSSEERWNLVALLFTAMVIGIVVVGSLWIMYNLNINMM 110 >gi|330811629|ref|YP_004356091.1| cytochrome o subunit VI [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379737|gb|AEA71087.1| Cytochrome o subunit VI [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 111 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 69/111 (62%), Gaps = 1/111 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H+ + +G+ K +GFILS+ILT+IPFG+VM K++ +++ A+ Q Sbjct: 1 MANAHSHDGHDAGHGSVKSYAIGFILSVILTVIPFGLVMYPSL-PKSLTLWIVLIFAVVQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 ++VHLV+FLH+ +++A +F I++ + S+W+M+ ++ NMM+ Sbjct: 60 VLVHLVYFLHLDRSAAQRNNVVAFVFAAIVIVLLVGLSLWIMFSIHTNMMA 110 >gi|319783410|ref|YP_004142886.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169298|gb|ADV12836.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 126 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 52/115 (45%), Positives = 76/115 (66%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 ++ H + ++G+ L GF LS++LT +PF +VM ++ + I+ A+ QIIV Sbjct: 11 NHSHAHHGVNHGSLAGYLTGFGLSVVLTAVPFWLVMTNALGNQMASAIAIMAFAVVQIIV 70 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118 H+VFFLHM+T+ E GW++MA+IFT+I+V I GS+WVMYHLN NMM M I Sbjct: 71 HMVFFLHMNTRSESGWTMMALIFTLILVMIALTGSLWVMYHLNVNMMPGHDMSQI 125 >gi|145299868|ref|YP_001142709.1| cytochrome o ubiquinol oxidase subunit IV [Aeromonas salmonicida subsp. salmonicida A449] gi|142852640|gb|ABO90961.1| cytochrome O ubiquinol oxidase protein CyoD [Aeromonas salmonicida subsp. salmonicida A449] Length = 110 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 51/107 (47%), Positives = 79/107 (73%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + + + S+G+ K L+GF+LS+ILT IPF +VM G F + M +T+V A+ QI V Sbjct: 3 THSVDNHGASHGSAKSYLIGFVLSVILTAIPFWMVMDGGFTHQ-TMLITVVAMAVVQIFV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV+FLHM+T E+ W+++A++FT++++AI VGS+W+MY+LN NMM Sbjct: 62 HLVYFLHMNTSSEERWNLVALVFTVLIIAIVVVGSLWIMYNLNINMM 108 >gi|312962953|ref|ZP_07777439.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens WH6] gi|311282722|gb|EFQ61317.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens WH6] Length = 111 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 69/111 (62%), Gaps = 1/111 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H+ + S+G+ K +GFILS+ILT+IPFG+VM K+I + ++ A+ Q Sbjct: 1 MANAHSHDSHDASHGSVKSYAIGFILSVILTLIPFGLVMYPTL-PKSITLMIVLAFAVIQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 ++VHLV+FLH+ +++A +F +++ + S+W+M+ ++ MM+ Sbjct: 60 VLVHLVYFLHLDRSEAQRENVIAFVFAGLVIVLLVGLSLWIMFSIHTYMMA 110 >gi|238920118|ref|YP_002933633.1| cytochrome o ubiquinol oxidase subunit IV [Edwardsiella ictaluri 93-146] gi|238869687|gb|ACR69398.1| cytochrome o ubiquinol oxidase subunit IV, putative [Edwardsiella ictaluri 93-146] Length = 112 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 2/111 (1%) Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + + + +G K L+GFILS++LT+IPF +VM G + +V A+ Sbjct: 1 MSHSSHETSHGGAGHGGVKSYLIGFILSIVLTVIPFAVVMSGGVAHSTTL-AVVVGMAVI 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q+IVHLV FLHM+T + W+++A++FT +++ I VGS+W+MY+LN NMM Sbjct: 60 QVIVHLVCFLHMNTSSQGRWNLVALLFTAVIIGIVVVGSLWIMYNLNINMM 110 >gi|319406525|emb|CBI80167.1| Cytochrome o ubiquinol oxidase protein cyoD (modular protein) [Bartonella sp. 1-1C] Length = 158 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQIIVHLVFFLHMST 73 + LVGFIL+++ T+ F VM G I I + A+ QIIV +VFFLH+++ Sbjct: 9 SIGSYLVGFILAVLFTLGSFIPVMYGLLDSWAISTKVIYLIGMALIQIIVQIVFFLHLNS 68 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + W++ A++FT + I G+ W + HLN NMM Sbjct: 69 GPDARWNLTALLFTAMCAFIIIGGTWWAISHLNYNMM 105 >gi|17224969|gb|AAL37191.1|AF321090_3 cytochrome o ubiquinol oxidase D [Pseudomonas putida] Length = 111 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 67/111 (60%), Gaps = 1/111 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H+ + +G+ K +GF LS+ILT+IPFG+VM K+ ++L A+ Q Sbjct: 1 MANAHSHDSHDAGHGSVKSYAIGFSLSVILTVIPFGLVMYPTL-PKSTTLAIVLLFAVIQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +IVHL +FLH+ + +++A +FT I++ + S+W+M+ ++ MM+ Sbjct: 60 VIVHLYYFLHLDRSIAQRNNVIAFVFTAIVIVLLVGLSLWIMFSIHTYMMA 110 >gi|332290095|ref|YP_004420947.1| cytochrome o ubiquinol oxidase subunit IV [Gallibacterium anatis UMN179] gi|330432991|gb|AEC18050.1| cytochrome o ubiquinol oxidase subunit IV [Gallibacterium anatis UMN179] Length = 110 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 71/111 (63%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M YDN H+ +G+ K L+GF LS+ILT+IPF +VM G K + + I + A+ Q Sbjct: 1 MSYDN-HDYAATEHGSVKSYLIGFGLSVILTLIPFLMVMNGSA-SKMSLLVIIAVTAVIQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +IV LV FLHM T + W++++ IFT I++ + S+W+M+ LN NMM+ Sbjct: 59 LIVQLVCFLHMGTSEDGRWNLISFIFTAIVILLLVALSIWIMWSLNANMMA 109 >gi|13475709|ref|NP_107276.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium loti MAFF303099] gi|14026465|dbj|BAB53062.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium loti MAFF303099] Length = 125 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 54/104 (51%), Positives = 73/104 (70%), Gaps = 1/104 (0%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K L+GF+LS+ILT IPF +VM G +K + I+ A+ QI+VH+VFFLHM T Sbjct: 21 SFKGYLIGFVLSVILTAIPFWLVMSGAIDNKQATAIVIMAFAVVQIVVHMVFFLHMKTAS 80 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS-MEGMRSI 118 E GWS++A+IFT+I+V I GS+WVMYHLN NMM + MR + Sbjct: 81 EGGWSMLALIFTLILVVIVLTGSLWVMYHLNANMMPGLHDMREM 124 >gi|187734216|ref|YP_001879139.1| cytochrome o ubiquinol oxidase subunit IV [Shigella boydii CDC 3083-94] gi|187431208|gb|ACD10482.1| cytochrome o ubiquinol oxidase, subunit IV [Shigella boydii CDC 3083-94] Length = 109 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 77/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI A+ Q Sbjct: 1 MSHSTDH--SGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTIRAMAVVQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 ++VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 58 VLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|184158692|ref|YP_001847031.1| Heme/copper-type cytochrome/quinol oxidase subunit 4 [Acinetobacter baumannii ACICU] gi|213158554|ref|YP_002319852.1| cytochrome O ubiquinol oxidase subunit IV [Acinetobacter baumannii AB0057] gi|215482993|ref|YP_002325198.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii AB307-0294] gi|239501440|ref|ZP_04660750.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii AB900] gi|293609458|ref|ZP_06691760.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|301345100|ref|ZP_07225841.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii AB056] gi|301510828|ref|ZP_07236065.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii AB058] gi|301595309|ref|ZP_07240317.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii AB059] gi|332850731|ref|ZP_08432978.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii 6013150] gi|332866968|ref|ZP_08437285.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii 6013113] gi|332873684|ref|ZP_08441627.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii 6014059] gi|183210286|gb|ACC57684.1| Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Acinetobacter baumannii ACICU] gi|193077738|gb|ABO12596.2| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii ATCC 17978] gi|213057714|gb|ACJ42616.1| cytochrome O ubiquinol oxidase subunit IV [Acinetobacter baumannii AB0057] gi|213988781|gb|ACJ59080.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii AB307-0294] gi|292827910|gb|EFF86273.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|322507498|gb|ADX02952.1| cyoD [Acinetobacter baumannii 1656-2] gi|323518606|gb|ADX92987.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii TCDC-AB0715] gi|325122720|gb|ADY82243.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter calcoaceticus PHEA-2] gi|332730568|gb|EGJ61884.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii 6013150] gi|332734297|gb|EGJ65425.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii 6013113] gi|332738072|gb|EGJ68956.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii 6014059] Length = 109 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 51/107 (47%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + HN S+G KQ VGFILS+ILTIIPFG+VM G F + ++ I + A+AQ++V Sbjct: 3 SHEHNAAGASHGNFKQYTVGFILSVILTIIPFGMVMAGGF-SRGLLVTVIAITAVAQVLV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 LV+FLHM+T E W+++A I+TI+ +A+ +GS+W+M +L+ NMM Sbjct: 62 QLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLIGSVWIMNYLHYNMM 108 >gi|283834252|ref|ZP_06353993.1| cytochrome o ubiquinol oxidase, subunit IV [Citrobacter youngae ATCC 29220] gi|291069774|gb|EFE07883.1| cytochrome o ubiquinol oxidase, subunit IV [Citrobacter youngae ATCC 29220] Length = 109 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ QI+V Sbjct: 2 SHSNESGGASHGSVKTYMTGFILSIILTVIPFWMVMTGSASP-AVILGTILAMAVVQILV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV FLHM++K ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 61 HLVCFLHMNSKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|260426875|ref|ZP_05780854.1| cytOchrome o ubiquinol oxidase subunit IV [Citreicella sp. SE45] gi|260421367|gb|EEX14618.1| cytOchrome o ubiquinol oxidase subunit IV [Citreicella sp. SE45] Length = 128 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 46/112 (41%), Positives = 75/112 (66%), Gaps = 1/112 (0%) Query: 5 NIHNMNM-HSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + H+ + H +GT Q ++GF L+ ILTIIPF +VM L + + I+ QIIV Sbjct: 2 SAHSHSESHGHGTMGQLMIGFALAAILTIIPFFLVMVDTGLSRTALVGIIMGLGAVQIIV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115 HLV+FLH+++ E+GW+++A +F+++++ I GS+WVM+++N NMM M M Sbjct: 62 HLVYFLHLNSSSEEGWTLLASMFSVVILVIVLAGSLWVMHNMNENMMPMPDM 113 >gi|157146955|ref|YP_001454274.1| cytochrome o ubiquinol oxidase subunit IV [Citrobacter koseri ATCC BAA-895] gi|157084160|gb|ABV13838.1| hypothetical protein CKO_02732 [Citrobacter koseri ATCC BAA-895] Length = 109 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q Sbjct: 1 MSHSTDH--SGASHGSVKTYMTGFILSIILTVIPFWMVMTGTGSP-AVILGTILAMAVVQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 58 ILVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|15800159|ref|NP_286171.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 EDL933] gi|15829737|ref|NP_308510.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. Sakai] gi|16128414|ref|NP_414963.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str. K-12 substr. MG1655] gi|24111811|ref|NP_706321.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2a str. 301] gi|30061928|ref|NP_836099.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2a str. 2457T] gi|74311004|ref|YP_309423.1| cytochrome o ubiquinol oxidase subunit IV [Shigella sonnei Ss046] gi|82542917|ref|YP_406864.1| cytochrome o ubiquinol oxidase subunit IV [Shigella boydii Sb227] gi|89107299|ref|AP_001079.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str. K-12 substr. W3110] gi|110804456|ref|YP_687976.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 5 str. 8401] gi|157157013|ref|YP_001461615.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli E24377A] gi|157159954|ref|YP_001457272.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli HS] gi|168749891|ref|ZP_02774913.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4113] gi|168756971|ref|ZP_02781978.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4401] gi|168761635|ref|ZP_02786642.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4501] gi|168776265|ref|ZP_02801272.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4196] gi|168800312|ref|ZP_02825319.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC508] gi|170021199|ref|YP_001726153.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli ATCC 8739] gi|170080015|ref|YP_001729335.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str. K-12 substr. DH10B] gi|170683697|ref|YP_001742570.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli SMS-3-5] gi|188496374|ref|ZP_03003644.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli 53638] gi|191166691|ref|ZP_03028518.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli B7A] gi|193065222|ref|ZP_03046295.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli E22] gi|195938504|ref|ZP_03083886.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. EC4024] gi|208815375|ref|ZP_03256554.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4045] gi|209395894|ref|YP_002269075.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4115] gi|209917645|ref|YP_002291729.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli SE11] gi|218549903|ref|YP_002383694.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia fergusonii ATCC 35469] gi|218552995|ref|YP_002385908.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli IAI1] gi|218693892|ref|YP_002401559.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 55989] gi|218698659|ref|YP_002406288.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli IAI39] gi|218703712|ref|YP_002411231.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli UMN026] gi|238899717|ref|YP_002925513.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli BW2952] gi|253774583|ref|YP_003037414.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160498|ref|YP_003043606.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B str. REL606] gi|254791613|ref|YP_003076450.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. TW14359] gi|256020399|ref|ZP_05434264.1| cytochrome o ubiquinol oxidase subunit IV [Shigella sp. D9] gi|256023954|ref|ZP_05437819.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia sp. 4_1_40B] gi|260842630|ref|YP_003220408.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O103:H2 str. 12009] gi|260853652|ref|YP_003227543.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O26:H11 str. 11368] gi|260866590|ref|YP_003232992.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O111:H- str. 11128] gi|261223910|ref|ZP_05938191.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. FRIK2000] gi|261256376|ref|ZP_05948909.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. FRIK966] gi|291281336|ref|YP_003498154.1| Cytochrome O ubiquinol oxidase protein CyoD [Escherichia coli O55:H7 str. CB9615] gi|293403549|ref|ZP_06647640.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli FVEC1412] gi|293408578|ref|ZP_06652417.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B354] gi|293413684|ref|ZP_06656333.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B185] gi|293418499|ref|ZP_06660934.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B088] gi|297516402|ref|ZP_06934788.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli OP50] gi|298379161|ref|ZP_06989042.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli FVEC1302] gi|300818242|ref|ZP_07098453.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 107-1] gi|300820328|ref|ZP_07100480.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 119-7] gi|300900497|ref|ZP_07118664.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 198-1] gi|300903306|ref|ZP_07121234.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 84-1] gi|300918190|ref|ZP_07134797.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 115-1] gi|300924154|ref|ZP_07140146.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 182-1] gi|300930271|ref|ZP_07145684.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 187-1] gi|300957994|ref|ZP_07170159.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS 175-1] gi|301022580|ref|ZP_07186452.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 69-1] gi|301301577|ref|ZP_07207712.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 124-1] gi|301330705|ref|ZP_07223307.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 78-1] gi|301647352|ref|ZP_07247164.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS 146-1] gi|307137072|ref|ZP_07496428.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli H736] gi|307312193|ref|ZP_07591829.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli W] gi|309794841|ref|ZP_07689262.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 145-7] gi|331661808|ref|ZP_08362731.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA143] gi|331666783|ref|ZP_08367657.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA271] gi|331681823|ref|ZP_08382456.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H299] gi|78099997|sp|P0ABJ7|CYOD_ECO57 RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD; Short=Ubiquinol oxidase chain D gi|78099998|sp|P0ABJ6|CYOD_ECOLI RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD; Short=Ubiquinol oxidase chain D gi|78099999|sp|P0ABJ8|CYOD_SHIFL RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD; Short=Ubiquinol oxidase chain D gi|12513288|gb|AAG54779.1|AE005222_4 cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. EDL933] gi|145655|gb|AAA23634.1| cytochrome o ubiquinol oxidase C subunit [Escherichia coli] gi|1786632|gb|AAC73532.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str. K-12 substr. MG1655] gi|13359940|dbj|BAB33906.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. Sakai] gi|24050601|gb|AAN42028.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2a str. 301] gi|30040172|gb|AAP15905.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2a str. 2457T] gi|73854481|gb|AAZ87188.1| cytochrome o ubiquinol oxidase subunit IV [Shigella sonnei Ss046] gi|81244328|gb|ABB65036.1| cytochrome o ubiquinol oxidase subunit IV [Shigella boydii Sb227] gi|85674569|dbj|BAE76209.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str. K12 substr. W3110] gi|110614004|gb|ABF02671.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 5 str. 8401] gi|157065634|gb|ABV04889.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli HS] gi|157079043|gb|ABV18751.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli E24377A] gi|169756127|gb|ACA78826.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli ATCC 8739] gi|169887850|gb|ACB01557.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str. K-12 substr. DH10B] gi|170521415|gb|ACB19593.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli SMS-3-5] gi|187768304|gb|EDU32148.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4196] gi|188015898|gb|EDU54020.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4113] gi|188491573|gb|EDU66676.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli 53638] gi|189356033|gb|EDU74452.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4401] gi|189368086|gb|EDU86502.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4501] gi|189377391|gb|EDU95807.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC508] gi|190903202|gb|EDV62924.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli B7A] gi|192927196|gb|EDV81817.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli E22] gi|208732023|gb|EDZ80711.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4045] gi|209157294|gb|ACI34727.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli O157:H7 str. EC4115] gi|209743934|gb|ACI70274.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli] gi|209743936|gb|ACI70275.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli] gi|209743938|gb|ACI70276.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli] gi|209743940|gb|ACI70277.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli] gi|209743942|gb|ACI70278.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli] gi|209910904|dbj|BAG75978.1| cytochrome O ubiquinol oxidase subunit IV [Escherichia coli SE11] gi|218350624|emb|CAU96316.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 55989] gi|218357444|emb|CAQ90083.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia fergusonii ATCC 35469] gi|218359763|emb|CAQ97304.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli IAI1] gi|218368645|emb|CAR16384.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli IAI39] gi|218430809|emb|CAR11683.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli UMN026] gi|238860710|gb|ACR62708.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli BW2952] gi|242376210|emb|CAQ30901.1| cytochrome bo terminal oxidase subunit IV, subunit of cytochrome bo terminal oxidase [Escherichia coli BL21(DE3)] gi|253325627|gb|ACT30229.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972399|gb|ACT38070.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B str. REL606] gi|253976609|gb|ACT42279.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli BL21(DE3)] gi|254591013|gb|ACT70374.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. TW14359] gi|257752301|dbj|BAI23803.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O26:H11 str. 11368] gi|257757777|dbj|BAI29274.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O103:H2 str. 12009] gi|257762946|dbj|BAI34441.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O111:H- str. 11128] gi|260450384|gb|ACX40806.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli DH1] gi|281599765|gb|ADA72749.1| Cytochrome O ubiquinol oxidase protein CyoD [Shigella flexneri 2002017] gi|284920239|emb|CBG33298.1| cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D) [Escherichia coli 042] gi|290761209|gb|ADD55170.1| Cytochrome O ubiquinol oxidase protein CyoD [Escherichia coli O55:H7 str. CB9615] gi|291325027|gb|EFE64442.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B088] gi|291429402|gb|EFF02422.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli FVEC1412] gi|291433742|gb|EFF06715.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B185] gi|291471756|gb|EFF14239.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B354] gi|298280274|gb|EFI21778.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli FVEC1302] gi|300315330|gb|EFJ65114.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS 175-1] gi|300355978|gb|EFJ71848.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 198-1] gi|300397461|gb|EFJ80999.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 69-1] gi|300404601|gb|EFJ88139.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 84-1] gi|300414641|gb|EFJ97951.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 115-1] gi|300419607|gb|EFK02918.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 182-1] gi|300461843|gb|EFK25336.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 187-1] gi|300527113|gb|EFK48182.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 119-7] gi|300529133|gb|EFK50195.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 107-1] gi|300843074|gb|EFK70834.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 124-1] gi|300843366|gb|EFK71126.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 78-1] gi|301074497|gb|EFK89303.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS 146-1] gi|306907695|gb|EFN38197.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli W] gi|308121494|gb|EFO58756.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 145-7] gi|313646949|gb|EFS11406.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2a str. 2457T] gi|315059709|gb|ADT74036.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli W] gi|315135111|dbj|BAJ42270.1| cytochrome O ubiquinol oxidase protein CyoD [Escherichia coli DH1] gi|315256254|gb|EFU36222.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 85-1] gi|320173753|gb|EFW48936.1| Cytochrome O ubiquinol oxidase subunit IV [Shigella dysenteriae CDC 74-1112] gi|320192843|gb|EFW67483.1| Cytochrome O ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. EC1212] gi|320638423|gb|EFX08137.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. G5101] gi|320643803|gb|EFX12926.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H- str. 493-89] gi|320649154|gb|EFX17732.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H- str. H 2687] gi|320656047|gb|EFX23963.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661197|gb|EFX28628.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O55:H7 str. USDA 5905] gi|320665173|gb|EFX32266.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. LSU-61] gi|323184741|gb|EFZ70112.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 1357] gi|323379726|gb|ADX51994.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli KO11] gi|323938614|gb|EGB34863.1| cytochrome o ubiquinol oxidase IV [Escherichia coli E1520] gi|323943235|gb|EGB39391.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli E482] gi|323945333|gb|EGB41389.1| cytochrome o ubiquinol oxidase IV [Escherichia coli H120] gi|323963418|gb|EGB58980.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli H489] gi|323965115|gb|EGB60574.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli M863] gi|323972282|gb|EGB67492.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli TA007] gi|323976087|gb|EGB71180.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli TW10509] gi|324016711|gb|EGB85930.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 117-3] gi|324114656|gb|EGC08624.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia fergusonii B253] gi|324116916|gb|EGC10829.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli E1167] gi|326341191|gb|EGD64983.1| Cytochrome O ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. 1044] gi|326346034|gb|EGD69773.1| Cytochrome O ubiquinol oxidase subunit IV [Escherichia coli O157:H7 str. 1125] gi|327254755|gb|EGE66371.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli STEC_7v] gi|331060230|gb|EGI32194.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA143] gi|331066007|gb|EGI37891.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA271] gi|331081025|gb|EGI52190.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H299] gi|332341792|gb|AEE55126.1| cytochrome O ubiquinol oxidase subunit IV CyoD [Escherichia coli UMNK88] Length = 109 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q Sbjct: 1 MSHSTDH--SGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 ++VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 58 VLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|332094584|gb|EGI99630.1| cytochrome o ubiquinol oxidase subunit IV [Shigella boydii 5216-82] Length = 109 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 78/107 (72%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + + + S+G+ K ++GFILS+ILT+IPF +VM G ++ TI+ A+ Q++V Sbjct: 2 SHSTDHSGASHGSVKTYMIGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQVLV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|157369330|ref|YP_001477319.1| cytochrome o ubiquinol oxidase subunit IV [Serratia proteamaculans 568] gi|157321094|gb|ABV40191.1| Cytochrome o ubiquinol oxidase subunit IV [Serratia proteamaculans 568] Length = 112 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 48/111 (43%), Positives = 77/111 (69%), Gaps = 2/111 (1%) Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + + + S+G+ K L+GFILS+ILT+IPF +VM G I+ +V A+ Sbjct: 1 MSHSSHETSHGGASHGSVKTYLIGFILSIILTVIPFAMVMSGTASHSTIL-AVVVGMAVI 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q++VHL++FLHM+T E+ W+++A++FT +++ I VGS+W+MY+LN NMM Sbjct: 60 QVVVHLIYFLHMNTSSEERWNLVALLFTAMIIGIVVVGSLWIMYNLNINMM 110 >gi|213621013|ref|ZP_03373796.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 105 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 73/105 (69%), Gaps = 1/105 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + S+G+ K + GFILS+ILT+IPF +VM G ++ +I+ A+ QI+V Sbjct: 2 SHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASP-AVILGSILAMAVVQILV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 HLV FLHM+TK ++GW++ A IFT++++AI VGS+W+M++LN N Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFIFTVLIIAILVVGSIWIMWNLNYN 105 >gi|94309896|ref|YP_583106.1| cytochrome c oxidase subunit IV [Cupriavidus metallidurans CH34] gi|93353748|gb|ABF07837.1| Cytochrome o ubiquinol oxidase subunit IV [Cupriavidus metallidurans CH34] gi|222871193|gb|EEF08324.1| predicted protein [Populus trichocarpa] Length = 116 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 66/102 (64%), Gaps = 1/102 (0%) Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69 H + + K ++GF+L++ILT+IPF IVM G + M I+ A QI+VHL +FL Sbjct: 13 ASHGHSSVKSYVIGFVLAVILTVIPFKIVMDGTME-RGTMLWIILGMAAVQIVVHLKYFL 71 Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 H+ W++MA++FT++++ I GS+W+M+++N NMM Sbjct: 72 HLDGSNGQRWNVMALLFTVLILFIVLAGSLWIMHNMNANMMP 113 >gi|325291581|ref|YP_004277445.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium sp. H13-3] gi|325059434|gb|ADY63125.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium sp. H13-3] Length = 131 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 44/98 (44%), Positives = 69/98 (70%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K ++GF++S+ILT IPF +VM +K ++ + I+ + QI VH+++FLHM TK Sbjct: 26 TFKSYMIGFVMSVILTAIPFWLVMGDVLENKTLLVIAIMGLGVIQIFVHMIYFLHMDTKS 85 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113 E GW+ MA+IFT++++ I GS+WVMY++N NMM + Sbjct: 86 EGGWTFMALIFTVVVLLITLSGSLWVMYNMNKNMMPLH 123 >gi|222107117|ref|YP_002547908.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium vitis S4] gi|221738296|gb|ACM39192.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium vitis S4] Length = 132 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 50/100 (50%), Positives = 73/100 (73%) Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS 72 S+G+ K ++GFILS+ LT IPF +VM G +K ++ ++ Q++VH+++FLHM+ Sbjct: 24 SHGSMKTYMIGFILSVTLTSIPFYLVMSGSLTNKALLAGIVMGLGAIQVVVHMIYFLHMN 83 Query: 73 TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112 TK E GW++MA+IFTII+V I GS+WVM+HLN NMM M Sbjct: 84 TKSEGGWNMMALIFTIIVVVIALSGSLWVMHHLNTNMMPM 123 >gi|329890316|ref|ZP_08268659.1| cytochrome o ubiquinol oxidase subunit IV [Brevundimonas diminuta ATCC 11568] gi|328845617|gb|EGF95181.1| cytochrome o ubiquinol oxidase subunit IV [Brevundimonas diminuta ATCC 11568] Length = 128 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 50/103 (48%), Positives = 72/103 (69%), Gaps = 1/103 (0%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K L+GF LS++LT IPF +VM G + + L I A+ QI+VH++FFLHM+ K Sbjct: 26 TYKGYLIGFGLSVVLTAIPFWLVMAGVLAPQ-LTGLIITAFAVVQIVVHMIFFLHMNHKS 84 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118 E GW+++A+IFT+++V I GS+WVMYHLN NMM + M+ + Sbjct: 85 EGGWNMLALIFTLVIVVIAVAGSVWVMYHLNTNMMPVHDMQGM 127 >gi|238754225|ref|ZP_04615582.1| hypothetical protein yruck0001_21740 [Yersinia ruckeri ATCC 29473] gi|238707472|gb|EEP99832.1| hypothetical protein yruck0001_21740 [Yersinia ruckeri ATCC 29473] Length = 110 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 52/110 (47%), Positives = 78/110 (70%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + S+G+ K L+GFILS+ILT+IPF +VM+G ++ T+V A+ Q Sbjct: 1 MSHSTT-GHGGASHGSLKSYLIGFILSIILTVIPFVMVMQGTA-SHTMILATVVTLAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 IIVHLV+FLHM+ K E+ W+++A +FT++++AI VGS+W+MY+LN NMM Sbjct: 59 IIVHLVYFLHMNGKSEERWNLVAFLFTVMIIAIVVVGSLWIMYNLNINMM 108 >gi|220924640|ref|YP_002499942.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium nodulans ORS 2060] gi|219949247|gb|ACL59639.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium nodulans ORS 2060] Length = 130 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 46/104 (44%), Positives = 69/104 (66%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + + GF+LS ILT IPF +VM D+ + ++ A+ QI+VH+V+FLHM+T+ Sbjct: 24 TFEGYVTGFVLSAILTAIPFWLVMANVLDDRVQTTIAVLAFAVIQIVVHMVYFLHMNTRS 83 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 E GW+++A+IFT+ +V I GS+WVM+HLN NMM + H Sbjct: 84 EGGWTVLALIFTVTLVVITLTGSIWVMHHLNTNMMPLSAEHVRH 127 >gi|270263562|ref|ZP_06191831.1| cytochrome o ubiquinol oxidase subunit IV [Serratia odorifera 4Rx13] gi|270042446|gb|EFA15541.1| cytochrome o ubiquinol oxidase subunit IV [Serratia odorifera 4Rx13] Length = 112 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 49/111 (44%), Positives = 77/111 (69%), Gaps = 2/111 (1%) Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + + + S+G+ K L+GFILS+ILT+IPF +VM G I+ +V A+ Sbjct: 1 MSHSSHETSHGGASHGSVKSYLIGFILSIILTVIPFAMVMSGTASHSTIL-AVVVGMAVI 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q+IVHL++FLHM+T E+ W+++A++FT +++ I VGS+W+MY+LN NMM Sbjct: 60 QVIVHLIYFLHMNTSSEERWNLVALLFTAMIIGIVVVGSLWIMYNLNINMM 110 >gi|91209498|ref|YP_539484.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli UTI89] gi|110640689|ref|YP_668417.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 536] gi|215485510|ref|YP_002327941.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O127:H6 str. E2348/69] gi|218557338|ref|YP_002390251.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli S88] gi|218688292|ref|YP_002396504.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli ED1a] gi|237707577|ref|ZP_04538058.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia sp. 3_2_53FAA] gi|300997384|ref|ZP_07181724.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS 200-1] gi|91071072|gb|ABE05953.1| cytochrome O ubiquinol oxidase protein CyoD [Escherichia coli UTI89] gi|110342281|gb|ABG68518.1| cytochrome O ubiquinol oxidase C subunit [Escherichia coli 536] gi|215263582|emb|CAS07912.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O127:H6 str. E2348/69] gi|218364107|emb|CAR01772.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli S88] gi|218425856|emb|CAR06662.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli ED1a] gi|222032224|emb|CAP74963.1| Cytochrome o ubiquinol oxidase protein cyoD [Escherichia coli LF82] gi|226898787|gb|EEH85046.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia sp. 3_2_53FAA] gi|281177599|dbj|BAI53929.1| cytochrome O ubiquinol oxidase subunit IV [Escherichia coli SE15] gi|294494005|gb|ADE92761.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli IHE3034] gi|300304203|gb|EFJ58723.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS 200-1] gi|307628102|gb|ADN72406.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli UM146] gi|312945006|gb|ADR25833.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O83:H1 str. NRG 857C] gi|315289856|gb|EFU49246.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 110-3] gi|315299551|gb|EFU58799.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 16-3] gi|323952959|gb|EGB48827.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli H252] gi|323958622|gb|EGB54325.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli H263] gi|324010059|gb|EGB79278.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS 57-2] gi|324010689|gb|EGB79908.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 60-1] Length = 109 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 49/107 (45%), Positives = 77/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + + + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ QI+V Sbjct: 2 SHSNASSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQILV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|306813105|ref|ZP_07447298.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli NC101] gi|331656484|ref|ZP_08357446.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA206] gi|305853868|gb|EFM54307.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli NC101] gi|331054732|gb|EGI26741.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA206] Length = 109 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 77/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + + + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q++V Sbjct: 2 SHSNASSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQVLV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|17547633|ref|NP_521035.1| transmembrane cytochrome O ubiquinol oxidase subunit IV [Ralstonia solanacearum GMI1000] gi|17429937|emb|CAD16621.1| probable transmembrane cytochrome o ubiquinol oxidase (subunit iv) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 121 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 43/106 (40%), Positives = 71/106 (66%), Gaps = 1/106 (0%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + H + T K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VH Sbjct: 15 HGHATGGAGHATVKGYLIGFVLAVILTVIPFKMVMGGGFSHDTVLV-TVMGLAVVQIVVH 73 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 L++FLH+ W++MA +FT++++ I VGS+WVM+++N NMM Sbjct: 74 LIYFLHLDGSSAQRWNVMAFLFTLLILVIVIVGSLWVMHNMNVNMM 119 >gi|222084384|ref|YP_002542913.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium radiobacter K84] gi|221721832|gb|ACM24988.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium radiobacter K84] Length = 133 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 56/110 (50%), Positives = 77/110 (70%), Gaps = 2/110 (1%) Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70 S+GT K + GF+LS+ILT IPF +VM F D + I++ QIIVH+++FLH Sbjct: 23 EASHGTFKSYMTGFVLSVILTAIPFWLVMGKVFADPVVTAALIMVFGAIQIIVHMIYFLH 82 Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM--MSMEGMRSI 118 M+TK E GW++MA+IFTI++V I GS+WVM+HLN NM MS E MR++ Sbjct: 83 MNTKSEGGWNMMALIFTIVLVIIALSGSLWVMHHLNANMMVMSPEMMRNM 132 >gi|253687435|ref|YP_003016625.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754013|gb|ACT12089.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 110 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 78/110 (70%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + S+G+ K ++GF+LS+ILT+IPF +VM G N + T+V CA+ Q Sbjct: 1 MSHSTT-DHSGASHGSVKSYVIGFVLSVILTVIPFSMVMSGTA-SHNAILFTVVGCAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLH++T E+ W+++A++F ++++AI VGS+W+M ++NMM Sbjct: 59 ILVHLVYFLHLNTSSEERWNVVALVFAVLIIAIVVVGSIWIMMSAHHNMM 108 >gi|152980590|ref|YP_001354327.1| cytochrome o ubiquinol oxidase operon protein [Janthinobacterium sp. Marseille] gi|151280667|gb|ABR89077.1| cytochrome o ubiquinol oxidase operon protein [Janthinobacterium sp. Marseille] Length = 149 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 49/96 (51%), Positives = 67/96 (69%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K +GFILS+ILT IPF +VM F + I+ A QI+VH+V+FLHM+TK Sbjct: 28 SLKSYTIGFILSVILTAIPFWLVMGKVFDSSSTTAFVILGFAAVQIVVHMVYFLHMNTKS 87 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 E GWS++ +IFTI++V I GS+WVMYH+N+NMM Sbjct: 88 EGGWSMLGLIFTIMVVVIMLAGSIWVMYHMNHNMMP 123 >gi|213425865|ref|ZP_03358615.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 109 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 49/107 (45%), Positives = 74/107 (69%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + S+G+ K + GFILS+ILT+IPF +VM G ++ +I+ A+ QI+V Sbjct: 2 SHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASP-AVILGSILAMAVVQILV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV FLHM+TK ++GW++ A IFT +++AI VGS+W+M++LN NMM Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFIFTALIIAILVVGSIWIMWNLNYNMM 107 >gi|227113457|ref|ZP_03827113.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327520|ref|ZP_03831544.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 110 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 78/110 (70%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + S+G+ K ++GF+LS+ILT+IPF +VM G I+ T+V CA+ Q Sbjct: 1 MSHSTT-DHSGASHGSVKSYVIGFVLSVILTVIPFSMVMSGTASHSAILF-TVVGCAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLH++T E+ W+++A++F ++++AI VGS+W+M ++NMM Sbjct: 59 ILVHLVYFLHLNTSSEERWNVVALVFAVLIIAIVVVGSIWIMMSAHHNMM 108 >gi|311108526|ref|YP_003981379.1| cytochrome O ubiquinol oxidase subunit IV 2 [Achromobacter xylosoxidans A8] gi|310763215|gb|ADP18664.1| cytochrome O ubiquinol oxidase subunit IV 2 [Achromobacter xylosoxidans A8] Length = 134 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 72/105 (68%), Gaps = 2/105 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K + GF+L+ +LT IPF +VM F + L I+ A+ QI+VH+++FLHM TK Sbjct: 29 TFKSYMTGFVLAAVLTAIPFWLVMGRVFTESRTTALVILAFAVVQIVVHIIYFLHMDTKS 88 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 E GW+++A+IFT+++V I GS+W+MYHL++NMM M MR + Sbjct: 89 ESGWNMLALIFTLVLVVITLSGSIWIMYHLDSNMMPMSTHDMRKM 133 >gi|73540688|ref|YP_295208.1| cytochrome C oxidase subunit IV [Ralstonia eutropha JMP134] gi|72118101|gb|AAZ60364.1| Prokaryotic Cytochrome C oxidase subunit IV [Ralstonia eutropha JMP134] Length = 116 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 66/102 (64%), Gaps = 1/102 (0%) Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69 H + + K +GF+L++ILT+IPF IVM G D+ L I+ A Q++VHL +FL Sbjct: 12 ESHGHSSFKSYAIGFVLAVILTVIPFKIVMDGTM-DRGTTLLIILGMAAVQVVVHLKYFL 70 Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HM E W++M+ +FT++++ I GS+W+M+++N NMM Sbjct: 71 HMDGSKEQRWNVMSFLFTLLILFIVLAGSLWIMHNMNANMMP 112 >gi|170767810|ref|ZP_02902263.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia albertii TW07627] gi|170123298|gb|EDS92229.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia albertii TW07627] Length = 109 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 77/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + + S+G+ K + GFILS+ILT+IPF +VM G ++ TI++ A+ Q++V Sbjct: 2 SHSNASGGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILVMAVVQVLV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|50085513|ref|YP_047023.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. ADP1] gi|49531489|emb|CAG69201.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. ADP1] Length = 108 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 53/110 (48%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +D HN S+G KQ +GFILS++LTIIPFG+VM G F + ++ I + A+AQ Sbjct: 1 MSHD--HNSAGASHGNFKQYTIGFILSVVLTIIPFGMVMAGGF-GRGLLMTVIGITAVAQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 ++V LVFFLHM+T E W+++A I+T++ +AI VGS+W+M +L+ NMM Sbjct: 58 VLVQLVFFLHMNTSSEQRWNLIAFIYTVLCIAILLVGSVWIMNYLHFNMM 107 >gi|167563463|ref|ZP_02356379.1| ubiquinol oxidase, subunit IV [Burkholderia oklahomensis EO147] Length = 110 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + H+ ++GT + GF+LS++LT FG+VM G + + + + A AQ Sbjct: 1 MAHTH-HSYGDEAHGTVGGYIAGFVLSVLLTAASFGLVMGGVLPPREALVS-LAVLAGAQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+T W++MA +T++ I G++WVM+++N NMMS Sbjct: 59 IVVHLVYFLHMNTSSSQRWNVMAFSYTVLTALILIFGTLWVMHNVNMNMMS 109 >gi|16759420|ref|NP_455037.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763821|ref|NP_459436.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142808|ref|NP_806150.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414404|ref|YP_151479.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179052|ref|YP_215469.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161504383|ref|YP_001571495.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|161615370|ref|YP_001589335.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551747|ref|ZP_02345500.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992292|ref|ZP_02573390.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232415|ref|ZP_02657473.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237552|ref|ZP_02662610.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240264|ref|ZP_02665196.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261126|ref|ZP_02683099.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465531|ref|ZP_02699413.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818951|ref|ZP_02830951.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446490|ref|YP_002039682.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450588|ref|YP_002044475.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470587|ref|ZP_03076571.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737366|ref|YP_002113471.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250726|ref|YP_002145421.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264545|ref|ZP_03164619.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363324|ref|YP_002142961.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243661|ref|YP_002214394.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389690|ref|ZP_03216301.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927364|ref|ZP_03218566.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207855920|ref|YP_002242571.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213023462|ref|ZP_03337909.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052103|ref|ZP_03344981.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213416725|ref|ZP_03349869.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213584681|ref|ZP_03366507.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213649241|ref|ZP_03379294.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857960|ref|ZP_03384931.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224582278|ref|YP_002636076.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911428|ref|ZP_04655265.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825082|ref|ZP_06544434.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25331177|pir||AC0557 cytochrome o ubiquinol oxidase C chain [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418947|gb|AAL19395.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501711|emb|CAD08899.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29138440|gb|AAO70010.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128661|gb|AAV78167.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62126685|gb|AAX64388.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|160865730|gb|ABX22353.1| hypothetical protein SARI_02494 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|161364734|gb|ABX68502.1| hypothetical protein SPAB_03141 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405153|gb|ACF65375.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408892|gb|ACF69111.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456951|gb|EDX45790.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712868|gb|ACF92089.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631677|gb|EDX50197.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094801|emb|CAR60334.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214429|gb|ACH51826.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242800|gb|EDY25420.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289479|gb|EDY28842.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938177|gb|ACH75510.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602135|gb|EDZ00681.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204324029|gb|EDZ09224.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323488|gb|EDZ11327.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329509|gb|EDZ16273.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333521|gb|EDZ20285.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340021|gb|EDZ26785.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344082|gb|EDZ30846.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349794|gb|EDZ36425.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707723|emb|CAR32008.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224466805|gb|ACN44635.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245723|emb|CBG23520.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992153|gb|ACY87038.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157051|emb|CBW16535.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911473|dbj|BAJ35447.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084713|emb|CBY94504.1| Cytochrome o ubiquinol oxidase protein cyoD Ubiquinol oxidase chain D [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226016|gb|EFX51067.1| Cytochrome O ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614718|gb|EFY11647.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618824|gb|EFY15712.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623531|gb|EFY20370.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629171|gb|EFY25950.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631891|gb|EFY28645.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637372|gb|EFY34074.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642057|gb|EFY38667.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647876|gb|EFY44351.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652554|gb|EFY48908.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653284|gb|EFY49617.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660567|gb|EFY56803.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664719|gb|EFY60912.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669228|gb|EFY65378.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670773|gb|EFY66906.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678988|gb|EFY75043.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682016|gb|EFY78041.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685155|gb|EFY81152.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713513|gb|EFZ05084.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128759|gb|ADX16189.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192952|gb|EFZ78175.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196966|gb|EFZ82108.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203951|gb|EFZ88968.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206964|gb|EFZ91917.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210818|gb|EFZ95690.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214509|gb|EFZ99260.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223066|gb|EGA07409.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227015|gb|EGA11196.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230167|gb|EGA14287.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233905|gb|EGA17994.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238401|gb|EGA22459.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244089|gb|EGA28098.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246249|gb|EGA30232.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251875|gb|EGA35738.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257872|gb|EGA41551.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261115|gb|EGA44707.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264955|gb|EGA48454.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272518|gb|EGA55925.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622142|gb|EGE28487.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987389|gb|AEF06372.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 109 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 49/107 (45%), Positives = 75/107 (70%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + S+G+ K + GFILS+ILT+IPF +VM G ++ +I+ A+ QI+V Sbjct: 2 SHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASP-AVILGSILAMAVVQILV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV FLHM+TK ++GW++ A IFT++++AI VGS+W+M++LN NMM Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFIFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|224826961|ref|ZP_03700059.1| cytochrome o ubiquinol oxidase subunit IV [Lutiella nitroferrum 2002] gi|224600794|gb|EEG06979.1| cytochrome o ubiquinol oxidase subunit IV [Lutiella nitroferrum 2002] Length = 107 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 4/111 (3%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H S+G+ K L GF+LS+ILT+IPF +VM G + + TI A+ Q Sbjct: 1 MSQAHDH---AASHGSVKSYLTGFVLSVILTVIPFWLVMNGNLNPHDTLL-TIAGFAVVQ 56 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHL +FLH+ E + +A +FT +++ + S+W+++ + MM Sbjct: 57 ILVHLKYFLHLDFTTEGRVNTLAFLFTALVIVLLVGLSVWIIFSADALMMP 107 >gi|50120079|ref|YP_049246.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium atrosepticum SCRI1043] gi|261822515|ref|YP_003260621.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium wasabiae WPP163] gi|49610605|emb|CAG74050.1| cytochrome O ubiquinol oxidase subunit IV [Pectobacterium atrosepticum SCRI1043] gi|261606528|gb|ACX89014.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium wasabiae WPP163] Length = 110 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 77/110 (70%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + S+G+ K ++GF+LS+ILT+IPF +VM G N + T+V CA+ Q Sbjct: 1 MSHSTT-DHAGASHGSVKSYVIGFVLSVILTVIPFSMVMSGTA-SHNAILFTVVGCAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLH++T E+ W+++A++F ++++AI VGS+W+M ++NMM Sbjct: 59 ILVHLVYFLHLNTSSEERWNVVALVFAVLIIAIVVVGSIWIMMSAHHNMM 108 >gi|322834054|ref|YP_004214081.1| cytochrome o ubiquinol oxidase subunit IV [Rahnella sp. Y9602] gi|321169255|gb|ADW74954.1| cytochrome o ubiquinol oxidase subunit IV [Rahnella sp. Y9602] Length = 110 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 76/110 (69%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + S+G+ K +GFILS+ILT+IPF +VM +++ T+V AI Q Sbjct: 1 MSHSAT-SHGGASHGSLKSYAIGFILSVILTVIPFAMVMTDTA-SHSLILGTVVASAIIQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLVFFLHM+T E+ W+++A++FT +++ I VGS+W+MY+LN NMM Sbjct: 59 IVVHLVFFLHMNTSSEERWNLVALLFTAVIIFIVVVGSLWIMYNLNLNMM 108 >gi|26246435|ref|NP_752474.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli CFT073] gi|227884562|ref|ZP_04002367.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 83972] gi|300988018|ref|ZP_07178498.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 45-1] gi|301049630|ref|ZP_07196581.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS 185-1] gi|26106833|gb|AAN79018.1|AE016756_201 Cytochrome O ubiquinol oxidase protein cyoD [Escherichia coli CFT073] gi|227838648|gb|EEJ49114.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 83972] gi|300298623|gb|EFJ55008.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS 185-1] gi|300407570|gb|EFJ91108.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 45-1] gi|307552335|gb|ADN45110.1| cytochrome o ubiquinol oxidase protein CyoD [Escherichia coli ABU 83972] gi|315294192|gb|EFU53543.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 153-1] Length = 109 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N+ S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q Sbjct: 1 MSHSNV--SGGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 58 ILVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|300937043|ref|ZP_07151909.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 21-1] gi|300457874|gb|EFK21367.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 21-1] Length = 109 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N+ S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q Sbjct: 1 MSHSNV--SGGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 ++VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 58 VLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|160899494|ref|YP_001565076.1| cytochrome o ubiquinol oxidase subunit IV [Delftia acidovorans SPH-1] gi|160365078|gb|ABX36691.1| cytochrome o ubiquinol oxidase subunit IV [Delftia acidovorans SPH-1] Length = 146 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 45/104 (43%), Positives = 69/104 (66%) Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73 + T + GF+LS+ILT IPF +VM D+ + + A+ QI+VH+VFFLHM+ Sbjct: 30 HSTFSGYMWGFVLSIILTAIPFWLVMSNVISDRATAVMVLGGFAVVQILVHMVFFLHMNG 89 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117 K+E GW++++ IFT++ VAI G++WVM+H+N NMM M + Sbjct: 90 KIEGGWTLLSTIFTVVFVAIGIAGTLWVMFHMNTNMMPQHTMPA 133 >gi|91775645|ref|YP_545401.1| cytochrome C oxidase subunit IV [Methylobacillus flagellatus KT] gi|91709632|gb|ABE49560.1| cytochrome bo3 quinol oxidase subunit 4 [Methylobacillus flagellatus KT] Length = 112 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 80/110 (72%), Gaps = 1/110 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + ++ + + K ++GF+LS+ILT+IPFG++M L + + +TI++ A+ Q Sbjct: 1 MSHGHV-ERAGAGHASVKSYIIGFVLSVILTVIPFGLLMFPNDLSSSTILVTILVFAVVQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLHM+T E W++MA IFT+I++AI VGS+WVM+HLN+NMM Sbjct: 60 IVVHLVYFLHMNTSSEQSWNVMAFIFTVIILAIVVVGSLWVMFHLNHNMM 109 >gi|218679506|ref|ZP_03527403.1| putative cytochrome o ubiquinol oxidase protein CyoD [Rhizobium etli CIAT 894] Length = 133 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 1/105 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H +GT K + GF+LS+ILT IPF +VM G + + ++ QI+ Sbjct: 16 HGHSHGHQA-GHGTFKSYMAGFVLSVILTAIPFWLVMSGVIASPALTAVLVMGLGAVQIV 74 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNN 107 VH++FFLHM+T+ E GW+IMA+IFT+I+VAI GS+WVM+HLN Sbjct: 75 VHMIFFLHMNTRSEGGWTIMALIFTLIIVAIALSGSLWVMHHLNT 119 >gi|205351751|ref|YP_002225552.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271532|emb|CAR36350.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626786|gb|EGE33129.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 109 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 49/107 (45%), Positives = 75/107 (70%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + S+G+ K + GFILS+ILT+IPF +VM G ++ +I+ A+ QI+V Sbjct: 2 SHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASP-AVILGSILAMAVLQILV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV FLHM+TK ++GW++ A IFT++++AI VGS+W+M++LN NMM Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFIFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|114327937|ref|YP_745094.1| cytochrome O ubiquinol oxidase protein cyoD [Granulibacter bethesdensis CGDNIH1] gi|114316111|gb|ABI62171.1| cytochrome O ubiquinol oxidase protein cyoD [Granulibacter bethesdensis CGDNIH1] Length = 126 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 + + + + S+G+ ++GFILS+ILT F IV + ++++ + A+ QI Sbjct: 4 AHAHGASDHGSSHGSVGSYIIGFILSVILTAAAFLIVAYK-LVPEHLILPGVAALAVIQI 62 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 +VHLVFFLHM+ E W++ A +F+++++ I GS+W+MY+L + M Sbjct: 63 LVHLVFFLHMNASSEQRWNVTAFVFSVVVLLILVSGSIWIMYNLTSRM 110 >gi|163857014|ref|YP_001631312.1| cytochrome 0 ubiquinol oxidase [Bordetella petrii DSM 12804] gi|163260742|emb|CAP43044.1| Predicted cytochrome 0 ubiquinol oxidase [Bordetella petrii] Length = 120 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 5/114 (4%) Query: 1 MKYDNI----HNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLC 56 M +D I H + ++GT K LVGF LS++LT+ FG+VM G M IVLC Sbjct: 1 MSHDTIAAADHGHDDAAHGTLKSYLVGFGLSILLTLASFGLVMSGAVPRSLAMPGIIVLC 60 Query: 57 AIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +AQ++V LV+FLHM ++ A +F + ++AI GS WV++++N NMM Sbjct: 61 -VAQLLVQLVYFLHMGASRSQRDNLSAFVFAVFVIAIIVGGSAWVLHNMNANMM 113 >gi|326389123|ref|ZP_08210703.1| cytochrome o ubiquinol oxidase subunit IV [Novosphingobium nitrogenifigens DSM 19370] gi|326206354|gb|EGD57191.1| cytochrome o ubiquinol oxidase subunit IV [Novosphingobium nitrogenifigens DSM 19370] Length = 104 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 47/101 (46%), Positives = 67/101 (66%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K GF+L++ILT+IPF +VM DK++ L I A Q+IVH+++FLHM+ K E Sbjct: 1 MKDYATGFVLAVILTVIPFYLVMTDALGDKSLTTLVIAGFAGVQVIVHMIYFLHMNAKSE 60 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117 GW+++A++FT I+V I G WVMYHLN+NMM M + Sbjct: 61 GGWNLLALVFTCILVFIVLSGVTWVMYHLNHNMMPMPHNMN 101 >gi|113867651|ref|YP_726140.1| bo3-type quinol oxidase, subunit IV [Ralstonia eutropha H16] gi|113526427|emb|CAJ92772.1| bo3-type quinol oxidase, subunit IV [Ralstonia eutropha H16] Length = 125 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 1/110 (0%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 ++H ++G+ + +G +LS+ LT+ F VM G +V +AQ++V Sbjct: 8 SVHADQPAAHGSVRSYTIGLLLSVALTMASFAAVMTGSL-STQAAIALVVGLCVAQLLVQ 66 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG 114 LV+FLH+ T + T ++ I GS+WVM++ + NMM + Sbjct: 67 LVYFLHLGTGPGQRGNTAIFACTGFLIVIVVAGSLWVMHNADINMMPTDM 116 >gi|300947920|ref|ZP_07162068.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 116-1] gi|300452520|gb|EFK16140.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 116-1] Length = 109 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + + + S+G+ K + GFILS+ILT+I F +VM G ++ TI+ A+ Q++V Sbjct: 2 SHSTDHSGASHGSVKTYMTGFILSIILTVISFWMVMTGAASP-AVILGTILAMAVVQVLV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107 >gi|260773172|ref|ZP_05882088.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio metschnikovii CIP 69.14] gi|260612311|gb|EEX37514.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio metschnikovii CIP 69.14] Length = 112 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M++ ++G+ K+ L+GF+ S++LT+IPF +VM + I++CA+AQ Sbjct: 1 MEHSYEQTHGGQAHGSVKEYLLGFLYSVLLTLIPFAMVMAD-IGSPTTKVVVILICAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+V LVFFLHM+T E W+++ +F++++VAI VGSMW+M HLN+NM+ Sbjct: 60 ILVQLVFFLHMNTSSEQAWNVITAVFSVVIVAIVLVGSMWIMQHLNHNML 109 >gi|293392553|ref|ZP_06636873.1| cytochrome o ubiquinol oxidase subunit IV [Serratia odorifera DSM 4582] gi|291424955|gb|EFE98164.1| cytochrome o ubiquinol oxidase subunit IV [Serratia odorifera DSM 4582] Length = 112 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 75/111 (67%), Gaps = 2/111 (1%) Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + + + S+ + K ++GFILS+ILT+IPF +VM G + +V A+ Sbjct: 1 MSHSSHETSHGGASHSSVKSYVIGFILSVILTVIPFSMVMSGTA-SHATILAVVVGMAVI 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q+IVHLV+FLHM+T E+ W+++A++FT +++ I VGS+W+MY+LN NMM Sbjct: 60 QVIVHLVYFLHMNTSSEERWNLVALLFTAMIIGIVVVGSLWIMYNLNINMM 110 >gi|295691073|ref|YP_003594766.1| cytochrome o ubiquinol oxidase subunit IV [Caulobacter segnis ATCC 21756] gi|295432976|gb|ADG12148.1| cytochrome o ubiquinol oxidase subunit IV [Caulobacter segnis ATCC 21756] Length = 129 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 40/110 (36%), Positives = 75/110 (68%), Gaps = 2/110 (1%) Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70 ++G+ K ++GF+L++ILT IPF +VM + + ++ A+ Q++VH+++FLH Sbjct: 19 GGAHGSLKDYVIGFVLAVILTAIPFWLVMGNVLPTAQMTAVAVMGLAVIQVLVHMIYFLH 78 Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 M+++ E GW+++A++FT+I+V I GS+WVM++LN +MM M+ + Sbjct: 79 MNSRSEGGWTLLALMFTLILVVITLSGSLWVMHNLNTHMMPTMAHDMQQM 128 >gi|167570631|ref|ZP_02363505.1| ubiquinol oxidase, subunit IV [Burkholderia oklahomensis C6786] Length = 110 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + H+ ++GT + GF+LS++LT FG+VM G + + + + A Q Sbjct: 1 MAHTH-HSHGDEAHGTVGGYIAGFMLSVLLTAASFGLVMGGVLPPREALVS-LAVLAGVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+T W++MA +T++ I G++WVM+++N NMMS Sbjct: 59 IVVHLVYFLHMNTSSSQRWNVMAFSYTVLTALILIFGTLWVMHNVNMNMMS 109 >gi|332532049|ref|ZP_08407932.1| cytochrome O ubiquinol oxidase, subunit IV [Pseudoalteromonas haloplanktis ANT/505] gi|332038390|gb|EGI74834.1| cytochrome O ubiquinol oxidase, subunit IV [Pseudoalteromonas haloplanktis ANT/505] Length = 118 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 9/118 (7%) Query: 1 MKYDNIH-------NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI 53 M + H + + S+G+ K L+GF+LS+ILT IPF +VM+G F K +I Sbjct: 1 MSHSETHALKQTQSDHHDESHGSVKTYLIGFVLSVILTAIPFYMVMEGDF-SKATTLWSI 59 Query: 54 VLCAIAQIIVHLVFFLHMSTKVE-DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 V AI QI VHL +FLH++ E S + +F+ +++ + S+W++Y N MM Sbjct: 60 VTLAIVQIWVHLKYFLHLNFTTEDGRASTFSFLFSALIIVMVVGLSVWIIYESNAMMM 117 >gi|300722000|ref|YP_003711280.1| cytochrome o ubiquinol oxidase subunit IV [Xenorhabdus nematophila ATCC 19061] gi|297628497|emb|CBJ89064.1| cytochrome o ubiquinol oxidase, subunit IV [Xenorhabdus nematophila ATCC 19061] Length = 110 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 47/110 (42%), Positives = 80/110 (72%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N + + S+G+ K ++GF+LS+ILT+IPF +VM+G I+ T++ A+ Q Sbjct: 1 MSHPNT-SHSGASHGSFKTYMIGFVLSVILTVIPFWMVMEGTASHSTILL-TVLAMAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VH ++FLHM+T E+ W+++A++FT++++ I VGS+W+MY+LN NMM Sbjct: 59 IVVHFIYFLHMNTSSEERWNLVALLFTLLVIVIVVVGSLWIMYNLNINMM 108 >gi|27375263|ref|NP_766792.1| cytochrome O ubiquinol oxidase subunit IV [Bradyrhizobium japonicum USDA 110] gi|27348399|dbj|BAC45417.1| cytochrome O ubiquinol oxidase subunit IV [Bradyrhizobium japonicum USDA 110] Length = 126 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 53/104 (50%), Positives = 74/104 (71%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74 T ++GF+LS++LT IPF +VM G K I L I+ A+ QI+VH+++FLHM+TK Sbjct: 22 STFSGYMLGFVLSVVLTAIPFWLVMSGTLPSKQITALVIMAFAVVQIVVHMIYFLHMNTK 81 Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118 E+GWS+MA+IFTI+MV I GS+WVM HLN+NMM + M + Sbjct: 82 SENGWSMMALIFTIVMVVIALSGSLWVMNHLNSNMMPIHQMSGM 125 >gi|186472798|ref|YP_001860140.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum STM815] gi|184195130|gb|ACC73094.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum STM815] Length = 114 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 ++G+ ++GF+LS+ILT FG+V+ G+ + I + QI+VHLV+ Sbjct: 11 AHADENHGSFGSYMIGFVLSVILTAAAFGVVLAGWATGTQALYA-IAGLGLVQIVVHLVY 69 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 FLHM+T W++ A FT++ I G++WVM++++ NMMS Sbjct: 70 FLHMNTSSGQRWNVTAFAFTVLTAVIVIGGTLWVMHNVSMNMMS 113 >gi|73538718|ref|YP_299085.1| cytochrome C oxidase subunit IV [Ralstonia eutropha JMP134] gi|72122055|gb|AAZ64241.1| Prokaryotic Cytochrome C oxidase subunit IV [Ralstonia eutropha JMP134] Length = 130 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 40/98 (40%), Positives = 67/98 (68%) Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73 + + + GF+LS+ILT IPF +VM F + + ++ QI+VH+++FLHM+ Sbjct: 29 HISMSGYVTGFVLSVILTTIPFWLVMGKVFEKSSTTAILLLALGAVQIVVHMIYFLHMNA 88 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 K E GW+++A++FT+++V I G++WVM+HLN+NMM Sbjct: 89 KSEGGWNMLALMFTLVLVVITLSGTLWVMFHLNSNMMP 126 >gi|73538403|ref|YP_298770.1| cytochrome O ubiquinol oxidase subunit IV [Ralstonia eutropha JMP134] gi|72121740|gb|AAZ63926.1| cyoD2, RSc1861; probable transmembrane cytochrome O ubiquinol oxidase (subunit Iv) oxidoreductase protein [Ralstonia eutropha JMP134] Length = 131 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%) Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS 72 S+G+ + +GF LSL+LT FG VM G + IV +AQ++V L FFLH+ Sbjct: 22 SHGSPRSYAIGFALSLVLTFASFGAVMSGALPP-GMGLPVIVGLCVAQLLVQLSFFLHLG 80 Query: 73 TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115 + T ++ I GS+WVM++ + NMM + Sbjct: 81 IGKGQRGNSGIFACTFGLIVIVIAGSLWVMHNADTNMMPTQMT 123 >gi|209518753|ref|ZP_03267568.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. H160] gi|209500795|gb|EEA00836.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. H160] Length = 113 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 1/110 (0%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 ++ + +G+ GF+LS+ILT+ F IVM G ++ + I A QI Sbjct: 4 SHNAHGAHSEGGHGSFGSYTAGFVLSVILTVAAFAIVMTGTLTGQSALFA-IAGLAFVQI 62 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +VHLVFFLHM+T W++ A FT + I G++WVM++++ NMMS Sbjct: 63 LVHLVFFLHMNTSSSQRWNVTAFAFTALTAVIVIGGTLWVMHNVSMNMMS 112 >gi|299067541|emb|CBJ38741.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia solanacearum CMR15] Length = 125 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 1/109 (0%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 +H +G+ + VG +LS+ LT+ F VM G + + + LC +AQ++V L Sbjct: 9 VHAGETAVHGSLRGYTVGLLLSVALTLAAFATVMTGALPARLALAGMVGLC-VAQLLVQL 67 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG 114 VFFLH+ + + T +++AI GS+WVM++ N NMM + Sbjct: 68 VFFLHLGPGPGQRGNTAIFVCTGLLIAIVVAGSLWVMHNANANMMPTDM 116 >gi|53719988|ref|YP_108974.1| putative cytochrome o ubiquinol oxidase protein [Burkholderia pseudomallei K96243] gi|53725262|ref|YP_102390.1| ubiquinol oxidase subunit IV [Burkholderia mallei ATCC 23344] gi|67641797|ref|ZP_00440564.1| ubiquinol oxidase, subunit IV [Burkholderia mallei GB8 horse 4] gi|76809313|ref|YP_334220.1| ubiquinol oxidase subunit IV [Burkholderia pseudomallei 1710b] gi|121598783|ref|YP_993720.1| ubiquinol oxidase, subunit IV [Burkholderia mallei SAVP1] gi|124385820|ref|YP_001028822.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10229] gi|126440812|ref|YP_001059741.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 668] gi|126450472|ref|YP_001081267.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10247] gi|126454810|ref|YP_001067026.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106a] gi|134277478|ref|ZP_01764193.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 305] gi|167001101|ref|ZP_02266902.1| ubiquinol oxidase, subunit IV [Burkholderia mallei PRL-20] gi|167720491|ref|ZP_02403727.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei DM98] gi|167744575|ref|ZP_02417349.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 14] gi|167816684|ref|ZP_02448364.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 91] gi|167846591|ref|ZP_02472099.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei B7210] gi|167895177|ref|ZP_02482579.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 7894] gi|167903561|ref|ZP_02490766.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei NCTC 13177] gi|167911809|ref|ZP_02498900.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 112] gi|167919811|ref|ZP_02506902.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei BCC215] gi|217420541|ref|ZP_03452046.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 576] gi|226199882|ref|ZP_03795432.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pakistan 9] gi|237813135|ref|YP_002897586.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia pseudomallei MSHR346] gi|242314110|ref|ZP_04813126.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106b] gi|254178120|ref|ZP_04884775.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 10399] gi|254184265|ref|ZP_04890855.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1655] gi|254191300|ref|ZP_04897804.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pasteur 52237] gi|254195702|ref|ZP_04902128.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei S13] gi|254199289|ref|ZP_04905655.1| ubiquinol oxidase, subunit IV [Burkholderia mallei FMH] gi|254205599|ref|ZP_04911951.1| ubiquinol oxidase, subunit IV [Burkholderia mallei JHU] gi|254258458|ref|ZP_04949512.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710a] gi|254296927|ref|ZP_04964380.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 406e] gi|254357761|ref|ZP_04974034.1| ubiquinol oxidase, subunit IV [Burkholderia mallei 2002721280] gi|52210402|emb|CAH36383.1| putative cytochrome o ubiquinol oxidase protein [Burkholderia pseudomallei K96243] gi|52428685|gb|AAU49278.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 23344] gi|76578766|gb|ABA48241.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710b] gi|121227593|gb|ABM50111.1| ubiquinol oxidase, subunit IV [Burkholderia mallei SAVP1] gi|124293840|gb|ABN03109.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10229] gi|126220305|gb|ABN83811.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 668] gi|126228452|gb|ABN91992.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106a] gi|126243342|gb|ABO06435.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10247] gi|134251128|gb|EBA51207.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 305] gi|147748885|gb|EDK55959.1| ubiquinol oxidase, subunit IV [Burkholderia mallei FMH] gi|147753042|gb|EDK60107.1| ubiquinol oxidase, subunit IV [Burkholderia mallei JHU] gi|148026888|gb|EDK84909.1| ubiquinol oxidase, subunit IV [Burkholderia mallei 2002721280] gi|157807091|gb|EDO84261.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 406e] gi|157938972|gb|EDO94642.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pasteur 52237] gi|160699159|gb|EDP89129.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 10399] gi|169652447|gb|EDS85140.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei S13] gi|184214796|gb|EDU11839.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1655] gi|217395953|gb|EEC35970.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 576] gi|225927938|gb|EEH23975.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pakistan 9] gi|237504955|gb|ACQ97273.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia pseudomallei MSHR346] gi|238522785|gb|EEP86227.1| ubiquinol oxidase, subunit IV [Burkholderia mallei GB8 horse 4] gi|242137349|gb|EES23751.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106b] gi|243063053|gb|EES45239.1| ubiquinol oxidase, subunit IV [Burkholderia mallei PRL-20] gi|254217147|gb|EET06531.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710a] Length = 110 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + ++GT + GF+LS++LT FG+VM G + + + + A Q Sbjct: 1 MAHSHP-SHGDEAHGTVGGYIAGFVLSVLLTAASFGLVMGGVLPPREALVS-LAVLAAVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+T W++MA +T++ I G++WVM+++ NMMS Sbjct: 59 IVVHLVYFLHMNTSSSQRWNVMAFSYTVLTALILIFGTVWVMHNVGMNMMS 109 >gi|83719004|ref|YP_442317.1| ubiquinol oxidase subunit IV [Burkholderia thailandensis E264] gi|167619297|ref|ZP_02387928.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis Bt4] gi|257138514|ref|ZP_05586776.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis E264] gi|83652829|gb|ABC36892.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis E264] Length = 110 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + ++GT + GF+LS++LT FG+VM G + + + + A Q Sbjct: 1 MAHSHP-THGDEAHGTVGGYIAGFVLSVLLTAASFGLVMGGVLPPREALVS-LAVLAAVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+T W++MA +T + I G++WVM++++ NMMS Sbjct: 59 IVVHLVYFLHMNTSSSQRWNVMAFSYTALTALILIFGTVWVMHNVSMNMMS 109 >gi|186470621|ref|YP_001861939.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum STM815] gi|184196930|gb|ACC74893.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum STM815] Length = 125 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 1/106 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + + S+G+ K ++G +LSL LT FG+VM + + +V + Q++V L + Sbjct: 11 HAHDASHGSVKHYVIGMLLSLALTFASFGVVMTHVV-PRAMGLTAVVALCVVQLLVQLRY 69 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113 FLH+ + + + + T +++AI GS+WV+++ N NMM + Sbjct: 70 FLHLGSSADQRSNTGIFVCTALLIAIIVAGSLWVIHNANVNMMPTQ 115 >gi|167581212|ref|ZP_02374086.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis TXDOH] Length = 108 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 ++GT + GF+LS++LT FG+VM G + + + + A QI+VHLV+ Sbjct: 5 THGDEAHGTVGGYIAGFVLSVLLTAASFGLVMGGVLPPREALVS-LAVLAAVQIVVHLVY 63 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 FLHM+T W++MA +T++ I G++WVM++++ NMMS Sbjct: 64 FLHMNTSSSQRWNVMAFSYTVLTALILIFGTVWVMHNVSMNMMS 107 >gi|312961436|ref|ZP_07775939.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens WH6] gi|311284331|gb|EFQ62909.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens WH6] Length = 112 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 70/110 (63%), Gaps = 1/110 (0%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 K +IH+ S+G+ + LVGF++S++LT+IPFG+ M + + +V QI Sbjct: 3 KQSSIHSSAGTSHGSSRSYLVGFVVSVLLTLIPFGLAMFPSL-PRTVTAWLVVALGAIQI 61 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +VHL FFLH+ T E W+++A+IF+ +++ + S+W+M +++NM++ Sbjct: 62 VVHLKFFLHLDTAQEQRWNLIALIFSAVIIVLLVGLSLWIMNSIHHNMLA 111 >gi|149926920|ref|ZP_01915179.1| Prokaryotic Cytochrome C oxidase subunit IV [Limnobacter sp. MED105] gi|149824472|gb|EDM83690.1| Prokaryotic Cytochrome C oxidase subunit IV [Limnobacter sp. MED105] Length = 133 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 47/96 (48%), Positives = 69/96 (71%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + + +GF+L++ILT+IPF +VM G F L I+ Q++VH+++FLHM++K Sbjct: 24 SMRDYTIGFVLAVILTVIPFALVMGGVFESSTTTALVILGLGAVQMVVHMIYFLHMNSKS 83 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 E GWS++AM+FT+I+V I VGS+WVMYHLN NMM Sbjct: 84 EGGWSMLAMMFTLIIVVITLVGSIWVMYHLNTNMMP 119 >gi|229592521|ref|YP_002874640.1| cytochrome C oxidase (ubiquinol oxidase) subunit IV [Pseudomonas fluorescens SBW25] gi|229364387|emb|CAY52169.1| cytochrome C oxidase (ubiquinol oxidase) subunit IV [Pseudomonas fluorescens SBW25] Length = 113 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 70/110 (63%), Gaps = 1/110 (0%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 + + H+ + S+G+ K +GFILS+ILT+IPFG+VM K+I + ++ A+ Q+ Sbjct: 4 AHSHDHDSHDASHGSVKSYAIGFILSVILTLIPFGLVMYPTL-PKSITLMIVLAFAVIQV 62 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +VHLV+FLH+ E +++A +F +++ + S+W+M+ ++ MM+ Sbjct: 63 LVHLVYFLHLDRSKEQRDNVIAFVFAGLVILLLVGLSIWIMFSIHTFMMA 112 >gi|242240301|ref|YP_002988482.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii Ech703] gi|242132358|gb|ACS86660.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii Ech703] Length = 110 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 82/110 (74%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H+ + S+G+ K L+GF+LS+ILT+IPF +VM G +I+ LT++ CA+ Q Sbjct: 1 MSHS-AHDHSGASHGSVKSYLMGFVLSIILTVIPFSMVMNGTTAH-SIILLTVLGCAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLH++T E+ W+++A++FT++++AI VGS+W+M ++NMM Sbjct: 59 ILVHLVYFLHLNTASEERWNVVAIVFTVLIIAIVVVGSIWIMMSAHHNMM 108 >gi|134095867|ref|YP_001100942.1| cytochrome o ubiquinol oxidase subunit IV [Herminiimonas arsenicoxydans] gi|133739770|emb|CAL62821.1| Cytochrome o ubiquinol oxidase protein CyoD (Ubiquinol oxidase chain D) [Herminiimonas arsenicoxydans] Length = 136 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 49/96 (51%), Positives = 67/96 (69%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K +GFILS+ILT IPF +VM D L I+ A QI+VH+++FLHM+TK Sbjct: 24 SLKSYAIGFILSVILTAIPFWMVMNDVLKDSGTTGLVILGFAAVQIVVHMIYFLHMNTKS 83 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 E GWS++A+IFT+++V I GS+WVMYH+N NMM Sbjct: 84 EGGWSMLALIFTVVIVVIVLAGSLWVMYHMNTNMMP 119 >gi|150376510|ref|YP_001313106.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium medicae WSM419] gi|150031057|gb|ABR63173.1| Cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium medicae WSM419] Length = 133 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 51/105 (48%), Positives = 72/105 (68%), Gaps = 2/105 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K + GFILS++LT IPF +VM + I+ QI+VH++FFLHM+T+ Sbjct: 28 TLKSYVTGFILSVLLTAIPFWLVMADVLESAILTAAIIMALGAIQIVVHMIFFLHMNTRS 87 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118 E GW++MA+IFTI++VAI GS+WVM+HLN NMM M E M+++ Sbjct: 88 EGGWTMMALIFTIVLVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132 >gi|33593868|ref|NP_881512.1| cytochrome 0 ubiquinol oxidase [Bordetella pertussis Tohama I] gi|33600272|ref|NP_887832.1| cytochrome 0 ubiquinol oxidase [Bordetella bronchiseptica RB50] gi|33563941|emb|CAE43202.1| cytochrome 0 ubiquinol oxidase [Bordetella pertussis Tohama I] gi|33567870|emb|CAE31784.1| cytochrome 0 ubiquinol oxidase [Bordetella bronchiseptica RB50] gi|332383287|gb|AEE68134.1| cytochrome 0 ubiquinol oxidase [Bordetella pertussis CS] Length = 115 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Query: 1 MKYD-NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + + +G+ K L+GF +SL+LT FG+VM G + I +V+ +A Sbjct: 1 MSHAVTSEDHGHADHGSLKSYLIGFAISLVLTFGSFGLVMAGTV-PRGIALAGVVVLCVA 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q++V LVFFLHM + ++ +FTI+++AI GS+WV++++N NMM Sbjct: 60 QLLVQLVFFLHMGGSKKQRDNVTTFVFTILIIAIIVGGSVWVLHNMNANMM 110 >gi|170723534|ref|YP_001751222.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida W619] gi|169761537|gb|ACA74853.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida W619] Length = 110 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 40/108 (37%), Positives = 69/108 (63%), Gaps = 2/108 (1%) Query: 5 NIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 N H+ + ++G+ K ++GF+LS+ILT IPFG+VM KN+ L +V A+ Q++V Sbjct: 3 NAHDTHHEGNHGSVKSYMIGFVLSIILTAIPFGLVMYPSL-PKNLTVLIVVAMAVIQVVV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLHM E ++ +FT +++A+ S+W+M+ ++ MM+ Sbjct: 62 HLVYFLHMDRSKEQRSNVSTFLFTTMVIALLVGLSLWIMFSIHYEMMA 109 >gi|307545742|ref|YP_003898221.1| cytochrome O ubiquinol oxidase cyoD [Halomonas elongata DSM 2581] gi|307217766|emb|CBV43036.1| K02300 cytochrome o ubiquinol oxidase operon protein cyoD [Halomonas elongata DSM 2581] Length = 109 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 47/103 (45%), Positives = 73/103 (70%), Gaps = 1/103 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + HS+G+ K +VG ILS++LTIIPFG+VM G F L IV A+AQ++V L+ Sbjct: 6 SHEEHSHGSVKSYVVGLILSIVLTIIPFGVVMTGSF-GTPATVLIIVATAVAQVLVQLIL 64 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 F+HM+TK ++GW+ M+ +FT+ ++ + GS+W+MY+L+ NMM Sbjct: 65 FMHMNTKADEGWNFMSFVFTVSILVLIIGGSVWIMYNLHQNMM 107 >gi|294012087|ref|YP_003545547.1| cytochrome o ubiquinol oxidase operon protein cyoD [Sphingobium japonicum UT26S] gi|292675417|dbj|BAI96935.1| cytochrome o ubiquinol oxidase operon protein cyoD [Sphingobium japonicum UT26S] Length = 139 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%) Query: 3 YDNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 + + H + +G+ ++GF LS ILT IPF +VM G D + + I+ A Q+ Sbjct: 6 HSHDHGHHEEGAHGSFGSYMIGFGLSAILTAIPFWLVMSGALNDPQLTGVVIMGFAAVQV 65 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117 +VH+++FLHM+T+VE GWS MAM+ T+++V I GS+WVMYHLN NMM M Sbjct: 66 VVHMIYFLHMNTRVEGGWSFMAMMLTVVLVVIVLSGSLWVMYHLNANMMPHAQMEM 121 >gi|258541197|ref|YP_003186630.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus IFO 3283-01] gi|256632275|dbj|BAH98250.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus IFO 3283-01] gi|256635332|dbj|BAI01301.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus IFO 3283-03] gi|256638387|dbj|BAI04349.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus IFO 3283-07] gi|256641441|dbj|BAI07396.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus IFO 3283-22] gi|256644496|dbj|BAI10444.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus IFO 3283-26] gi|256647551|dbj|BAI13492.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus IFO 3283-32] gi|256650604|dbj|BAI16538.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653595|dbj|BAI19522.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus IFO 3283-12] Length = 137 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + + S+G+ ++GF+L+++LT++ FG+VM + + A+ Q++VHL + Sbjct: 34 SSSGESHGSVSSYIIGFVLAVVLTVLSFGVVMSHSLSPAGTLAA-VSALALVQVLVHLHY 92 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 FLHM E W+ M +FT+ VAI VGS+++M + +MMS Sbjct: 93 FLHMGGDSEQRWNNMCFVFTVAFVAILIVGSVFIMNNTALHMMS 136 >gi|282891622|ref|ZP_06300111.1| hypothetical protein pah_c186o006 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498485|gb|EFB40815.1| hypothetical protein pah_c186o006 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 120 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 ++H++ +GT K +GFI S+ILT+I F + + + T+V A+ Q ++ Sbjct: 6 SLHDIQREWHGTLKSYAIGFIGSIILTVISFFMTSAKILSGR-FLAYTLVGLALIQAVIQ 64 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 L +FLH+ + + W + F +++ I +GS+W+MY LN+ +MS M H Sbjct: 65 LRYFLHLGQETKPRWETIIFYFMFLVLLIIALGSLWIMYDLNDRVMSDIAMGMSH 119 >gi|148253544|ref|YP_001238129.1| cytochrome o ubiquinol oxidase subunit IV [Bradyrhizobium sp. BTAi1] gi|146405717|gb|ABQ34223.1| cytochrome bo3 quinol oxidase subunit 4 [Bradyrhizobium sp. BTAi1] Length = 121 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 54/116 (46%), Positives = 75/116 (64%), Gaps = 1/116 (0%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 + + H+ GT++ L+GF S++LT IPF +VM G DK L I+ A Q+ Sbjct: 5 AHAHAHDSADAHAGTRQGQLIGFGASVVLTAIPFLLVMHGTL-DKQATALIIMAFAAVQV 63 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117 +VH++FFLHM+TK E GW++MA+IFTIIMV I GS+WVM+HL NMM + M Sbjct: 64 VVHMIFFLHMNTKAEGGWTMMALIFTIIMVVIALSGSLWVMHHLTTNMMPVHEMGQ 119 >gi|194367564|ref|YP_002030174.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas maltophilia R551-3] gi|194350368|gb|ACF53491.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas maltophilia R551-3] Length = 110 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 69/110 (62%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + +++G+ K L+GF+L +LT++PF +VM + + +V A+AQ Sbjct: 1 MAHVET-SRAGNAHGSTKSYLIGFVLCALLTVVPFALVMNPVL-SRPLTLFLLVGFAVAQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+V LV+FLHM K E GW++ + +FT++++ I S+W+++ ++ +MM Sbjct: 59 ILVQLVYFLHMDRKSEGGWNLASFVFTLVILFIVVALSVWIIWSMHYHMM 108 >gi|285017726|ref|YP_003375437.1| cytochrome o ubiquinol oxidase subunit iv transmembrane protein [Xanthomonas albilineans GPE PC73] gi|283472944|emb|CBA15449.1| probable cytochrome o ubiquinol oxidase subunit iv transmembrane protein [Xanthomonas albilineans] Length = 112 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 43/109 (39%), Positives = 70/109 (64%), Gaps = 2/109 (1%) Query: 3 YDNIHNMNMHSYGT-KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 + + S+G+ K L+GF+L++ILT+IPFG+VM G F K + I + A Q+ Sbjct: 4 HPSSEAHADPSHGSSLKSYLIGFVLAVILTVIPFGMVMSGAF-PKGATVIAIAVMAAVQM 62 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +VHLV+FLHM E ++ +F+++++ I VGS+WV+++LN NMM Sbjct: 63 LVHLVYFLHMDRSPEQRSNVHVGLFSLLIIGIVVVGSLWVLHNLNVNMM 111 >gi|190576212|ref|YP_001974057.1| putative cytochrome O ubiquinol oxidase subunit IV [Stenotrophomonas maltophilia K279a] gi|190014134|emb|CAQ47773.1| putative cytochrome O ubiquinol oxidase subunit IV [Stenotrophomonas maltophilia K279a] Length = 110 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 70/110 (63%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + +++G+ K L+GF+L +LT++PF +VM L + + +V A+AQ Sbjct: 1 MAHVET-SRAGNAHGSTKSYLIGFVLCALLTVVPFALVMN-PLLSRPLTLFLLVGFAVAQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+V LV+FLHM K E GW++ + +FT++++ I S+W+++ ++ +MM Sbjct: 59 ILVQLVYFLHMDRKSEGGWNLASFVFTLVILFIIVALSVWIIWSMHYHMM 108 >gi|33595747|ref|NP_883390.1| cytochrome 0 ubiquinol oxidase [Bordetella parapertussis 12822] gi|33565826|emb|CAE36371.1| cytochrome 0 ubiquinol oxidase [Bordetella parapertussis] Length = 115 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%) Query: 1 MKYD-NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + + ++G+ K L+GF +SL+LT FG+VM G ++I +V+ +A Sbjct: 1 MSHAVTSEDHGHANHGSLKSYLIGFAISLVLTFGSFGLVMAGTV-PRSIALAGVVVLCVA 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q++V LVFFLHM + ++ +FTI+++AI GS+WV++++N NMM Sbjct: 60 QLLVQLVFFLHMGGSKKQRDNVTTFVFTILIIAIIVGGSVWVLHNMNANMM 110 >gi|295699447|ref|YP_003607340.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. CCGE1002] gi|295438660|gb|ADG17829.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. CCGE1002] Length = 113 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 + + +G+ + GF+LS+ILT+ F IVM G + + I A+ QI Sbjct: 4 SHSAHGAHSEGGHGSFGSYMTGFVLSVILTVAAFAIVMTGTLTGHSALFA-IAGLAVVQI 62 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +VHLVFFLHM+ W++ A +FT + I G++WVM++++ NMMS Sbjct: 63 LVHLVFFLHMNASSSQRWNVTAFVFTALTAVIVVGGTLWVMHNVSMNMMS 112 >gi|296156344|ref|ZP_06839183.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. Ch1-1] gi|295893850|gb|EFG73629.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. Ch1-1] Length = 110 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 2/109 (1%) Query: 4 DNIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 D+ HN S+G+ VGFILS++LT+ FG+VM G ++ + I A+ QI+ Sbjct: 2 DHSHNAHAGESHGSLGSYTVGFILSVVLTVAAFGLVMTGKLTGEHALFA-IAGLALVQIV 60 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 VHLVFFLHM+T E W++MA FT++ I G++WVM++++ +MMS Sbjct: 61 VHLVFFLHMNTSSEQRWNVMAFAFTLLTAIIVIGGTLWVMHNVSMHMMS 109 >gi|85058642|ref|YP_454344.1| cytochrome o ubiquinol oxidase subunit IV [Sodalis glossinidius str. 'morsitans'] gi|84779162|dbj|BAE73939.1| cytochrome o ubiquinol oxidase subunit IV [Sodalis glossinidius str. 'morsitans'] Length = 110 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 80/110 (72%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + S G+ K L+GFILS+ILT+IPF IVM+G ++++ +V+CA+ Q Sbjct: 1 MSHASA-GHTGASQGSHKSYLIGFILSIILTVIPFAIVMQGSA-SESMLIAVLVICAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLH+ST E W+++A +F ++++AI VGS+W+M++LN+N+M Sbjct: 59 IVVHLVYFLHLSTSSEQQWNLIAFVFAVMIIAILVVGSLWIMWYLNHNLM 108 >gi|299065536|emb|CBJ36707.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia solanacearum CMR15] Length = 121 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 43/106 (40%), Positives = 71/106 (66%), Gaps = 1/106 (0%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + H + T K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VH Sbjct: 15 HGHATGGAGHATVKGYLIGFVLAVILTVIPFKMVMGGGFSHDTVLV-TVMGLAVVQIVVH 73 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 L++FLH+ W++MA +FT++++ I VGS+WVM+++N NMM Sbjct: 74 LIYFLHLDGSSAQRWNVMAFLFTLLILLIVIVGSLWVMHNMNVNMM 119 >gi|34499448|ref|NP_903663.1| cytochrome o ubiquinol oxidase subunit IV [Chromobacterium violaceum ATCC 12472] gi|34105300|gb|AAQ61655.1| cytochrome o ubiquinol oxidase subunit IV [Chromobacterium violaceum ATCC 12472] Length = 106 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 1/105 (0%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H + S+GT K +VGF+LS+ILT IPF +VM G F K + I+ A+ QI+V L Sbjct: 2 SHAHDNASHGTVKSYMVGFVLSVILTAIPFWMVMGGAFT-KQATLIGILAMAVVQIVVQL 60 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +FLH+ E + + +FT +++ + V S+W++Y + MM Sbjct: 61 KYFLHLDFSKEGKLNTFSFLFTGMVIVLLVVLSIWIIYTADALMM 105 >gi|92113085|ref|YP_573013.1| cytochrome C oxidase subunit IV [Chromohalobacter salexigens DSM 3043] gi|91796175|gb|ABE58314.1| cytochrome bo3 quinol oxidase subunit 4 [Chromohalobacter salexigens DSM 3043] Length = 111 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 43/107 (40%), Positives = 71/107 (66%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 D + + ++G+ K ++G ILS++LTIIPFG+VM G F + +TI + AI Q++V Sbjct: 3 DAHTSHDGGNHGSVKSYVIGLILSIVLTIIPFGMVMSGGFE-TMTVVVTISIMAILQVLV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 L+ F+H+ K E+GW+ + IFT +++ I GS+W+M +L+ NMM Sbjct: 62 QLIMFMHLDFKTEEGWNAGSFIFTALILVILVGGSLWIMQNLHANMM 108 >gi|259909263|ref|YP_002649619.1| Cytochrome o ubiquinol oxidase protein CyoD [Erwinia pyrifoliae Ep1/96] gi|224964885|emb|CAX56407.1| Cytochrome o ubiquinol oxidase protein CyoD [Erwinia pyrifoliae Ep1/96] gi|283479315|emb|CAY75231.1| Cytochrome o ubiquinol oxidase protein cyoD [Erwinia pyrifoliae DSM 12163] gi|310766834|gb|ADP11784.1| Cytochrome o ubiquinol oxidase protein CyoD [Erwinia sp. Ejp617] Length = 109 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + + S+G+ K ++GFILS+ILT IPF +VM G K + +++CA+ Q++V Sbjct: 2 SHPATEHGASHGSVKSYMIGFILSIILTGIPFWMVMDGGA-SKATILTVVLVCAVVQVLV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLH+ +K E GW+++A++F +++ I VGS+W+M++LN NMMS Sbjct: 61 HLVYFLHLDSKSEGGWNLIAIVFAALIILIVVVGSLWIMWNLNYNMMS 108 >gi|187930227|ref|YP_001900714.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12J] gi|241664394|ref|YP_002982754.1| cytochrome O ubiquinol oxidase subunit IV [Ralstonia pickettii 12D] gi|309782937|ref|ZP_07677657.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia sp. 5_7_47FAA] gi|187727117|gb|ACD28282.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12J] gi|240866421|gb|ACS64082.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12D] gi|308918361|gb|EFP64038.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia sp. 5_7_47FAA] Length = 122 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 71/97 (73%), Gaps = 1/97 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K L+GF+L++ILT IPF +VM G + + ++ T++ A+ QI+VHL++FLH+ Sbjct: 27 TVKGYLIGFVLAVILTAIPFKMVMDGGYSHQTVLV-TVMALAVVQIVVHLIYFLHLDGSS 85 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112 W++MA +FT++++AI VGS+WVM+++N NMM+M Sbjct: 86 AQRWNVMAFLFTLLILAIVVVGSLWVMHNMNANMMTM 122 >gi|91778473|ref|YP_553681.1| CyoD [Burkholderia xenovorans LB400] gi|91691133|gb|ABE34331.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia xenovorans LB400] Length = 110 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 2/109 (1%) Query: 4 DNIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 D+ HN S+G+ GF+LS+ILT+ FG+VM G ++ + I A QI+ Sbjct: 2 DHSHNAHAGESHGSIGSYTAGFVLSVILTVAAFGLVMTGKLTGEHALFA-IAGLAFVQIV 60 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 VHLVFFLHM+T E W++MA FT++ I G++WVM++++ +MMS Sbjct: 61 VHLVFFLHMNTSSEQRWNVMAFAFTLLTAIIVIGGTLWVMHNVSMHMMS 109 >gi|188534643|ref|YP_001908440.1| Cytochrome o ubiquinol oxidase protein cyoD (Ubiquinol oxidase chain D) [Erwinia tasmaniensis Et1/99] gi|292487459|ref|YP_003530331.1| cytochrome o ubiquinol oxidase protein cyoD [Erwinia amylovora CFBP1430] gi|292898701|ref|YP_003538070.1| cytochrome O ubiquinol oxidase subunit IV [Erwinia amylovora ATCC 49946] gi|188029685|emb|CAO97564.1| Cytochrome o ubiquinol oxidase protein cyoD (Ubiquinol oxidase chain D) [Erwinia tasmaniensis Et1/99] gi|291198549|emb|CBJ45657.1| cytochrome O ubiquinol oxidase subunit IV [Erwinia amylovora ATCC 49946] gi|291552878|emb|CBA19923.1| Cytochrome o ubiquinol oxidase protein cyoD [Erwinia amylovora CFBP1430] gi|312171563|emb|CBX79821.1| Cytochrome o ubiquinol oxidase protein cyoD [Erwinia amylovora ATCC BAA-2158] Length = 109 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + + S+G+ K ++GFILS+ILT IPF +VM G K + +++CA+ Q++V Sbjct: 2 SHPATEHGASHGSVKSYMIGFILSIILTGIPFWMVMDGGA-SKATILAVVLVCAVVQVLV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLH+ +K E GW+++A++F +++ I VGS+W+M++LN NMMS Sbjct: 61 HLVYFLHLDSKSEGGWNLIAIVFAALIILIVVVGSLWIMWNLNYNMMS 108 >gi|190573374|ref|YP_001971219.1| putative transmembrane quinol oxidase subunit 4 [Stenotrophomonas maltophilia K279a] gi|254523523|ref|ZP_05135578.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas sp. SKA14] gi|30351180|gb|AAP22951.1| cytochrome oxidase subunit IV [Rhizobium arachis] gi|190011296|emb|CAQ44909.1| putative transmembrane quinol oxidase subunit 4 [Stenotrophomonas maltophilia K279a] gi|219721114|gb|EED39639.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas sp. SKA14] Length = 113 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 43/108 (39%), Positives = 73/108 (67%), Gaps = 1/108 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H S+GT K L+GF+L+++LT+IPF +VM G F + + + I + A+ Q++ Sbjct: 6 HAHDHGTGGESHGTVKSYLIGFVLAVVLTVIPFWMVMSGDF-SRTVNGVVIAITAVLQML 64 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 VHLVFFLH+ E W++ A FT++++ I VG++WVM+++N +MM Sbjct: 65 VHLVFFLHLDRSSESRWNVNAAAFTVVVIGIIVVGTLWVMHNMNVHMM 112 >gi|119387827|ref|YP_918861.1| cytochrome C oxidase subunit IV [Paracoccus denitrificans PD1222] gi|461330|emb|CAA55035.1| cytochrome ba(3) [Paracoccus denitrificans] gi|119378402|gb|ABL73165.1| cytochrome ba3 quinol oxidase subunit 4 [Paracoccus denitrificans PD1222] Length = 127 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 46/104 (44%), Positives = 72/104 (69%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + + GF+LS+ILT IPFG+VM G F + + +T++ A+ QI+VH+V+FLHM+ K Sbjct: 20 SHASYIKGFLLSVILTAIPFGLVMAGGFESRALTAVTVIGFAVVQILVHMVYFLHMNGKQ 79 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 E+GW++++ IFT+++V I GS+WVMYH+N NMM + Sbjct: 80 EEGWTMLSTIFTVVVVVILLAGSLWVMYHMNTNMMPQMDHELMQ 123 >gi|8134389|sp|Q9WWR4|CYOD_PSEPU RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD; AltName: Full=Cytochrome o ubiquinol oxidase subunit IV gi|4586340|dbj|BAA76359.1| cytochrome o ubiquinol oxidase D [Pseudomonas putida] Length = 110 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Query: 5 NIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 N H+ + ++G+ K ++GFILS+ILT IPFG+ M KN+ L IV A+ Q++V Sbjct: 3 NAHDTHHEGNHGSVKSYMIGFILSIILTAIPFGLAMSPSL-PKNLTVLIIVAMAVIQVVV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLHM E ++ +FT +++A+ S+W+M+ ++ M++ Sbjct: 62 HLVYFLHMDRSKEQRNNVWTFLFTTLVIALLVGLSLWIMFSIHFEMLA 109 >gi|152968964|ref|YP_001334073.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576416|ref|YP_002240092.1| cytochrome o ubiquinol oxidase, subunit IV [Klebsiella pneumoniae 342] gi|238893376|ref|YP_002918110.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella pneumoniae NTUH-K2044] gi|262042465|ref|ZP_06015624.1| cytochrome o ubiquinol oxidase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288936842|ref|YP_003440901.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella variicola At-22] gi|330011525|ref|ZP_08307111.1| cytochrome o ubiquinol oxidase, subunit IV [Klebsiella sp. MS 92-3] gi|150953813|gb|ABR75843.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565474|gb|ACI07250.1| cytochrome o ubiquinol oxidase, subunit IV [Klebsiella pneumoniae 342] gi|238545692|dbj|BAH62043.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040169|gb|EEW41281.1| cytochrome o ubiquinol oxidase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288891551|gb|ADC59869.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella variicola At-22] gi|328534142|gb|EGF60777.1| cytochrome o ubiquinol oxidase, subunit IV [Klebsiella sp. MS 92-3] Length = 109 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 52/110 (47%), Positives = 80/110 (72%), Gaps = 3/110 (2%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI++ A+ Q Sbjct: 1 MSHSTDH--SGASHGSVKSYMTGFILSIILTVIPFAMVMSGSA-SHAVILGTILVTAVVQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHLV+FLHM++K ++GW++ A IFT+I++AI VGS+W+M++LN NMM Sbjct: 58 IVVHLVYFLHMNSKSDEGWNLTAFIFTVIIIAIVVVGSIWIMWNLNYNMM 107 >gi|70732058|ref|YP_261814.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas fluorescens Pf-5] gi|68346357|gb|AAY93963.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens Pf-5] Length = 112 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 36/98 (36%), Positives = 65/98 (66%), Gaps = 1/98 (1%) Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73 +G+++ LVGF LSL+LT+IPF +VM +N+ +V + QI+VHL +FLH+ T Sbjct: 15 HGSRRSYLVGFALSLVLTLIPFALVMYPSL-PRNVTLWAVVGLGMIQILVHLRYFLHLDT 73 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 E W++ A+IF+ +++ + S+W+M +++NM++ Sbjct: 74 ATEQRWNLTALIFSAVVIFLLVGLSLWIMNSIHHNMLA 111 >gi|194364921|ref|YP_002027531.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas maltophilia R551-3] gi|194347725|gb|ACF50848.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas maltophilia R551-3] Length = 113 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 42/108 (38%), Positives = 73/108 (67%), Gaps = 1/108 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H S+G+ K L+GF+L+++LT+IPF +VM G F + + + I + A+ Q++ Sbjct: 6 HAHDHAAGGESHGSVKSYLIGFVLAVVLTVIPFWMVMSGDF-SRTVNGVVIAITAVLQML 64 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 VHLVFFLH+ E W++ A FT++++ I VG++WVM+++N +MM Sbjct: 65 VHLVFFLHLDRSSESRWNVNAAAFTVVVIGIIVVGTLWVMHNMNVHMM 112 >gi|301058564|ref|ZP_07199569.1| cytochrome o ubiquinol oxidase, subunit IV [delta proteobacterium NaphS2] gi|300447296|gb|EFK11056.1| cytochrome o ubiquinol oxidase, subunit IV [delta proteobacterium NaphS2] Length = 109 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 37/103 (35%), Positives = 65/103 (63%), Gaps = 1/103 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + + G+ + + GF+LS++LT+IPF +VM G ++++ I I QI +HL + Sbjct: 7 DSSGAGRGSLRTYISGFVLSVVLTVIPFALVMGGGV-PRSVVIWGICGAGIVQIFIHLHY 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 FLH+ T W++MA++FT++++ I G++WVM LN+ MM Sbjct: 66 FLHLDTSSAARWNVMALVFTLLIIFIFVGGTVWVMVTLNSRMM 108 >gi|161524385|ref|YP_001579397.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia multivorans ATCC 17616] gi|189350860|ref|YP_001946488.1| cytochrome o ubiquinol oxidase protein [Burkholderia multivorans ATCC 17616] gi|221198370|ref|ZP_03571416.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD2M] gi|221208953|ref|ZP_03581950.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD2] gi|221215750|ref|ZP_03588710.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD1] gi|160341814|gb|ABX14900.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia multivorans ATCC 17616] gi|189334882|dbj|BAG43952.1| cytochrome o ubiquinol oxidase protein [Burkholderia multivorans ATCC 17616] gi|221164362|gb|EED96848.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD1] gi|221171236|gb|EEE03686.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD2] gi|221182302|gb|EEE14703.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD2M] Length = 110 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + +G+ + GFILS++LT FG+VM G + + + A Q Sbjct: 1 MAHSHS-SQLEEGHGSVGSYVAGFILSVLLTAASFGLVMGGVLSPHASLVA-LAVLAFVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109 >gi|262396851|ref|YP_003288704.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio sp. Ex25] gi|262340445|gb|ACY54239.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio sp. Ex25] Length = 103 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M+ H + + GFI SLILT+IPF V D + CA+ QI VH +F Sbjct: 1 MDQHVETSASDYVKGFIASLILTVIPFYFVWTKSLPD-TTTYAILFGCALVQIFVHFKYF 59 Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM TK + W++++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMETKTSDGRWNLVSLMFTAIVVLILIAGSVWIIYNMNVNM 101 >gi|77361151|ref|YP_340726.1| cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D) [Pseudoalteromonas haloplanktis TAC125] gi|76876062|emb|CAI87284.1| cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D) [Pseudoalteromonas haloplanktis TAC125] Length = 119 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 10/119 (8%) Query: 1 MKYDNIHN--------MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLT 52 M + H + S+G+ K L+GF+LS+ILT IPF +VM G F K + Sbjct: 1 MSHSETHALKQMQNEHHHDESHGSVKSYLIGFVLSVILTAIPFYMVMSGDF-SKATTLYS 59 Query: 53 IVLCAIAQIIVHLVFFLHMSTKVE-DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+ A+ QI VHL +FLH++ E S + +F+ +++ + S+W++Y N MM Sbjct: 60 IITLAVVQIWVHLKYFLHLNFITEDGRASTFSFLFSALIIVMVVGLSVWIIYESNAMMM 118 >gi|315125955|ref|YP_004067958.1| cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D) [Pseudoalteromonas sp. SM9913] gi|315014469|gb|ADT67807.1| cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D) [Pseudoalteromonas sp. SM9913] Length = 118 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 9/118 (7%) Query: 1 MKYDNIHN-------MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI 53 M + H + S+G+ K L+GF+LS+ILT IPF +VM+G F K +I Sbjct: 1 MSHSETHALAQMQSQHHDQSHGSVKTYLIGFVLSVILTAIPFWMVMEGDF-SKVTTLWSI 59 Query: 54 VLCAIAQIIVHLVFFLHMSTKV-EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 V AI QI VHL +FLH++ E + +F+ +++ + S+W++Y N MM Sbjct: 60 VTFAIVQIWVHLKYFLHLNFTTDEGKANTFTFLFSALIIVMVVGLSVWIIYESNAMMM 117 >gi|107028752|ref|YP_625847.1| cytochrome C oxidase subunit IV [Burkholderia cenocepacia AU 1054] gi|116690089|ref|YP_835712.1| cytochrome C oxidase subunit IV [Burkholderia cenocepacia HI2424] gi|170733423|ref|YP_001765370.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia cenocepacia MC0-3] gi|206560505|ref|YP_002231269.1| cytochrome O ubiquinol oxidase protein [Burkholderia cenocepacia J2315] gi|254247836|ref|ZP_04941157.1| Heme/copper-type cytochrome/quinol oxidase [Burkholderia cenocepacia PC184] gi|105897916|gb|ABF80874.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia cenocepacia AU 1054] gi|116648178|gb|ABK08819.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia cenocepacia HI2424] gi|124872612|gb|EAY64328.1| Heme/copper-type cytochrome/quinol oxidase [Burkholderia cenocepacia PC184] gi|169816665|gb|ACA91248.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia cenocepacia MC0-3] gi|198036546|emb|CAR52443.1| cytochrome O ubiquinol oxidase protein [Burkholderia cenocepacia J2315] Length = 110 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + +G+ + GFILS++LT FG+VM G + + + A Q Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVLLTAASFGLVMGGVLSPHASLIG-LAVLAFVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAIVIVGTLWVMHNVSMNMMS 109 >gi|91225752|ref|ZP_01260781.1| hypothetical protein V12G01_07168 [Vibrio alginolyticus 12G01] gi|91189641|gb|EAS75916.1| hypothetical protein V12G01_07168 [Vibrio alginolyticus 12G01] Length = 103 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M+ H + + GFI SLILT+IPF V D + CA+ QI VH +F Sbjct: 1 MDQHVETSSSDYVKGFIASLILTVIPFYFVWTKSLPD-TTTYAILFGCALVQIFVHFKYF 59 Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM TK + W++++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMETKTSDGRWNLVSLMFTAIVVLILIAGSVWIIYNMNVNM 101 >gi|325522318|gb|EGD00930.1| ubiquinol oxidase, subunit IV [Burkholderia sp. TJI49] Length = 110 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + +G+ + GFILS++LT FG+VM G + + + A Q Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVLLTAASFGLVMGGVLSPHASLVA-LAVLAFVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109 >gi|291616541|ref|YP_003519283.1| CyoD [Pantoea ananatis LMG 20103] gi|291151571|gb|ADD76155.1| CyoD [Pantoea ananatis LMG 20103] gi|327392972|dbj|BAK10394.1| cytochrome o ubiquinol oxidase protein CyoD [Pantoea ananatis AJ13355] Length = 109 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 45/108 (41%), Positives = 74/108 (68%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + N + S+G+ K ++GFILS+ILT IPF +VM G I+ + +V + ++V Sbjct: 2 SHSVNEHGASHGSVKSYMIGFILSIILTGIPFWMVMDGSASHGTILGVVLVCAVVQ-VLV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLH+ +K E GW+++A++F+ I++ I VGS+W+M++LN NMM Sbjct: 61 HLVYFLHLDSKSEGGWNMVAIVFSAIIILIVVVGSLWIMWNLNYNMMP 108 >gi|254428964|ref|ZP_05042671.1| cytochrome o ubiquinol oxidase subunit IV [Alcanivorax sp. DG881] gi|196195133|gb|EDX90092.1| cytochrome o ubiquinol oxidase subunit IV [Alcanivorax sp. DG881] Length = 118 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 44/96 (45%), Positives = 66/96 (68%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K+ GF+L++ILT+IPF +VM + I+ A+ QI+VH+VFFLHM+ Sbjct: 19 SLKEYATGFVLAVILTVIPFWLVMGDVLESSTTTVMVILGFALVQIVVHMVFFLHMNFHS 78 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 E GW+++A+IFT+I+V I GS+WVM++LN NMM Sbjct: 79 EGGWNMLALIFTLILVFITLAGSLWVMHNLNVNMMP 114 >gi|78066842|ref|YP_369611.1| cytochrome C oxidase subunit IV [Burkholderia sp. 383] gi|77967587|gb|ABB08967.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia sp. 383] Length = 110 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + +G+ + GFILS++LT FG+VM G + + + A Q Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVLLTAASFGLVMGGVLSPHASLIA-LAVLAFVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109 >gi|46446826|ref|YP_008191.1| putative cytochrome O ubiquinol oxidase chain IV cyoD [Candidatus Protochlamydia amoebophila UWE25] gi|46400467|emb|CAF23916.1| putative cytochrome O ubiquinol oxidase chain IV cyoD [Candidatus Protochlamydia amoebophila UWE25] Length = 120 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 2/120 (1%) Query: 1 MKYD-NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M ++ N+ ++ +GT K ++GF SLILT++ F V ++++ I A+ Sbjct: 1 MCHELNLDDVKKEWHGTIKSYVIGFTASLILTLLSFSFVFFKILKGQDLVYTLI-GFALT 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 Q V LVFFLH+ + + W +A+ FTI+++ I +GS+W+M+ LN MM H Sbjct: 60 QTFVQLVFFLHIGQEPKPRWESIALGFTILILLIVVIGSLWIMHDLNERMMGYMTQEMTH 119 >gi|221067298|ref|ZP_03543403.1| cytochrome o ubiquinol oxidase subunit IV [Comamonas testosteroni KF-1] gi|220712321|gb|EED67689.1| cytochrome o ubiquinol oxidase subunit IV [Comamonas testosteroni KF-1] Length = 141 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 43/103 (41%), Positives = 67/103 (65%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + GFIL++ILT IPF +VM D+ + L A+ Q++VH+V+FLHM+ K+ Sbjct: 22 TMGDYVKGFILAVILTAIPFYLVMNNVITDRTTAVAVLGLFAVIQVLVHMVYFLHMNGKI 81 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118 + GW++++ IFT+I +AI G++WVM+H+N NMM M Sbjct: 82 QGGWTMLSTIFTVIFLAIAISGTLWVMFHMNTNMMPGHEMHQA 124 >gi|254524619|ref|ZP_05136674.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas sp. SKA14] gi|219722210|gb|EED40735.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas sp. SKA14] Length = 110 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 68/110 (61%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + +++G+ L+GF+L +LT++PF +VM + + +V A+AQ Sbjct: 1 MAHVET-SRAGNAHGSTTSYLIGFVLCALLTVVPFALVMNPVL-SRPLTLFLLVGFAVAQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+V LV+FLHM K E GW++ + +FT++++ I S+W+++ ++ +MM Sbjct: 59 ILVQLVYFLHMDRKSEGGWNLASFVFTLVILFIVVALSVWIIWSMHYHMM 108 >gi|104780180|ref|YP_606678.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas entomophila L48] gi|95109167|emb|CAK13864.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas entomophila L48] Length = 110 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 67/104 (64%), Gaps = 1/104 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + ++G+ K ++GF+LS+ILT IPFG+VM KN+ L +V A+ Q++VHLV+ Sbjct: 7 THHEGNHGSVKSYMIGFVLSIILTAIPFGLVMFPSL-PKNLTVLVVVAMAVIQVVVHLVY 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 FLHM E ++ +FT++++A+ S+W+M+ ++ M++ Sbjct: 66 FLHMDRSKEQRSNVSTFLFTVLVIALLVGLSLWIMFSIHFEMLA 109 >gi|92118914|ref|YP_578643.1| cytochrome C oxidase subunit IV [Nitrobacter hamburgensis X14] gi|91801808|gb|ABE64183.1| cytochrome bo3 quinol oxidase subunit 4 [Nitrobacter hamburgensis X14] Length = 113 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K L+G +L+L LT IPFG+V + I + AIAQ++VHL +FLH+ K Sbjct: 20 TIKSYLIGVVLALALTAIPFGLVAAHTLPPIQ-TFVIIGVAAIAQVVVHLRYFLHLDFKP 78 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 ++A+ F +++ I G++W+M+ M Sbjct: 79 SSQNKLVALCFAAVVLLILVGGTLWIMFDRYYRM 112 >gi|222111442|ref|YP_002553706.1| cytochrome o ubiquinol oxidase subunit Iv [Acidovorax ebreus TPSY] gi|221730886|gb|ACM33706.1| cytochrome o ubiquinol oxidase subunit IV [Acidovorax ebreus TPSY] Length = 139 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 41/103 (39%), Positives = 70/103 (67%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 TK + GFIL++ILT+IPF +VM ++ L + + A+ Q++VH+V+FLHM+ K+ Sbjct: 23 TKGDYVKGFILAVILTVIPFWLVMADVIQNRTTAVLVLGIFAMVQVVVHMVYFLHMNGKI 82 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118 + GW++++ IFTI+ +A+ +G++WVM+H+N NMM Sbjct: 83 QGGWTMLSTIFTIVFLAVTIIGTLWVMFHMNANMMPAHANPMA 125 >gi|26987551|ref|NP_742976.1| cytochrome o ubiquinol oxidase, protein CyoD [Pseudomonas putida KT2440] gi|148546082|ref|YP_001266184.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida F1] gi|325275995|ref|ZP_08141820.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas sp. TJI-51] gi|24982224|gb|AAN66440.1|AE016273_9 cytochrome o ubiquinol oxidase, protein CyoD [Pseudomonas putida KT2440] gi|18149144|dbj|BAB83596.1| cytochrome o oxidase D [Pseudomonas putida] gi|42795026|gb|AAS45859.1| CyoD [Pseudomonas putida] gi|148510140|gb|ABQ77000.1| Cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida F1] gi|313497178|gb|ADR58544.1| CyoD [Pseudomonas putida BIRD-1] gi|324098876|gb|EGB96897.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas sp. TJI-51] Length = 110 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Query: 5 NIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 N H+ + ++G+ K ++GF+LS+ILT IPFG+ M KN+ L IV A+ Q++V Sbjct: 3 NAHDTHHEGNHGSVKSYMIGFVLSIILTAIPFGLAMTASL-PKNLTVLIIVAMAVIQVVV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLHM E ++ +FT +++A+ S+W+M+ ++ M++ Sbjct: 62 HLVYFLHMDRSKEQRNNVSTFLFTTLVIALLVGLSLWIMFSIHFEMLA 109 >gi|317047167|ref|YP_004114815.1| cytochrome o ubiquinol oxidase subunit IV [Pantoea sp. At-9b] gi|316948784|gb|ADU68259.1| cytochrome o ubiquinol oxidase subunit IV [Pantoea sp. At-9b] Length = 109 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 45/107 (42%), Positives = 75/107 (70%), Gaps = 1/107 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + + S+G+ K ++GFILS+ILT IPF +VM G K + +++CA+ Q++V Sbjct: 2 SHSATEHGASHGSVKSYMIGFILSIILTAIPFWMVMDGSA-SKGTILAVVLVCAVVQVLV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HLV+FLH+ +K E GW+++A++F +++ I VGS+W+M++LN NMM Sbjct: 61 HLVYFLHLDSKSEGGWNMVAIVFAAVIILIVVVGSLWIMWNLNYNMM 107 >gi|83747511|ref|ZP_00944549.1| CyoD [Ralstonia solanacearum UW551] gi|83725825|gb|EAP72965.1| CyoD [Ralstonia solanacearum UW551] Length = 122 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 69/95 (72%), Gaps = 1/95 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VHL++FLH+ Sbjct: 27 SVKGYLIGFVLAVILTVIPFKMVMGGGFSHDTVLV-TVMALAVVQIVVHLIYFLHLDGSS 85 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 W++MA +FT++++AI VGS+WVM+++N NMM Sbjct: 86 AQRWNVMAFLFTLLILAIVIVGSLWVMHNMNINMM 120 >gi|264678283|ref|YP_003278190.1| cytochrome C oxidase subunit IV [Comamonas testosteroni CNB-2] gi|299532079|ref|ZP_07045473.1| cytochrome C oxidase subunit IV [Comamonas testosteroni S44] gi|262208796|gb|ACY32894.1| cytochrome C oxidase subunit IV [Comamonas testosteroni CNB-2] gi|298719741|gb|EFI60704.1| cytochrome C oxidase subunit IV [Comamonas testosteroni S44] Length = 141 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 44/103 (42%), Positives = 67/103 (65%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + GFIL++ILT IPF +VM D+ + L A+ Q+IVH+V+FLHM+ K+ Sbjct: 22 TMGDYVKGFILAVILTAIPFYLVMNNIITDRTTAVAVLGLFAVIQVIVHMVYFLHMNGKI 81 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118 + GW++++ IFT+I +AI G++WVM+H+N NMM M Sbjct: 82 QGGWTMLSTIFTVIFLAIAISGTLWVMFHMNTNMMPGHEMHQA 124 >gi|283850557|ref|ZP_06367845.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio sp. FW1012B] gi|283574128|gb|EFC22100.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio sp. FW1012B] Length = 107 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 1/99 (1%) Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70 G+ + VGF+LS++LT+IPF +VM G + AI QI+V L +FLH Sbjct: 10 AAGTGSVRSYTVGFVLSVVLTVIPFALVMSGALSPSA-TVFCVFAAAIVQIVVQLHYFLH 68 Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 + T W++++++FT++++ + GS+WVMY L+ M Sbjct: 69 LDTSSGMHWNLLSLVFTVLIMTLFIGGSIWVMYSLHYRM 107 >gi|123443352|ref|YP_001007326.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090313|emb|CAL13179.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 95 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 48/94 (51%), Positives = 68/94 (72%), Gaps = 1/94 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K L+GFILS+ILT+IPF +VM G + T+V A+ QIIVHLV+FLHM+ E Sbjct: 1 MKSYLIGFILSVILTVIPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGSSE 59 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + W+++A +FT +++AI VGS+W+MY+LN NMM Sbjct: 60 ERWNLVAFLFTAMIIAIVVVGSLWIMYNLNINMM 93 >gi|121595099|ref|YP_986995.1| cytochrome C oxidase subunit IV [Acidovorax sp. JS42] gi|120607179|gb|ABM42919.1| cytochrome bo3 quinol oxidase subunit 4 [Acidovorax sp. JS42] Length = 142 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 41/105 (39%), Positives = 72/105 (68%) Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73 + TK + GFIL++ILT+IPF +VM +++ L + + A+ Q++VH+V+FLHM+ Sbjct: 24 HVTKGDYVKGFILAVILTVIPFALVMGDVIQNRSTAVLVLGIFAMVQVVVHMVYFLHMNG 83 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118 K++ GW++++ IFTI+ +A+ +G++WVM+H+N NMM Sbjct: 84 KIQGGWTMLSTIFTIVFLAVTIIGTLWVMFHMNANMMPAHANPMA 128 >gi|300702890|ref|YP_003744491.1| cytochrome o ubiquinol oxidase, subunit iv [Ralstonia solanacearum CFBP2957] gi|299070552|emb|CBJ41847.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia solanacearum CFBP2957] Length = 122 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 43/95 (45%), Positives = 69/95 (72%), Gaps = 1/95 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VHL++FLH+ Sbjct: 27 TVKGYLIGFVLAVILTVIPFKMVMGGGFSHDTVLV-TVMALAVVQIVVHLIYFLHLDGSS 85 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 W++MA +FT++++AI VGS+WVM+++N NMM Sbjct: 86 AQRWNVMAFLFTLLILAIVIVGSLWVMHNMNINMM 120 >gi|167589186|ref|ZP_02381574.1| Cytochrome C oxidase subunit IV [Burkholderia ubonensis Bu] Length = 110 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + +G+ + GFILS++LT FG+V+ G + + + A+ Q Sbjct: 1 MAHSHS-SQLEEGHGSVGGYIAGFILSVLLTAASFGLVLGGVQSPHASLIA-LAVLALVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM++ W++MA +T++ AI VG++WVM++++ NMMS Sbjct: 59 IVVHLVYFLHMNSSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109 >gi|239995160|ref|ZP_04715684.1| cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D) [Alteromonas macleodii ATCC 27126] gi|332143297|ref|YP_004429035.1| cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D) [Alteromonas macleodii str. 'Deep ecotype'] gi|327553319|gb|AEB00038.1| cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D) [Alteromonas macleodii str. 'Deep ecotype'] Length = 123 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 2/109 (1%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + + + ++G K ++GFILS++LT IPF +VM G K ++V + QI Sbjct: 15 HASSTHNSDDAHGDVKSYIIGFILSVVLTAIPFTLVMNGDL-SKVTTIWSVVTLGLVQIW 73 Query: 63 VHLVFFLHMST-KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 VHL +FLH++ E + + +F+ +++ + S+W++Y N MM Sbjct: 74 VHLKYFLHLNFVTEEGRANTFSFLFSALIIFMVVGLSVWIIYESNAMMM 122 >gi|332992078|gb|AEF02133.1| cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D) [Alteromonas sp. SN2] Length = 130 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 2/102 (1%) Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69 + +G+ K L+GF+LS+ILT+IPF +VM+G F K +IV+ A+ QI VHL +FL Sbjct: 29 HAAEHGSVKTYLIGFVLSVILTLIPFVMVMEGDF-SKVTTLWSIVVFALVQIWVHLKYFL 87 Query: 70 HMSTKVE-DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 H++ E S ++ +F+ +++ + S+W++Y N MM Sbjct: 88 HLNFVTEDGRASTISFLFSALIIFMVVGLSIWIIYESNAMMM 129 >gi|296115138|ref|ZP_06833779.1| cytochrome o ubiquinol oxidase subunit IV [Gluconacetobacter hansenii ATCC 23769] gi|295978239|gb|EFG84976.1| cytochrome o ubiquinol oxidase subunit IV [Gluconacetobacter hansenii ATCC 23769] Length = 110 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 D + S+G+ L GF++S++LT FG+VM F M I L A+ QI+V Sbjct: 3 DAHTSSAGESHGSVGSYLTGFVISVLLTAAAFGLVMAHTFSPSGTMGA-ITLLAVVQIVV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HL+FFLHM+ E W+IMA FT++ V I G++++M+ + NMMS Sbjct: 62 HLIFFLHMNGSSEQRWNIMAFAFTVVTVLILVGGTIFIMHDTSINMMS 109 >gi|66044395|ref|YP_234236.1| cytochrome C oxidase subunit IV [Pseudomonas syringae pv. syringae B728a] gi|63255102|gb|AAY36198.1| Prokaryotic Cytochrome C oxidase subunit IV [Pseudomonas syringae pv. syringae B728a] gi|330969178|gb|EGH69244.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. aceris str. M302273PT] Length = 110 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 ++ H+ +S+G+ K ++GF+LS+ILT IPF +VM K++ +++ AI QI+V Sbjct: 3 NSHHSAEDNSHGSVKSYVIGFVLSIILTAIPFALVMSPSL-PKDMTIAIVLVFAIIQILV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HL +FLH+ ++MA FT +++ + S+W+++ ++ MM+ Sbjct: 62 HLHYFLHLDFTSVQRNNVMAFAFTTMVIVLLVGLSLWIIFSVHREMMA 109 >gi|238750997|ref|ZP_04612493.1| hypothetical protein yrohd0001_1290 [Yersinia rohdei ATCC 43380] gi|238765442|ref|ZP_04626363.1| hypothetical protein ykris0001_44090 [Yersinia kristensenii ATCC 33638] gi|238696336|gb|EEP89132.1| hypothetical protein ykris0001_44090 [Yersinia kristensenii ATCC 33638] gi|238710687|gb|EEQ02909.1| hypothetical protein yrohd0001_1290 [Yersinia rohdei ATCC 43380] Length = 95 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 47/94 (50%), Positives = 68/94 (72%), Gaps = 1/94 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++GFILS+ILT+IPF +VM G + T+V A+ QIIVHLV+FLHM+ E Sbjct: 1 MKSYIIGFILSVILTVIPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGSSE 59 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + W+++A +FT +++AI VGS+W+MY+LN NMM Sbjct: 60 ERWNLVAFLFTAMIIAIVVVGSLWIMYNLNINMM 93 >gi|71733637|ref|YP_273479.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. phaseolicola 1448A] gi|237799927|ref|ZP_04588388.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. oryzae str. 1_6] gi|257487314|ref|ZP_05641355.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623938|ref|ZP_06456892.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646772|ref|ZP_06478115.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. aesculi str. 2250] gi|289678123|ref|ZP_06499013.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. syringae FF5] gi|298485880|ref|ZP_07003956.1| Cytochrome O ubiquinol oxidase subunit IV [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302186053|ref|ZP_07262726.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. syringae 642] gi|71554190|gb|AAZ33401.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159569|gb|EFI00614.1| Cytochrome O ubiquinol oxidase subunit IV [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323022|gb|EFW79112.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. glycinea str. B076] gi|320329855|gb|EFW85843.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. glycinea str. race 4] gi|330870268|gb|EGH04977.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330874428|gb|EGH08577.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. glycinea str. race 4] gi|330890459|gb|EGH23120.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. mori str. 301020] gi|330895789|gb|EGH28078.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. japonica str. M301072PT] gi|330939016|gb|EGH42488.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. pisi str. 1704B] gi|330975784|gb|EGH75850.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330988098|gb|EGH86201.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009080|gb|EGH89136.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331022782|gb|EGI02839.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. oryzae str. 1_6] Length = 110 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 ++ H+ +S+G+ K ++GF+LS+ILT IPF +VM K++ +++ AI QI+V Sbjct: 3 NSHHSAEDNSHGSVKSYIIGFVLSIILTAIPFALVMSPSL-PKDMTIAIVLVFAIIQILV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HL +FLH+ ++MA FT +++ + S+W+++ ++ MM+ Sbjct: 62 HLHYFLHLDFTSVQRNNVMAFAFTTMVIVLLVGLSLWIIFSVHREMMA 109 >gi|167031867|ref|YP_001667098.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida GB-1] gi|166858355|gb|ABY96762.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida GB-1] Length = 110 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Query: 5 NIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 N H+ + ++G+ K ++GF+LS+ILT IPFG+ M KN+ L IV A+ Q++V Sbjct: 3 NAHDTHHEGNHGSVKSYMIGFVLSIILTAIPFGLAMTASL-PKNLTVLIIVAMAVIQVVV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLHM E ++ +FT +++A+ S+W+M+ ++ M++ Sbjct: 62 HLVYFLHMDRSKEQRNNVSTFLFTTMVIALLVGLSLWIMFSIHFEMLA 109 >gi|297620726|ref|YP_003708863.1| putative cytochrome o ubiquinol oxidase, subunit IV [Waddlia chondrophila WSU 86-1044] gi|297376027|gb|ADI37857.1| putative cytochrome o ubiquinol oxidase, subunit IV [Waddlia chondrophila WSU 86-1044] Length = 121 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%) Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS 72 +GT +GF +SL+ T I F +V F + + TI A Q +V L+FFLH+ Sbjct: 14 WHGTYLSYGIGFFVSLVFTSISFLLVAYDAFPPVS-LIYTIATLAFLQAVVQLIFFLHLG 72 Query: 73 TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 + + W F ++++ I VGS+WVM LN MM M + H Sbjct: 73 QEGKPHWETFIFFFMLLILLIIVVGSLWVMNDLNERMMPKHNMTAAH 119 >gi|207721795|ref|YP_002252233.1| transmembrane cytochrome o ubiquinol oxidase (subunit iv) protein [Ralstonia solanacearum MolK2] gi|206586959|emb|CAQ17543.1| transmembrane cytochrome o ubiquinol oxidase (subunit iv) protein [Ralstonia solanacearum MolK2] Length = 123 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 69/95 (72%), Gaps = 1/95 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VHL++FLH+ Sbjct: 28 SVKGYLIGFVLAVILTVIPFKMVMSGGFSHDTVLV-TVMALAVVQIVVHLIYFLHLDGSS 86 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 W++MA +FT++++AI VGS+WVM+++N NMM Sbjct: 87 AQRWNVMAFLFTLLILAIVIVGSLWVMHNMNINMM 121 >gi|117922465|ref|YP_871657.1| cytochrome C oxidase subunit IV [Shewanella sp. ANA-3] gi|117614797|gb|ABK50251.1| cytochrome C oxidase subunit IV [Shewanella sp. ANA-3] Length = 113 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 2/109 (1%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 +D+ H + + + K LVGF+LS++LT IPF VM F + + IV A+ QI Sbjct: 7 SHDHSHGADDLA-ASIKSYLVGFVLSVVLTAIPFWAVMTHHFEQSTTLAIVIVT-ALVQI 64 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +VHL +FLH+ E + + +FT +++ + S+W++ N MM Sbjct: 65 LVHLKYFLHLDFSKEGKINTFSFLFTALIIVMVVGLSVWIILEANALMM 113 >gi|90409892|ref|ZP_01217909.1| hypothetical protein P3TCK_03976 [Photobacterium profundum 3TCK] gi|90329245|gb|EAS45502.1| hypothetical protein P3TCK_03976 [Photobacterium profundum 3TCK] Length = 103 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 N H+ + GFI SL+LTIIPF L + + + CAI Q++VHLV+F Sbjct: 2 SNQHAQSSMNGYTKGFIGSLVLTIIPFYFAATK-MLPHAVTLVILFACAIVQVVVHLVYF 60 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 LHM + W++++++FT I+V I GS+W+M++LN+NMM Sbjct: 61 LHMDRSEKGQWNLLSLVFTGIVVFILIAGSLWIMWNLNHNMM 102 >gi|187919715|ref|YP_001888746.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phytofirmans PsJN] gi|187718153|gb|ACD19376.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phytofirmans PsJN] Length = 110 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 2/109 (1%) Query: 4 DNIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 D+ HN S+G+ GFILS++LT+ FG+VM G +N + L + QI+ Sbjct: 2 DHSHNAHAGESHGSIGSYTTGFILSVVLTVAAFGLVMTGTLTGENALLAIAGLA-LVQIV 60 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 VHL+FFLH++T E W++MA FT++ I G++WVM++++ +MMS Sbjct: 61 VHLIFFLHLNTSSEQRWNVMAFAFTLLTAVIVIGGTLWVMHNVSMHMMS 109 >gi|170745536|ref|YP_001766993.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium radiotolerans JCM 2831] gi|170659137|gb|ACB28191.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium radiotolerans JCM 2831] Length = 182 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 1/96 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + L+G L+ +LT+ F +V F + IV AIAQ+ VHLVFFLH++T Sbjct: 65 GIRGYLIGLALATLLTVCSFAVVHAKFVWAPAVPVAVIV-FAIAQMGVHLVFFLHITTGP 123 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 ++ ++MA+ F ++ V + GS+W+M ++N+NMM Sbjct: 124 DNINNVMALAFGVLFVVLLIGGSVWIMSNMNSNMMP 159 >gi|260778346|ref|ZP_05887239.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio coralliilyticus ATCC BAA-450] gi|260606359|gb|EEX32644.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio coralliilyticus ATCC BAA-450] Length = 103 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M+ H + GF+ SLILT+IPF V D + + CA+ QI VH +F Sbjct: 1 MDQHLETGASDYVKGFVASLILTVIPFYFVWTQSLPD-TTTYVLLFGCALVQIFVHFKYF 59 Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM K + W++++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMEVKTSDGRWNLVSLMFTAIVVLILIAGSVWIIYNMNVNM 101 >gi|212634274|ref|YP_002310799.1| Quinol oxidase subunit V [Shewanella piezotolerans WP3] gi|212555758|gb|ACJ28212.1| Quinol oxidase subunit V [Shewanella piezotolerans WP3] Length = 111 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K LVGF+LS++LT IPF VM F K + ++ A+ QI+VHL +FLH+ E Sbjct: 19 VKSYLVGFMLSVVLTAIPFWAVMSHHFE-KPLTIALVLGSAVVQIVVHLKYFLHLDFSKE 77 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + + +FT +++ + S+W++Y N MM Sbjct: 78 GKLNTFSFLFTALIIVMVVGLSVWIIYAANALMM 111 >gi|49474943|ref|YP_032984.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella henselae str. Houston-1] gi|49237748|emb|CAF26940.1| Cytochrome o ubiquinol oxidase subunit IV [Bartonella henselae str. Houston-1] Length = 228 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 8/110 (7%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQ 60 ++ HN + LVGFIL++ T+ F VM G I + + AI Q Sbjct: 4 HNETHNPSTS------SYLVGFILAVFFTLGSFIPVMYGMMDSWAISTKVVYLIGMAIIQ 57 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 IIV ++FFLH+++ + W++ A+ F I V + G+ W + HLN NMM Sbjct: 58 IIVQIIFFLHLNSGPDAKWNLSALWFAAICVFVIIGGTWWAISHLNYNMM 107 >gi|217422660|ref|ZP_03454163.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 576] gi|217394891|gb|EEC34910.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 576] Length = 107 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + + ++GT L GFILS++LT FG+V+ G + + + A QI+VHLV+ Sbjct: 4 SHDGEAHGTVGGYLAGFILSVLLTAASFGLVLSGALSSHASLIA-LAVLAFVQIVVHLVY 62 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 FLHM+ W++MA +T++ AI VG++WVM+++ NMMS Sbjct: 63 FLHMNGSSSQRWNVMAFSYTVLTAAILIVGTLWVMHNVGMNMMS 106 >gi|53716518|ref|YP_105024.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 23344] gi|53722915|ref|YP_111900.1| cytochrome O ubiquinol oxidase protein [Burkholderia pseudomallei K96243] gi|67641747|ref|ZP_00440515.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei GB8 horse 4] gi|76817781|ref|YP_336148.1| ubiquinol oxidase subunit IV [Burkholderia pseudomallei 1710b] gi|121597003|ref|YP_990968.1| ubiquinol oxidase, subunit IV [Burkholderia mallei SAVP1] gi|124382029|ref|YP_001025369.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10229] gi|126445034|ref|YP_001063705.1| ubiquinol oxidase subunit IV [Burkholderia pseudomallei 668] gi|126446731|ref|YP_001077433.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10247] gi|126456685|ref|YP_001076599.1| ubiquinol oxidase subunit IV [Burkholderia pseudomallei 1106a] gi|134278624|ref|ZP_01765338.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 305] gi|226195663|ref|ZP_03791250.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pakistan 9] gi|237510118|ref|ZP_04522833.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia pseudomallei MSHR346] gi|242313191|ref|ZP_04812208.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106b] gi|251767252|ref|ZP_04820032.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei PRL-20] gi|254177413|ref|ZP_04884069.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 10399] gi|254184768|ref|ZP_04891357.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1655] gi|254185987|ref|ZP_04892505.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pasteur 52237] gi|254193750|ref|ZP_04900182.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei S13] gi|254202956|ref|ZP_04909318.1| ubiquinol oxidase, subunit IV [Burkholderia mallei FMH] gi|254208290|ref|ZP_04914639.1| ubiquinol oxidase, subunit IV [Burkholderia mallei JHU] gi|254263772|ref|ZP_04954637.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710a] gi|254301043|ref|ZP_04968487.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 406e] gi|52213329|emb|CAH39372.1| cytochrome O ubiquinol oxidase protein [Burkholderia pseudomallei K96243] gi|52422488|gb|AAU46058.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 23344] gi|76582254|gb|ABA51728.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710b] gi|121224801|gb|ABM48332.1| ubiquinol oxidase, subunit IV [Burkholderia mallei SAVP1] gi|126224525|gb|ABN88030.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 668] gi|126230453|gb|ABN93866.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106a] gi|126239585|gb|ABO02697.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10247] gi|134250408|gb|EBA50488.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 305] gi|147746001|gb|EDK53079.1| ubiquinol oxidase, subunit IV [Burkholderia mallei FMH] gi|147750977|gb|EDK58045.1| ubiquinol oxidase, subunit IV [Burkholderia mallei JHU] gi|157811393|gb|EDO88563.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 406e] gi|157933673|gb|EDO89343.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pasteur 52237] gi|160698453|gb|EDP88423.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 10399] gi|169650501|gb|EDS83194.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei S13] gi|184215360|gb|EDU12341.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1655] gi|225932148|gb|EEH28148.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pakistan 9] gi|235002323|gb|EEP51747.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia pseudomallei MSHR346] gi|238522722|gb|EEP86165.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei GB8 horse 4] gi|242136430|gb|EES22833.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106b] gi|243063388|gb|EES45574.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei PRL-20] gi|254214774|gb|EET04159.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710a] gi|261826610|gb|ABM99196.2| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10229] Length = 110 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + + ++GT L GFILS++LT FG+V+ G + + + A QI+VHLV+ Sbjct: 7 SHDGEAHGTVGGYLAGFILSVLLTAASFGLVLSGALSSHASLIA-LAVLAFVQIVVHLVY 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 FLHM+ W++MA +T++ AI VG++WVM+++ NMMS Sbjct: 66 FLHMNGSSSQRWNVMAFSYTVLTAAILIVGTLWVMHNVGMNMMS 109 >gi|83718186|ref|YP_438682.1| ubiquinol oxidase subunit IV [Burkholderia thailandensis E264] gi|257141752|ref|ZP_05590014.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis E264] gi|83652011|gb|ABC36075.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis E264] Length = 110 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + + ++GT + GFILS++LT FG+V+ G + + + A QI+VHLV+ Sbjct: 7 SHDGEAHGTVGGYVAGFILSVLLTAASFGLVLSGALSSHASLIA-LAVLAFVQIVVHLVY 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 FLHM+ W++MA +T++ AI VG++WVM+++ NMMS Sbjct: 66 FLHMNGSSSQRWNVMAFSYTVLTAAILIVGTLWVMHNVGMNMMS 109 >gi|269964141|ref|ZP_06178438.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831096|gb|EEZ85258.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 103 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M H + GFI SLILT+IPF V D + CAI QI VH +F Sbjct: 1 MEQHLDTGASDYVKGFIASLILTVIPFYCVWAQVLPD-TATYAVLFGCAIVQIFVHFKYF 59 Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM K E W++++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMEVKTSEGQWNVVSLMFTAIVVLILIAGSIWIIYNMNVNM 101 >gi|71897568|ref|ZP_00679813.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa Ann-1] gi|71732471|gb|EAO34524.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa Ann-1] Length = 113 Score = 100 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 4/113 (3%) Query: 1 MKYDNIHNMNMHSYGT---KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCA 57 M + H+ + K L+GF+L++ILT IPF IVM F K + A Sbjct: 1 MSHHPHHSSEPTAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSF-SKETTVALVSALA 59 Query: 58 IAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q++VHLV+FLHM E ++ +F+++++ I VGS+WVM++LN +MM Sbjct: 60 AVQMLVHLVYFLHMDRSEEQRSNVHVALFSLLVIGIVIVGSLWVMHNLNIHMM 112 >gi|28198530|ref|NP_778844.1| cytochrome O ubiquinol oxidase subunit IV [Xylella fastidiosa Temecula1] gi|182681209|ref|YP_001829369.1| cytochrome o ubiquinol oxidase subunit IV [Xylella fastidiosa M23] gi|28056614|gb|AAO28493.1| cytochrome O ubiquinol oxidase subunit IV [Xylella fastidiosa Temecula1] gi|182631319|gb|ACB92095.1| cytochrome o ubiquinol oxidase subunit IV [Xylella fastidiosa M23] gi|307579655|gb|ADN63624.1| cytochrome O ubiquinol oxidase subunit IV [Xylella fastidiosa subsp. fastidiosa GB514] Length = 113 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 4/113 (3%) Query: 1 MKYDNIHNMNMHSYGT---KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCA 57 M + H+ + K L+GF+L++ILT IPF IVM F K + A Sbjct: 1 MSHHPHHSSEPTAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSF-SKETTVALVSALA 59 Query: 58 IAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q++VHLV+FLHM E ++ +F+++++ I VGS+WVM++LN +MM Sbjct: 60 AVQMLVHLVYFLHMDRSKEQRSNVHVALFSLLVIGIVIVGSLWVMHNLNIHMM 112 >gi|307293187|ref|ZP_07573033.1| cytochrome o ubiquinol oxidase subunit IV [Sphingobium chlorophenolicum L-1] gi|306881253|gb|EFN12469.1| cytochrome o ubiquinol oxidase subunit IV [Sphingobium chlorophenolicum L-1] Length = 133 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 49/105 (46%), Positives = 72/105 (68%) Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70 ++G+ + ++GF LS+ILT IPF +VM G D + + I+ A Q++VH+++FLH Sbjct: 17 EGAHGSLRSNMIGFGLSVILTAIPFWLVMSGVLGDPQLTGVIIMGFAAVQVVVHMIYFLH 76 Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115 M+T+VE GWS MAM+ T+++V I GS+WVMYHLN NMM M Sbjct: 77 MNTRVEGGWSFMAMMLTVVLVVIVLSGSLWVMYHLNANMMPHADM 121 >gi|15837988|ref|NP_298676.1| cytochrome O ubiquinol oxidase, subunit IV [Xylella fastidiosa 9a5c] gi|9106395|gb|AAF84196.1|AE003970_3 cytochrome O ubiquinol oxidase, subunit IV [Xylella fastidiosa 9a5c] Length = 113 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 4/113 (3%) Query: 1 MKYDNIHNMNMHSYGT---KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCA 57 M + H+ + K L+GF+L++ILT IPF IVM F K + A Sbjct: 1 MSHHPHHSSEPAAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSF-SKETSVALVSALA 59 Query: 58 IAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q++VHLV+FLHM E ++ +F+++++ I VGS+WVM++LN +MM Sbjct: 60 AVQMLVHLVYFLHMDRSKEQRSNVHVALFSLLVIGIVIVGSLWVMHNLNIHMM 112 >gi|28868536|ref|NP_791155.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. tomato str. DC3000] gi|213968330|ref|ZP_03396474.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas syringae pv. tomato T1] gi|301383462|ref|ZP_07231880.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. tomato Max13] gi|302060281|ref|ZP_07251822.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. tomato K40] gi|302129918|ref|ZP_07255908.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851774|gb|AAO54850.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas syringae pv. tomato str. DC3000] gi|213926968|gb|EEB60519.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas syringae pv. tomato T1] gi|330873013|gb|EGH07162.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330957415|gb|EGH57675.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. maculicola str. ES4326] gi|330963121|gb|EGH63381.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015175|gb|EGH95231.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 110 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 36/108 (33%), Positives = 68/108 (62%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 ++ H+ +S+G+ K ++GF+LS+ILT IPF +VM L K++ +++ AI QI+V Sbjct: 3 NSHHSAEDNSHGSVKSYIIGFVLSVILTAIPFALVMS-PMLPKDMTIAIVLVFAIIQILV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HL +FLH+ ++MA FT +++ + S+W+++ ++ MM+ Sbjct: 62 HLHYFLHLDFTSVQRNNVMAFAFTTMVIVLLVGLSLWIIFSVHREMMA 109 >gi|303246930|ref|ZP_07333206.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio fructosovorans JJ] gi|302491637|gb|EFL51520.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio fructosovorans JJ] Length = 110 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 + + N G+ + +GF+LSL+LT+IPF +VM G + A+ QI Sbjct: 4 THASGDNDVRAGSGSFRTYTLGFVLSLVLTVIPFALVMTGAL-PHGATLACLYAAAVIQI 62 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 +VHL +FLH+ W++++++FT ++ + GS+W+MY L++ M Sbjct: 63 VVHLHYFLHLDRSSGMYWNMLSLLFTFFIMFLFIGGSLWIMYSLHSRM 110 >gi|113972153|ref|YP_735946.1| cytochrome C oxidase subunit IV [Shewanella sp. MR-4] gi|113886837|gb|ABI40889.1| cytochrome C oxidase subunit IV [Shewanella sp. MR-4] Length = 113 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 2/109 (1%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 +D+ H + + + K LVGF LS++LT IPF VM F ++ +V+ A+ QI Sbjct: 7 SHDHSHGADDLA-ASIKSYLVGFGLSVVLTAIPFWAVMTHHFE-QSTTLAIVVVTALVQI 64 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +VHL +FLH+ E + + +FT +++ + S+W++ N MM Sbjct: 65 LVHLKYFLHLDFSKEGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113 >gi|109897618|ref|YP_660873.1| cytochrome C oxidase subunit IV [Pseudoalteromonas atlantica T6c] gi|109699899|gb|ABG39819.1| cytochrome bo3 quinol oxidase subunit 4 [Pseudoalteromonas atlantica T6c] Length = 105 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H+ ++G+ K L+GF+LS+ILT IPF +VM G F K+++ ++V A+ QI+VHL Sbjct: 2 SHSAEATAHGSVKSYLIGFVLSVILTAIPFWMVMSGHF-GKSVLFYSVVSFALVQIVVHL 60 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +FLH++ V+ A +FT +++ + S+W++Y N MM Sbjct: 61 KYFLHLNFSVKGRLDTFAFLFTALIIVMVVGLSIWIIYSANAMMM 105 >gi|148978616|ref|ZP_01815043.1| hypothetical protein VSWAT3_04531 [Vibrionales bacterium SWAT-3] gi|145962282|gb|EDK27564.1| hypothetical protein VSWAT3_04531 [Vibrionales bacterium SWAT-3] Length = 103 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M H K ++GF+ SLILTIIPF +V + + CA+ QI VH +F Sbjct: 1 MEQHLDSGAKDYVIGFVASLILTIIPFYVVWAHALPS-TETYVVLFGCALVQIFVHFKYF 59 Query: 69 LHMSTKV-EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM K + W++++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMEVKTTDGQWNLVSLMFTAIVVLILIAGSVWIIYNMNVNM 101 >gi|153833176|ref|ZP_01985843.1| cytOchrome o ubiquinol oxidase subunit IV [Vibrio harveyi HY01] gi|148870606|gb|EDL69514.1| cytOchrome o ubiquinol oxidase subunit IV [Vibrio harveyi HY01] Length = 103 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M H + GFI SLILT+IPF V D + CA+ QI VH +F Sbjct: 1 MENHLDTGASDYVKGFIASLILTVIPFYCVWAQVLPD-TATYAVLFGCALVQIFVHFKYF 59 Query: 69 LHMSTKV-EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM K E W+ ++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMEVKTPEGQWNFVSLMFTAIVVLILIAGSIWIIYNMNVNM 101 >gi|134296911|ref|YP_001120646.1| cytochrome C oxidase subunit IV [Burkholderia vietnamiensis G4] gi|134140068|gb|ABO55811.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia vietnamiensis G4] Length = 110 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 1/103 (0%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 + ++GT + +VGF+LS++LT FG+VM G K + VL AQI+VHLV F Sbjct: 8 HHDEAHGTARGYVVGFVLSVLLTAASFGLVMAGVLAPKAAVIALAVLA-FAQILVHLVCF 66 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 LHM+T W++MA +T++ I VG++WVM++++ NMMS Sbjct: 67 LHMNTASSQRWNVMAFSYTVLTALILIVGTLWVMHNVSMNMMS 109 >gi|71274827|ref|ZP_00651115.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa Dixon] gi|71899871|ref|ZP_00682020.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa Ann-1] gi|170729928|ref|YP_001775361.1| cytochrome O ubiquinol oxidase subunit IV [Xylella fastidiosa M12] gi|71164559|gb|EAO14273.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa Dixon] gi|71730388|gb|EAO32470.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa Ann-1] gi|167964721|gb|ACA11731.1| cytochrome O ubiquinol oxidase subunit IV [Xylella fastidiosa M12] Length = 113 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 4/113 (3%) Query: 1 MKYDNIHNMNMHSYGT---KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCA 57 M + H+ K L+GF+L++ILT IPF IVM F K + A Sbjct: 1 MSHHPHHSSEPTVPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSF-SKETTVALVSALA 59 Query: 58 IAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q++VHLV+FLHM E ++ +F+++++ I VGS+WVM++LN +MM Sbjct: 60 AVQMLVHLVYFLHMDRSEEQRSNVHVALFSLLVIGIVIVGSLWVMHNLNIHMM 112 >gi|156976719|ref|YP_001447625.1| cytochrome o ubiquinol oxidase protein CyoD [Vibrio harveyi ATCC BAA-1116] gi|156528313|gb|ABU73398.1| hypothetical protein VIBHAR_05494 [Vibrio harveyi ATCC BAA-1116] Length = 103 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M H + GFI SLILT+IPF V D + CA+ QI VH +F Sbjct: 1 MENHLDTGASDYVKGFIASLILTVIPFYCVWAQLLPD-TATYAVLFGCALVQIFVHFKYF 59 Query: 69 LHMSTKV-EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM K E W+ ++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMEVKTPEGQWNFVSLMFTAIVVLILIAGSIWIIYNMNVNM 101 >gi|254500701|ref|ZP_05112852.1| cytochrome o ubiquinol oxidase subunit IV [Labrenzia alexandrii DFL-11] gi|222436772|gb|EEE43451.1| cytochrome o ubiquinol oxidase subunit IV [Labrenzia alexandrii DFL-11] Length = 104 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + + + + L GF L+++LT IPFG+V G + I A+ Q++VHLVF Sbjct: 3 HTDHTEHRSLGTYLTGFALAIVLTAIPFGLVWTGALTGPAV-YGVIAAAAVIQVLVHLVF 61 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 FLH++ K G ++ + F +++ I GS+W+M+ L++ MM Sbjct: 62 FLHLNFKSTPGENLFFLAFAAVLICIMVGGSLWIMFDLHHRMM 104 >gi|84386634|ref|ZP_00989660.1| hypothetical protein V12B01_00852 [Vibrio splendidus 12B01] gi|84378440|gb|EAP95297.1| hypothetical protein V12B01_00852 [Vibrio splendidus 12B01] Length = 103 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M H + GFI SLILTIIPF IV + + CA+ QI VH +F Sbjct: 1 MEQHLDSGATDYVKGFIASLILTIIPFYIVWAHVLPS-TETYVILFGCALVQIFVHFKYF 59 Query: 69 LHMS-TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM + W++++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMEAKSSDGRWNLVSLMFTAIVVLILIAGSVWIIYNMNVNM 101 >gi|329114807|ref|ZP_08243564.1| Ubiquinol oxidase subunit IV [Acetobacter pomorum DM001] gi|326695938|gb|EGE47622.1| Ubiquinol oxidase subunit IV [Acetobacter pomorum DM001] Length = 110 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + + S+G+ ++GF+L+++LT++ FG+VM + + A+ Q++VHL + Sbjct: 7 SSSGESHGSVSSYIIGFVLAVVLTVLSFGVVMSHSLSPAGTLAA-VSALALVQVLVHLHY 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 FLHM E W+ M +FT+ VAI VGS+++M + +MMS Sbjct: 66 FLHMGGDSEQRWNNMCFVFTVAFVAILIVGSVFIMNNTALHMMS 109 >gi|163800404|ref|ZP_02194305.1| hypothetical protein 1103602000595_AND4_06974 [Vibrio sp. AND4] gi|159175847|gb|EDP60641.1| hypothetical protein AND4_06974 [Vibrio sp. AND4] Length = 103 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M H + GFI SLILT+IPF V D + + CA+ QI VH +F Sbjct: 1 MESHLDTGASDYVKGFIASLILTVIPFYCVWAKVLPD-AATYVVLFGCALVQIFVHFKYF 59 Query: 69 LHMSTKV-EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM K E W+ ++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMEVKTPEGQWNFVSLMFTAIVVLILIAGSIWIIYNMNVNM 101 >gi|319762686|ref|YP_004126623.1| cytochrome o ubiquinol oxidase subunit iv [Alicycliphilus denitrificans BC] gi|330824827|ref|YP_004388130.1| cytochrome o ubiquinol oxidase subunit IV [Alicycliphilus denitrificans K601] gi|317117247|gb|ADU99735.1| cytochrome o ubiquinol oxidase subunit IV [Alicycliphilus denitrificans BC] gi|329310199|gb|AEB84614.1| cytochrome o ubiquinol oxidase subunit IV [Alicycliphilus denitrificans K601] Length = 124 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 41/98 (41%), Positives = 67/98 (68%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T+ + GF+L++ILT IPF +VM G D+ L + L A QI+VH+V+FLHM+ K+ Sbjct: 26 TRGDYVKGFVLAVILTAIPFWLVMNGAIQDRTTGALVLGLFAAVQIVVHMVYFLHMNGKI 85 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113 + GW++++ +FTI+ +A+ G++WVM+H+N MM Sbjct: 86 QGGWTMLSTLFTIVFLAVTIAGTLWVMFHMNAAMMPSH 123 >gi|127511303|ref|YP_001092500.1| cytochrome C oxidase subunit IV [Shewanella loihica PV-4] gi|126636598|gb|ABO22241.1| cytochrome C oxidase subunit IV [Shewanella loihica PV-4] Length = 108 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M H + + + K L GF+LS++LT IPF VM + +++ A+ Q Sbjct: 1 MSQATTHGQDDLA-ASIKSYLTGFLLSVVLTGIPFWAVMTHSLE-TSTTLAIVLVLAVVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHL +FLH+ E + ++ +FT +++ + S+W++Y N+ MM Sbjct: 59 ILVHLKYFLHLDFSKEGKVNTLSFMFTALVIVMVVGLSVWIIYAANDLMM 108 >gi|332184971|ref|ZP_08386720.1| cytochrome o ubiquinol oxidase subunit IV [Sphingomonas sp. S17] gi|332014695|gb|EGI56751.1| cytochrome o ubiquinol oxidase subunit IV [Sphingomonas sp. S17] Length = 101 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 47/91 (51%), Positives = 65/91 (71%) Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80 ++GF+LS+ILT IPF VM G D L I+ A QI+VH+++FLHM+TK E GW+ Sbjct: 1 MIGFVLSVILTAIPFWAVMTGALGDTQTTALVIMGLAFVQIVVHMIYFLHMNTKSEGGWT 60 Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 +MA++FT ++V I GS+WVMYH+N NMM Sbjct: 61 MMALVFTAVLVVITLSGSIWVMYHMNTNMMP 91 >gi|172061019|ref|YP_001808671.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria MC40-6] gi|171993536|gb|ACB64455.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria MC40-6] Length = 110 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + +G+ + GFILS++LT FG+VM G + L Q Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVVLTAASFGLVMGGVLSPHASLIALAALA-FVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109 >gi|115352155|ref|YP_773994.1| cytochrome C oxidase subunit IV [Burkholderia ambifaria AMMD] gi|171318688|ref|ZP_02907832.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria MEX-5] gi|254252017|ref|ZP_04945335.1| cytochrome o ubiquinol oxidase [Burkholderia dolosa AUO158] gi|115282143|gb|ABI87660.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia ambifaria AMMD] gi|124894626|gb|EAY68506.1| cytochrome o ubiquinol oxidase [Burkholderia dolosa AUO158] gi|171096123|gb|EDT41048.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria MEX-5] Length = 110 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + +G+ + GFILS++LT FG+VM G + L Q Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVLLTAASFGLVMGGVLSPHASLIALAALA-FVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109 >gi|167585492|ref|ZP_02377880.1| cytochrome C oxidase subunit IV [Burkholderia ubonensis Bu] Length = 110 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 1/103 (0%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 + ++GT +VGF+LS++LT FG+VM G K + VL AQI+VHLV F Sbjct: 8 HHDEAHGTAGGYIVGFVLSVLLTAASFGLVMGGVLAPKAAVIALAVLA-FAQILVHLVCF 66 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 LHM+T W++MA +T++ I VG++WVM++++ NMMS Sbjct: 67 LHMNTSSSQRWNVMAFSYTVLTALILIVGTLWVMHNVSMNMMS 109 >gi|152994134|ref|YP_001338969.1| cytochrome o ubiquinol oxidase subunit IV [Marinomonas sp. MWYL1] gi|150835058|gb|ABR69034.1| Cytochrome o ubiquinol oxidase subunit IV [Marinomonas sp. MWYL1] Length = 107 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 2/107 (1%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + H+ +S+G+ K + GF+LS+ILT IPF +VM F DK +TI+L AI QI VH Sbjct: 2 SDHSSEANSHGSVKSYVTGFVLSVILTGIPFWMVMTEAF-DKGPTYVTIILLAIVQIFVH 60 Query: 65 LVFFLHMSTKVEDG-WSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 L +FLH++ E G + +F ++++ + S+W++Y N MM Sbjct: 61 LKYFLHLNFTSEQGKLDAYSFLFALMIIVMVVALSVWIIYASNAMMM 107 >gi|260769714|ref|ZP_05878647.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio furnissii CIP 102972] gi|260615052|gb|EEX40238.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio furnissii CIP 102972] gi|315182290|gb|ADT89203.1| cytOchrome o ubiquinol oxidase subunit IV [Vibrio furnissii NCTC 11218] Length = 104 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 2/103 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 N H K + GFI SLILTIIPF V + + + CAI Q+ VH V+F Sbjct: 2 SNQHVDSGKSDYIKGFIASLILTIIPFYFVATQSL-PEAVTFALMFGCAIVQVFVHFVYF 60 Query: 69 LHMSTKVE-DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 LHM T+ E W++++++FT ++V I GS+W+M++LN NMM Sbjct: 61 LHMETRTEDGRWNLVSLMFTALVVLILIGGSIWIMWNLNINMM 103 >gi|170701549|ref|ZP_02892499.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria IOP40-10] gi|170133543|gb|EDT01921.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria IOP40-10] Length = 110 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + +G+ + GFILS++LT FG+VM G + L + Q Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVLLTAASFGLVMGGVLSPHASLIALAALA-LVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109 >gi|325921009|ref|ZP_08182892.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas gardneri ATCC 19865] gi|325548516|gb|EGD19487.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas gardneri ATCC 19865] Length = 111 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 41/111 (36%), Positives = 70/111 (63%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSY-GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + H ++ G K L+GF++++ILT+IPF +VM G F K + + I L A Sbjct: 1 MANHHAHETAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTVIVISLMAAV 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q++VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM Sbjct: 60 QMLVHMVYFLHMDRSPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110 >gi|312881378|ref|ZP_07741175.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio caribbenthicus ATCC BAA-2122] gi|309371018|gb|EFP98473.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio caribbenthicus ATCC BAA-2122] Length = 103 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M H + + GF+ SLILT+IPF + + + CAI QI+VH +F Sbjct: 1 MGQHVETSSSDYVKGFVASLILTVIPFYLAYTKAL-PNGVTYALLFGCAIVQILVHFKYF 59 Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM K E W+I+++ FT I+V I GS+W++Y++ NM Sbjct: 60 LHMEAKTSEGQWNIVSLAFTAIIVLILIAGSVWIIYNMTANM 101 >gi|186472485|ref|YP_001859827.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum STM815] gi|184194817|gb|ACC72781.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum STM815] Length = 113 Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 3/113 (2%) Query: 1 MKYDNIHNMNMH-SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M + N H ++ +G +VGF+L+++LT FGIVM+G+ L + A+ Sbjct: 1 MAHSNSHALDAEAGHGGIGGYVVGFVLAVVLTAAAFGIVMQGWL-PAAYAPLVLAALAVV 59 Query: 60 QIIVHLVFFLHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 QI+VHLV FLHMS W+ +A+ +T++ G++WVM++++ NMMS Sbjct: 60 QIVVHLVCFLHMSVSTSGQRWNTLALAYTVLAAMFLVFGTVWVMHNVSMNMMS 112 >gi|289670391|ref|ZP_06491466.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 111 Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + G K L+GF++++ILT+IPF +VM G F K + + I + A Q++ Sbjct: 4 HRHTETAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTVVVISVMAAVQML 62 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110 >gi|330819565|ref|YP_004348427.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia gladioli BSR3] gi|327371560|gb|AEA62915.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia gladioli BSR3] Length = 126 Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74 GT K ++G ILS++LT + FG VM + +V C +AQ+IV L +FLH+ T Sbjct: 19 GTLKGYVIGMILSVLLTFVSFGAVMTDIVPRGWGLAAIVVAC-VAQLIVQLFYFLHIGTA 77 Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113 + + T ++A+ S+WV+++ N NMM Sbjct: 78 RSQRANTGIFLCTGFLIAVIVGLSLWVIHNANVNMMPTH 116 >gi|146338788|ref|YP_001203836.1| cytochrome o ubiquinol oxidase subunit IV [Bradyrhizobium sp. ORS278] gi|146191594|emb|CAL75599.1| cytochrome o ubiquinol oxidase, subunit IV (Ubiquinol oxidase chain D) [Bradyrhizobium sp. ORS278] Length = 123 Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 1/103 (0%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74 GT++ L+GF LS++LT IPF +VM G DK + L I+ A Q++VH++FFLHM+TK Sbjct: 20 GTRQGQLIGFGLSVVLTAIPFLLVMNGSL-DKQVSALIIMAFAAVQVVVHMIFFLHMNTK 78 Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117 E GW++MA+IFTIIMV I GS+WVM+HL NMM + M S Sbjct: 79 AEGGWTMMALIFTIIMVVIALSGSLWVMHHLTTNMMPVHEMGS 121 >gi|167566667|ref|ZP_02359583.1| ubiquinol oxidase, subunit IV [Burkholderia oklahomensis EO147] gi|167573742|ref|ZP_02366616.1| ubiquinol oxidase, subunit IV [Burkholderia oklahomensis C6786] Length = 110 Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 D + + ++GT + GFILS++LT FG+V+ G + L QI+V Sbjct: 3 DTHLSHDGEAHGTVGGYVAGFILSVLLTAASFGLVLSGALSSHASLIALAALA-FVQIVV 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLHM+ W++MA +T++ AI VG++WVM+++ NMMS Sbjct: 62 HLVYFLHMNASSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVGMNMMS 109 >gi|433189|dbj|BAA02483.1| ubiquinol oxidase subunit IV precursor [Acetobacter aceti] gi|229365480|dbj|BAH57988.1| ubiquinol oxidase subunit IV [Acetobacter lovaniensis] Length = 109 Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 1/102 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + + S+G+ ++GF+L+++LT++ FG+VM I A+ Q++VHL + Sbjct: 7 SSSGESHGSVSSYIIGFVLAVVLTVLSFGVVMTPQ-PSPAGTLAAISALALVQVLVHLHY 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 FLHM E W+ M +FT+ VAI VG++++M + + M Sbjct: 66 FLHMGGSSEQRWNNMCFVFTVAFVAILIVGTVFIMNNTEHMM 107 >gi|114561409|ref|YP_748922.1| cytochrome C oxidase subunit IV [Shewanella frigidimarina NCIMB 400] gi|114332702|gb|ABI70084.1| cytochrome C oxidase subunit IV [Shewanella frigidimarina NCIMB 400] Length = 109 Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + + K LVGF+LS++LT IPF VM F D +V+ A+ Q Sbjct: 1 MSNAHASHGEGDFSASVKSYLVGFVLSVVLTGIPFWSVMTHQF-DHMTTLWVVVITALVQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHL +FLH+ E + + +FT +++ + S+W++Y N MM Sbjct: 60 IVVHLKYFLHLDFSKEGRINTFSFLFTALIIVMVVGLSVWIIYAANELMM 109 >gi|296533148|ref|ZP_06895777.1| cytochrome o ubiquinol oxidase subunit IV [Roseomonas cervicalis ATCC 49957] gi|296266520|gb|EFH12516.1| cytochrome o ubiquinol oxidase subunit IV [Roseomonas cervicalis ATCC 49957] Length = 123 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 D + H++G L G + SL LT +PF IV+ G+ + + ++L A+AQ+ V Sbjct: 15 DPAAAQSAHAHGDALGYLRGLLWSLALTALPFAIVLGGWL-PRELAVPAVLLLAVAQMAV 73 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 HLV+FLH+ T + W++MA +FT ++V I +GS+WVM +L+ NMM Sbjct: 74 HLVYFLHLRTAPGERWTLMAFLFTAVVVGIVVIGSLWVMQNLDANMMP 121 >gi|319424516|gb|ADV52590.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella putrefaciens 200] Length = 113 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Query: 2 KYDNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 + + H+ + K L+GF+LS++LT IPF VM F K +++ AI Q Sbjct: 5 SHTDKHSHGTDDLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFE-KATTLSLVLVMAIVQ 63 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHL +FLH+ E + + +FT +++ + S+W++ N MM Sbjct: 64 IVVHLKYFLHLDFSKEGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113 >gi|21230619|ref|NP_636536.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769385|ref|YP_244147.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris pv. campestris str. 8004] gi|188992572|ref|YP_001904582.1| Cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris pv. campestris str. B100] gi|21112200|gb|AAM40460.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574717|gb|AAY50127.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris pv. campestris str. 8004] gi|167734332|emb|CAP52542.1| Cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris pv. campestris] Length = 111 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 68/108 (62%), Gaps = 1/108 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + N G K L+GF++++ILT+IPF +VM G F K + + I + A Q++ Sbjct: 4 HHHTENAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTVIVISVMAAVQML 62 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110 >gi|332307456|ref|YP_004435307.1| cytochrome o ubiquinol oxidase subunit IV [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174785|gb|AEE24039.1| cytochrome o ubiquinol oxidase subunit IV [Glaciecola agarilytica 4H-3-7+YE-5] Length = 105 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 1/105 (0%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H+ ++G+ K LVGF+LS+ILT IPF +VM G F K+++ ++V AI QI+VHL Sbjct: 2 SHSAETTAHGSVKSYLVGFVLSVILTGIPFWMVMSGHF-GKSVLFYSVVSFAIVQIVVHL 60 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +FLH+ V+ A +FT +++ + S+W++Y N MM Sbjct: 61 KYFLHLDFSVKGRMDTFAFLFTALIIVMVVGLSIWIIYSANAMMM 105 >gi|153837559|ref|ZP_01990226.1| cytOchrome o ubiquinol oxidase subunit IV [Vibrio parahaemolyticus AQ3810] gi|149749056|gb|EDM59867.1| cytOchrome o ubiquinol oxidase subunit IV [Vibrio parahaemolyticus AQ3810] gi|328470437|gb|EGF41348.1| hypothetical protein VP10329_06552 [Vibrio parahaemolyticus 10329] Length = 103 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M H + + GF+ SLILT+IPF V + + + CA+ QI VH +F Sbjct: 1 MGQHVETSSSDYVKGFVASLILTVIPFYFVWAQTL-PASTTYVVMFTCALVQIFVHFKYF 59 Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM K + W++++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMEAKTSDGRWNLVSLMFTAIVVLILIAGSIWIIYNMNVNM 101 >gi|21321322|dbj|BAB97176.1| ubiquinol oxidase subunit IV [Acetobacter pasteurianus] Length = 109 Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 1/102 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + + S+G+ ++GF+L+++LT++ FG+VM + + A+ Q++VHL + Sbjct: 7 SSSGESHGSVSSYIIGFVLAVVLTVLSFGVVMSHSLSPAGTLAA-VSALALVQVLVHLHY 65 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 FLHM E W+ M +FT+ VAI VGS+++M + + M Sbjct: 66 FLHMGGDSEQRWNNMCFVFTVAFVAILIVGSVFIMNNTEHMM 107 >gi|89072118|ref|ZP_01158714.1| hypothetical protein SKA34_08788 [Photobacterium sp. SKA34] gi|89052219|gb|EAR57670.1| hypothetical protein SKA34_08788 [Photobacterium sp. SKA34] Length = 103 Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 2/92 (2%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS-TKVED 77 + GFI SLI+T+IPF V F + ++ CAI QI VH +FLHM E Sbjct: 11 DYVKGFIASLIITVIPFYCVWAKIFT-EATTYAVLLGCAIVQIFVHFKYFLHMEAKSSEG 69 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 W+I++++FT I+V I GS+W++Y++N NM Sbjct: 70 KWNIVSLMFTSIVVLILIAGSVWIIYNMNVNM 101 >gi|28900485|ref|NP_800140.1| hypothetical protein VPA0630 [Vibrio parahaemolyticus RIMD 2210633] gi|260365638|ref|ZP_05778159.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus K5030] gi|260877438|ref|ZP_05889793.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus AN-5034] gi|260898919|ref|ZP_05907360.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus Peru-466] gi|260901247|ref|ZP_05909642.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus AQ4037] gi|28808865|dbj|BAC61973.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308089178|gb|EFO38873.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus Peru-466] gi|308090840|gb|EFO40535.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus AN-5034] gi|308106803|gb|EFO44343.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus AQ4037] gi|308111444|gb|EFO48984.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus K5030] Length = 103 Score = 97.5 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 2/102 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M H + + GF+ SLILT+IPF V + + + CA+ QI VH +F Sbjct: 1 MGQHVETSSSDYVKGFVASLILTVIPFYFVWAQTL-PASATYVVMFTCALVQIFVHFKYF 59 Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LHM K + W++++++FT I+V I GS+W++Y++N NM Sbjct: 60 LHMEAKTSDGRWNLVSLMFTAIVVLILIAGSIWIIYNMNVNM 101 >gi|288962725|ref|YP_003453019.1| cytochrome o ubiquinol oxidase operon protein [Azospirillum sp. B510] gi|288914991|dbj|BAI76475.1| cytochrome o ubiquinol oxidase operon protein [Azospirillum sp. B510] Length = 139 Score = 97.1 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 53/101 (52%), Positives = 74/101 (73%), Gaps = 1/101 (0%) Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70 ++GT ++GF+LS+ILT+IPF +VM G D + ++ A+ QIIVH+V+FLH Sbjct: 30 AGAHGTFGSYMIGFVLSVILTVIPFWLVMNGTL-DNVTTTVVVLALAVVQIIVHMVYFLH 88 Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 M+ + E GWS++AMIFTII+V I F GS+WVMYHLN+NMM Sbjct: 89 MNGRAEGGWSMLAMIFTIIVVVIMFSGSLWVMYHLNHNMMP 129 >gi|170724797|ref|YP_001758823.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella woodyi ATCC 51908] gi|169810144|gb|ACA84728.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella woodyi ATCC 51908] Length = 111 Score = 97.1 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 62/103 (60%), Gaps = 1/103 (0%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 N + + G+ K L+GF+LS++LT IPF V+ F DK + +++ A+ QI+VHL + Sbjct: 10 NSSANFMGSVKSYLMGFMLSVVLTAIPFWAVITHHF-DKPVTLGLVLVTAVVQIVVHLKY 68 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 FLH+ E + + +FT +++ + S+W++Y N+ MM Sbjct: 69 FLHLDFSKEGKLNTFSFLFTALIIVMVVGLSVWIIYAANDLMM 111 >gi|134296073|ref|YP_001119808.1| cytochrome C oxidase subunit IV [Burkholderia vietnamiensis G4] gi|134139230|gb|ABO54973.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia vietnamiensis G4] Length = 110 Score = 97.1 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + + M +G+ GFILS++LT FG+V+ G + L Q Sbjct: 1 MAHSHSSQM-EEGHGSVGGYFAGFILSVLLTAASFGLVLGGVLSPHASLIALAALA-FVQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109 >gi|58581255|ref|YP_200271.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623175|ref|YP_450547.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575779|ref|YP_001912708.1| cytOchrome o ubiquinol oxidase subunit IV [Xanthomonas oryzae pv. oryzae PXO99A] gi|289662732|ref|ZP_06484313.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris pv. vasculorum NCPPB702] gi|58425849|gb|AAW74886.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367115|dbj|BAE68273.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188520231|gb|ACD58176.1| cytOchrome o ubiquinol oxidase subunit IV [Xanthomonas oryzae pv. oryzae PXO99A] Length = 111 Score = 97.1 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + G K L+GF++++ILT+IPF +VM G F K + + I + A Q++ Sbjct: 4 HHHTETAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTVVVISVMAAVQML 62 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110 >gi|166713085|ref|ZP_02244292.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas oryzae pv. oryzicola BLS256] Length = 111 Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 1/108 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + G K L+GF++++ILT+IPF +VM G F K + I + A Q++ Sbjct: 4 HHHTETAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTVTVISVMAAVQML 62 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110 >gi|325914849|ref|ZP_08177184.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas vesicatoria ATCC 35937] gi|325538940|gb|EGD10601.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas vesicatoria ATCC 35937] Length = 111 Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + G K L+GF++++ILT+IPF +VM G F K + + I + A Q++ Sbjct: 4 HHHTETAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTIVVISVMAAVQML 62 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110 >gi|146294942|ref|YP_001185366.1| cytochrome C oxidase subunit IV [Shewanella putrefaciens CN-32] gi|145566632|gb|ABP77567.1| cytochrome C oxidase subunit IV [Shewanella putrefaciens CN-32] Length = 113 Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 2 KYDNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 + + H+ S + K L+GF+LS++LT IPF VM F K +++ AI Q Sbjct: 5 SHTDKHSHGTDSLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFE-KATTLSLVLVMAIVQ 63 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I+VHL +FLH+ E + + +FT +++ + S+W++ N MM Sbjct: 64 IVVHLKYFLHLDFSKEGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113 >gi|21242014|ref|NP_641596.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas axonopodis pv. citri str. 306] gi|78046866|ref|YP_363041.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294627029|ref|ZP_06705619.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664345|ref|ZP_06729709.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325928656|ref|ZP_08189835.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas perforans 91-118] gi|21107412|gb|AAM36132.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas axonopodis pv. citri str. 306] gi|78035296|emb|CAJ22941.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292598691|gb|EFF42838.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605885|gb|EFF49172.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325540984|gb|EGD12547.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas perforans 91-118] Length = 111 Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + G K L+GF++++ILT+IPF +VM G F K + + I + A Q++ Sbjct: 4 HHHTDTAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTIVVISVMAAVQML 62 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110 >gi|193212540|ref|YP_001998493.1| cytochrome o ubiquinol oxidase subunit IV [Chlorobaculum parvum NCIB 8327] gi|193086017|gb|ACF11293.1| cytochrome o ubiquinol oxidase subunit IV [Chlorobaculum parvum NCIB 8327] Length = 108 Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 2/110 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M+ +I N + + K + GFIL+++LTII F +V+ G K I + + A AQ Sbjct: 1 MEQTHIENTATE-HVSYKNYITGFILAVVLTIISFSLVLTGVV-PKQIAVIGLFAAAAAQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I VHL +FLH+ + W+++ + FT +++ I G++WV++ LN+ MM Sbjct: 59 IAVHLYYFLHLDSSKSQRWNVITISFTALLLFIFIAGTIWVIHTLNSRMM 108 >gi|120596925|ref|YP_961499.1| cytochrome C oxidase subunit IV [Shewanella sp. W3-18-1] gi|160877455|ref|YP_001556771.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica OS195] gi|217975292|ref|YP_002360043.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica OS223] gi|120557018|gb|ABM22945.1| cytochrome C oxidase subunit IV [Shewanella sp. W3-18-1] gi|160862977|gb|ABX51511.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica OS195] gi|217500427|gb|ACK48620.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica OS223] gi|315269657|gb|ADT96510.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica OS678] Length = 113 Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K L+GF+LS++LT IPF VM F K +++ AI QI+VHL +FLH+ Sbjct: 20 SIKSYLMGFVLSVVLTAIPFWAVMTHHFE-KATTLSLVLVMAIVQIVVHLKYFLHLDFSK 78 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 E + + +FT +++ + S+W++ N MM Sbjct: 79 EGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113 >gi|304412072|ref|ZP_07393682.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica OS183] gi|307305967|ref|ZP_07585713.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica BA175] gi|304349622|gb|EFM14030.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica OS183] gi|306911460|gb|EFN41886.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica BA175] Length = 113 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K L+GF+LS++LT IPF VM F K +++ AI QI+VHL +FLH+ Sbjct: 20 SIKSYLMGFVLSVVLTAIPFWAVMTHHFE-KATTLSLVLVMAIVQIVVHLKYFLHLDFSK 78 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 E + + +FT +++ + S+W++ N MM Sbjct: 79 EGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113 >gi|153002719|ref|YP_001368400.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica OS185] gi|151367337|gb|ABS10337.1| Cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica OS185] Length = 113 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 4/112 (3%) Query: 2 KYDNIHNMNMHSY---GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAI 58 + + H + + + K L+GF+LS++LT IPF VM F K +++ AI Sbjct: 3 AHSHTHKPSHGTDDLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFE-KATTLSLVLVMAI 61 Query: 59 AQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 QI+VHL +FLH+ E + + +FT +++ + S+W++ N MM Sbjct: 62 VQIVVHLKYFLHLDFSKEGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113 >gi|114049401|ref|YP_739951.1| cytochrome C oxidase subunit IV [Shewanella sp. MR-7] gi|113890843|gb|ABI44894.1| cytochrome C oxidase subunit IV [Shewanella sp. MR-7] Length = 113 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 1/95 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K LVGF+LS++LT IPF VM F ++ +V+ A+ QI+VHL +FLH+ Sbjct: 20 SIKSYLVGFVLSVVLTAIPFWAVMTHHFE-QSTTLAIVVVTALVQILVHLKYFLHLDFSK 78 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 E + + +FT +++ + S+W++ N MM Sbjct: 79 EGKINTFSFLFTALIIVMVVGLSVWIILEANALMM 113 >gi|326793470|ref|YP_004311290.1| cytochrome o ubiquinol oxidase subunit IV [Marinomonas mediterranea MMB-1] gi|326544234|gb|ADZ89454.1| cytochrome o ubiquinol oxidase subunit IV [Marinomonas mediterranea MMB-1] Length = 108 Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 2/107 (1%) Query: 5 NIHNMNMH-SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 + H+ + H ++G+ +VGF+LS++LT+IPF VM F D+ + IV+ A+ QI V Sbjct: 2 SQHDHDSHDAHGSVSSYVVGFVLSVVLTVIPFWAVMTSAF-DRATLFAVIVVTAVVQIFV 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 HL +FLH++ E ++ IFT I++ + S+W++Y MM Sbjct: 61 HLKYFLHLNFTKEGKLDTLSFIFTAIIIIMVVALSIWIIYESVLMMM 107 >gi|89073979|ref|ZP_01160485.1| cytochrome o ubiquinol oxidase subunit IV [Photobacterium sp. SKA34] gi|89050307|gb|EAR55811.1| cytochrome o ubiquinol oxidase subunit IV [Photobacterium sp. SKA34] Length = 112 Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 44/110 (40%), Positives = 72/110 (65%), Gaps = 1/110 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H ++G+ K+ L G ILS+ILT++PF +VM G K ++ I++ A+AQ Sbjct: 1 MANSSEHGQGGQAHGSVKEYLNGLILSIILTVVPFAMVMAG-IGSKPLIIGVIMVFAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I V LV+FLHM+ + W+ + +F +++VAI +GS+W+M HLN+NM+ Sbjct: 60 IFVQLVYFLHMNASSKQMWNTSSAVFVVVIVAIILIGSLWIMEHLNHNML 109 >gi|58040344|ref|YP_192308.1| cytochrome o ubiquinol oxidase subunit IV [Gluconobacter oxydans 621H] gi|58002758|gb|AAW61652.1| Cytochrome o ubiquinol oxidase subunit IV [Gluconobacter oxydans 621H] Length = 111 Score = 95.2 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 1/111 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M M S+G+ L+GF+L++ILT+ F VM + + + A+ Q Sbjct: 1 MTQAPTTTMTGDSHGSYPSYLIGFVLAVILTVASFAAVMTHALSP-GMTMAALTVLAVVQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 I+VHLVFFLHM+T E W++M IF V + G++++M+ NMMS Sbjct: 60 IVVHLVFFLHMNTSTEQSWNLMCFIFAAASVIVIIGGTIFIMHDTAINMMS 110 >gi|330502492|ref|YP_004379361.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas mendocina NK-01] gi|328916778|gb|AEB57609.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas mendocina NK-01] Length = 111 Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 71/112 (63%), Gaps = 5/112 (4%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFL--DKNIMCLTIVLCAI 58 M + + H + K L GFILS+ILT+IPF +VM L + +T+VL + Sbjct: 1 MAHQDNHAAHAVG---FKDYLTGFILSVILTVIPFMLVMHPEVLGLSRGATLITVVLFGL 57 Query: 59 AQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 AQ++VHLV+FLHM T E W++++MIFT++++A S+W+M+ ++ +MM Sbjct: 58 AQVLVHLVYFLHMKTDAEGRWNVVSMIFTVLIIAFVVGLSVWIMWSMHYHMM 109 >gi|254234442|ref|ZP_04927765.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa C3719] gi|126166373|gb|EAZ51884.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa C3719] Length = 111 Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 1/108 (0%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H+ + +G+ +GF+LS+ILT IPF +VM G F ++ LT+V+ + Q++VHL Sbjct: 5 AHDNHGAGHGSLGSYAIGFVLSVILTAIPFYMVMDGGF-SRHATILTMVVLGLVQVVVHL 63 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113 + FLHM+ E W++MA IFT+I++ + S+W+++ + MM M Sbjct: 64 ICFLHMNKSSEGRWNVMAFIFTVIVILLVVGLSLWIIFSADMLMMPMP 111 >gi|90579540|ref|ZP_01235349.1| cytochrome o ubiquinol oxidase subunit IV [Vibrio angustum S14] gi|90439114|gb|EAS64296.1| cytochrome o ubiquinol oxidase subunit IV [Vibrio angustum S14] Length = 112 Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 45/110 (40%), Positives = 73/110 (66%), Gaps = 1/110 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + H ++G+ K+ L G ILS+ILT++PF +VM G K ++ I++ A+AQ Sbjct: 1 MANSSEHGQGGQAHGSVKEYLNGLILSIILTVVPFVMVMAG-IGSKPLIIGVIMVFAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 I V LV+FLHM+T + W+ + +F +++VAI +GS+W+M HLN+NM+ Sbjct: 60 IFVQLVYFLHMNTSSKQMWNTSSAVFVVVIVAIILIGSLWIMEHLNHNML 109 >gi|148254209|ref|YP_001238794.1| cytochrome O ubiquinol oxidase protein subunit IV [Bradyrhizobium sp. BTAi1] gi|146406382|gb|ABQ34888.1| cytochrome bb3 quinol oxidase subunit 4 [Bradyrhizobium sp. BTAi1] Length = 130 Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 5/116 (4%) Query: 8 NMNMHSYGTKKQ----CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 +G + + G L+++LT F I +I IV AIAQ+ V Sbjct: 15 APGEQQHGDLRSRILFHVAGLGLAVLLTAASFFIAGTNLVWQPSIPVALIV-LAIAQMGV 73 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 HLVFFLH++T ++ +++A+ F +I+V + GS+W+M +LN+NMM M+ + + Sbjct: 74 HLVFFLHITTGPDNTNNVLALAFGLIIVFLVVGGSLWIMSNLNHNMMPMDPLMQMQ 129 >gi|20378346|gb|AAM20917.1|AF439739_4 cytochrome bo subunit D [Vitreoscilla sp. C1] Length = 103 Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 2/103 (1%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + N H G+ KQ +VGFI+S+ILT+IPFG+VM G + K I T+V+ AQ+ V LVF Sbjct: 3 SHNNHDAGSVKQYVVGFIISIILTVIPFGMVMGG--MPKGITVATLVITMFAQVWVQLVF 60 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 FLHM + W I + +T + +AI FVGS+W++ L++ MM Sbjct: 61 FLHMKREDAQRWHIASFWYTFLTIAILFVGSVWILSELHSFMM 103 >gi|308070783|ref|YP_003872388.1| Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Paenibacillus polymyxa E681] gi|305860062|gb|ADM71850.1| Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Paenibacillus polymyxa E681] Length = 111 Score = 94.1 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 2/97 (2%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H + S+G+ K ++GFILS++LTIIP G+VM L + + I+ A+ Q +V L Sbjct: 10 SHGHDD-SHGSVKSYVIGFILSIVLTIIPLGVVMNH-MLSRTSTMVVILAAAVLQFLVQL 67 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 FF+H+ W++M +IF ++++ GS+W+M Sbjct: 68 FFFMHIRESNGPRWNVMTLIFGVVILLTVVGGSVWIM 104 >gi|312964549|ref|ZP_07778805.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 2362-75] gi|312290783|gb|EFR18660.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 2362-75] gi|323191347|gb|EFZ76610.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli RN587/1] gi|330910221|gb|EGH38731.1| cytochrome O ubiquinol oxidase subunit 4 [Escherichia coli AA86] Length = 91 Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 46/90 (51%), Positives = 69/90 (76%), Gaps = 1/90 (1%) Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80 + GFILS+ILT+IPF +VM G ++ TI+ A+ QI+VHLV FLHM+TK ++GW+ Sbjct: 1 MTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQILVHLVCFLHMNTKSDEGWN 59 Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + A +FT++++AI VGS+W+M++LN NMM Sbjct: 60 MTAFVFTVLIIAILVVGSIWIMWNLNYNMM 89 >gi|301025684|ref|ZP_07189200.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 196-1] gi|312970524|ref|ZP_07784705.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 1827-70] gi|299879996|gb|EFI88207.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS 196-1] gi|310337173|gb|EFQ02311.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 1827-70] gi|315616631|gb|EFU97248.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 3431] gi|320181589|gb|EFW56504.1| Cytochrome O ubiquinol oxidase subunit IV [Shigella boydii ATCC 9905] gi|320197133|gb|EFW71750.1| Cytochrome O ubiquinol oxidase subunit IV [Escherichia coli WV_060327] gi|320201673|gb|EFW76249.1| Cytochrome O ubiquinol oxidase subunit IV [Escherichia coli EC4100B] gi|323157117|gb|EFZ43241.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli EPECa14] gi|323160461|gb|EFZ46409.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli E128010] gi|323164228|gb|EFZ50035.1| cytochrome o ubiquinol oxidase subunit IV [Shigella sonnei 53G] gi|323170514|gb|EFZ56164.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli LT-68] gi|323178303|gb|EFZ63881.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 1180] gi|325498280|gb|EGC96139.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia fergusonii ECD227] gi|332085679|gb|EGI90843.1| cytochrome o ubiquinol oxidase subunit IV [Shigella dysenteriae 155-74] gi|332098563|gb|EGJ03529.1| cytochrome o ubiquinol oxidase subunit IV [Shigella boydii 3594-74] gi|332760715|gb|EGJ91003.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 4343-70] gi|332761669|gb|EGJ91948.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2747-71] gi|332763720|gb|EGJ93958.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri K-671] gi|332768345|gb|EGJ98529.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2930-71] gi|333007851|gb|EGK27327.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri K-218] gi|333010886|gb|EGK30312.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri K-272] gi|333021384|gb|EGK40637.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri K-227] gi|333021987|gb|EGK41233.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri K-304] Length = 91 Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 45/90 (50%), Positives = 69/90 (76%), Gaps = 1/90 (1%) Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80 + GFILS+ILT+IPF +VM G ++ TI+ A+ Q++VHLV FLHM+TK ++GW+ Sbjct: 1 MTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQVLVHLVCFLHMNTKSDEGWN 59 Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + A +FT++++AI VGS+W+M++LN NMM Sbjct: 60 MTAFVFTVLIIAILVVGSIWIMWNLNYNMM 89 >gi|319945343|ref|ZP_08019605.1| cytochrome o ubiquinol oxidase subunit IV [Lautropia mirabilis ATCC 51599] gi|319741913|gb|EFV94338.1| cytochrome o ubiquinol oxidase subunit IV [Lautropia mirabilis ATCC 51599] Length = 105 Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 41/103 (39%), Positives = 67/103 (65%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M + + C +GF+L++ILT+IPFG+VM G F D L I+ + QIIVH+V+F Sbjct: 1 MGQPPHVSGTDCNIGFLLAVILTLIPFGLVMTGAFEDTGTAALIIMGLGVVQIIVHMVYF 60 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 L ++ + E W++ A+I T+++VAI VG++W M L+ N++ Sbjct: 61 LQLNCRAEGSWTLPALIVTVLLVAILLVGTLWGMPPLDGNVVP 103 >gi|310644019|ref|YP_003948777.1| cytochrome o ubiquinol oxidase subunit iv [Paenibacillus polymyxa SC2] gi|309248969|gb|ADO58536.1| Cytochrome o ubiquinol oxidase subunit IV [Paenibacillus polymyxa SC2] Length = 111 Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 2/97 (2%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H + S+G+ K ++GFILS++LTIIP +VM L + + I+ A+ Q +V L Sbjct: 10 SHGHDD-SHGSVKSYVIGFILSIVLTIIPLFVVMNH-MLSRTSTMVVILAAAVLQFLVQL 67 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 FF+H+ W++M +IF ++++ GS+W+M Sbjct: 68 FFFMHIRESNGPRWNVMTLIFGVVILLTVVGGSVWIM 104 >gi|320186058|gb|EFW60803.1| Cytochrome O ubiquinol oxidase subunit IV [Shigella flexneri CDC 796-83] Length = 91 Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 44/90 (48%), Positives = 68/90 (75%), Gaps = 1/90 (1%) Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80 + GFILS+ILT+IPF +VM G ++ TI+ A+ Q++VHLV FLHM+TK ++GW+ Sbjct: 1 MTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQVLVHLVCFLHMNTKSDEGWN 59 Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + A +FT++++ I VGS+W+M++LN NMM Sbjct: 60 MTAFVFTVLIITILVVGSIWIMWNLNYNMM 89 >gi|240849796|ref|YP_002971184.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella grahamii as4aup] gi|240266919|gb|ACS50507.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella grahamii as4aup] Length = 182 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%) Query: 8 NMNMHSYG-TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIM--CLTIVLCAIAQIIVH 64 +M ++G + LVGFIL++ T+ F VM G + ++ AI QIIV Sbjct: 2 SMQNETHGPSTGSYLVGFILAVFFTLGSFVPVMYGMMESWAVSTKVAYLLGMAIIQIIVQ 61 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +VFFLH+++ + W++ A+ F I V + G+ W + HLN NMM Sbjct: 62 IVFFLHLNSGPDAKWNLSALWFAAICVFVIIGGTWWAISHLNYNMM 107 >gi|319778050|ref|YP_004134480.1| cytochrome o ubiquinol oxidase subunit iv [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171769|gb|ADV15306.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 136 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 1/98 (1%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74 G ++G+ L+++LTI F + + + +V+ A+AQ+ VHLVFFLH++T Sbjct: 31 GGLLGYVIGYGLAILLTIASFLAAQTD-LIYQPAVISALVVLAVAQMGVHLVFFLHLTTG 89 Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112 ++ +I+A+ F +++VA+ +GS+W+M HLN NM +M Sbjct: 90 PDNTNNILALAFGVLIVALVVLGSVWIMAHLNENMAAM 127 >gi|251794161|ref|YP_003008892.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus sp. JDR-2] gi|247541787|gb|ACS98805.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus sp. JDR-2] Length = 110 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 64/100 (64%), Gaps = 2/100 (2%) Query: 4 DNIHNMNMH-SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + H + H S+G+ K ++GF++S++LTI+P +V+ +DK + I++ A+ Q + Sbjct: 6 THGHGHDEHESHGSMKSYVIGFVISIVLTILPLVVVLND-MMDKTPTLIFILIMAVLQFV 64 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 V L FF+H+ + + +++MA+IF ++++ GS+W+M Sbjct: 65 VQLFFFMHLREEKKPRYNVMALIFGLVILVTIIAGSIWIM 104 >gi|293607262|ref|ZP_06689603.1| cytochrome o ubiquinol oxidase subunit IV [Achromobacter piechaudii ATCC 43553] gi|292814354|gb|EFF73494.1| cytochrome o ubiquinol oxidase subunit IV [Achromobacter piechaudii ATCC 43553] Length = 116 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + H+ + +G+ K ++GF+LSL+LT FG+VM G I + +V + Q++V Sbjct: 9 HGHDDHAADHGSLKSYIIGFVLSLLLTFGSFGLVMHGAL-SHTITIIGVVALCVLQLLVQ 67 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LV+FLHM + E ++ A +FT++++AI GS WV+Y++N NM Sbjct: 68 LVYFLHMGSSKESRDNLSAFVFTVLIIAIIVGGSAWVLYNMNVNM 112 >gi|294143095|ref|YP_003559073.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella violacea DSS12] gi|7657998|dbj|BAA94867.1| quinol oxidase subunit V [Shewanella violacea] gi|293329564|dbj|BAJ04295.1| cytochrome o ubiquinol oxidase, subunit IV [Shewanella violacea DSS12] Length = 111 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 1/109 (0%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 + + + + K LVGF+LS+ILT IPF VM F K I +++ A+ QI Sbjct: 4 AHTSESLTSDDFMASVKSYLVGFLLSVILTGIPFWAVMTHHFE-KPITLGLVLVMAVVQI 62 Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +VHL +FLH+ E + + +FT +++ + S+W++Y N MM Sbjct: 63 VVHLKYFLHLDFSKEGKINTFSFLFTALIMVMVMGLSVWIIYAANALMM 111 >gi|15596517|ref|NP_250011.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa PAO1] gi|107100771|ref|ZP_01364689.1| hypothetical protein PaerPA_01001799 [Pseudomonas aeruginosa PACS2] gi|116049272|ref|YP_791925.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa UCBPP-PA14] gi|152984607|ref|YP_001349424.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa PA7] gi|218892575|ref|YP_002441444.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa LESB58] gi|254239692|ref|ZP_04933014.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa 2192] gi|296390303|ref|ZP_06879778.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa PAb1] gi|81541485|sp|Q9I424|CYOD_PSEAE RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD; AltName: Full=Cytochrome o ubiquinol oxidase subunit IV gi|9947258|gb|AAG04709.1|AE004561_5 cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa PAO1] gi|115584493|gb|ABJ10508.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa UCBPP-PA14] gi|126193070|gb|EAZ57133.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa 2192] gi|150959765|gb|ABR81790.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa PA7] gi|218772803|emb|CAW28588.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa LESB58] Length = 111 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 1/108 (0%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H+ + +G+ +GF+LS+ILT IPF +VM G F ++ LT+V+ + Q++VHL Sbjct: 5 AHDNHGAGHGSLGSYAIGFVLSVILTAIPFYMVMDGGF-SRHATILTMVVLGLVQVVVHL 63 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113 + FLHM+ E W++MA IFT+I++ + S+W+++ + MM M Sbjct: 64 ICFLHMNMSSEGRWNVMAFIFTVIVILLVVGLSLWIIFSADMLMMPMP 111 >gi|121602245|ref|YP_989521.1| cytochrome o ubiquinol oxidase, subunit IV [Bartonella bacilliformis KC583] gi|120614422|gb|ABM45023.1| cytochrome o ubiquinol oxidase, subunit IV [Bartonella bacilliformis KC583] Length = 123 Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 8/111 (7%) Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIA 59 +++ H+ + + LVGF+L++I T F VM G I I + AI Sbjct: 3 EHNETHDP------SIRSYLVGFVLAVIFTFCSFIPVMYGMLEGWAISTKVIYLIGMAII 56 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 QIIV ++FFLH+++ + W+ +A+ F + V I G+ W + HLN NMM Sbjct: 57 QIIVQIIFFLHLNSGPDAKWNFVALWFAVTCVTIIIGGTWWAISHLNYNMM 107 >gi|260459333|ref|ZP_05807588.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium opportunistum WSM2075] gi|259034887|gb|EEW36143.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium opportunistum WSM2075] Length = 136 Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 1/98 (1%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74 G ++G+ L+++LTI F + + + +V+ A+AQ+ VHLVFFLH++T Sbjct: 31 GGLLGYVIGYGLAILLTIASFLAAQTD-LIYQPAVISALVVLAVAQMGVHLVFFLHLTTG 89 Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112 ++ +I+A+ F +++VA+ +GS+W+M HLN NM +M Sbjct: 90 PDNTNNILALAFGVLIVALVVLGSVWIMAHLNENMAAM 127 >gi|323529725|ref|YP_004231877.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. CCGE1001] gi|323386727|gb|ADX58817.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. CCGE1001] Length = 110 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 ++G+ + + GF+LS+ LT F +VM+G F + M V A QI+VHL FF Sbjct: 8 SADSNHGSVRGYVCGFVLSVALTAAAFWLVMRGAFPAQTAMIALSV-LAFVQIVVHLAFF 66 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 LH+ W++MA+ +T + G++WVM++++ NMMS Sbjct: 67 LHVDMSARQRWNVMALAYTALAALFLIGGTVWVMHNVSMNMMS 109 >gi|239906128|ref|YP_002952867.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio magneticus RS-1] gi|239795992|dbj|BAH74981.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio magneticus RS-1] Length = 107 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 2/109 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + N GT K +GF S++LT++ FG+VM G + + L + A+ Q Sbjct: 1 MSHSPTDNAGAAV-GTVKSYALGFAASVVLTLVSFGLVMGGAL-PRLPLILALFALAVIQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 + V L +FLH+ W++MA++FT ++ + GS+W+MY L+ M Sbjct: 59 LFVQLRYFLHVDRSSAMYWNLMALLFTFFLMFLFIGGSIWIMYGLHERM 107 >gi|300690265|ref|YP_003751260.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia solanacearum PSI07] gi|299077325|emb|CBJ49951.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia solanacearum PSI07] Length = 121 Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 39/90 (43%), Positives = 65/90 (72%), Gaps = 1/90 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VHL++FLH+ Sbjct: 26 TVKGYLIGFVLAVILTVIPFKMVMGGGFSHGTVLV-TVMALAVVQIVVHLIYFLHLDGSS 84 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 W++MA +FT++++AI VGS+WVM+++ Sbjct: 85 SQRWNVMAFLFTLLILAIVIVGSLWVMHNM 114 >gi|187477294|ref|YP_785318.1| cytochrome O ubiquinol oxidase subunit IV [Bordetella avium 197N] gi|115421880|emb|CAJ48399.1| cytochrome O ubiquinol oxidase subunit IV [Bordetella avium 197N] Length = 113 Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M + +G+ K ++GFILS+ILT+ F +VM G F + ++ I++ + Q Sbjct: 1 MSAHHDAAHADGGHGSLKSYIIGFILSIILTLGSFWLVMNGTF-SRPLVLGGILVLCVVQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 ++V LVFF+HM T + ++ A +FT++++AI GS+WV++++N NM+ Sbjct: 60 LLVQLVFFMHMGTAKSEQDNLSAFLFTVMIIAIIVGGSIWVLHNMNANML 109 >gi|170692897|ref|ZP_02884059.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia graminis C4D1M] gi|170142553|gb|EDT10719.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia graminis C4D1M] Length = 110 Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 1/103 (0%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 +G+ + L GF+LS++LT F +VM G F + M + + A QI+VHLVFF Sbjct: 8 SADQGHGSLRGYLAGFVLSVVLTAAAFWLVMHGAFPAQTAMIA-LSVLAFVQIVVHLVFF 66 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 LH+ W++MA+ +T + G++WVM++++ NMMS Sbjct: 67 LHIDMSAGQRWNVMALAYTALAALFLIGGTVWVMHNVSMNMMS 109 >gi|295701244|ref|YP_003610245.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. CCGE1002] gi|295441567|gb|ADG20734.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. CCGE1002] Length = 108 Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 1/101 (0%) Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70 S+G+ + L GF LS++LT FG+ + D + I + Q++VHLV FLH Sbjct: 8 AGSHGSLTRYLAGFFLSVLLTAGAFGVGLYDAI-DATTAMIAIAVLGFLQVVVHLVCFLH 66 Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 ++ GW+++++ +TI+ A +G++WVM ++ MMS Sbjct: 67 LTLSPGQGWNVLSLCYTILAAAFLILGTVWVMRNVEMLMMS 107 >gi|319405035|emb|CBI78645.1| cytochrome o ubiquinol oxidase subunit IV (fragment) [Bartonella sp. AR 15-3] Length = 135 Score = 90.6 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 2/97 (2%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQIIVHLVFFLHMST 73 LVGFILS++ T+ F VM G I I + A+ QII+ +VFFLH+S+ Sbjct: 11 GIGSYLVGFILSVLFTLGSFIPVMYGLLDSWAISTKVIYLIGMALIQIIIQIVFFLHLSS 70 Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + W++ A++F + V I G+ W + HLN NMM Sbjct: 71 GPDAKWNLAALLFAAMCVFIIIGGTWWAISHLNYNMM 107 >gi|307725994|ref|YP_003909207.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. CCGE1003] gi|307586519|gb|ADN59916.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. CCGE1003] Length = 110 Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 +G+ + GF+LS++LT F +VM+G + M + + A QI+VHLVFF Sbjct: 8 SAESGHGSTGGYVCGFVLSVVLTAAAFWLVMRGALPAQTAMIA-LSVLAFVQIVVHLVFF 66 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 LH+ W++MA+ +T + G++WVM++++ NMMS Sbjct: 67 LHIDMSAGQRWNVMALAYTALAALFLIGGTVWVMHNVSMNMMS 109 >gi|317403853|gb|EFV84327.1| cytochrome o ubiquinol oxidase subunit IV [Achromobacter xylosoxidans C54] Length = 116 Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 1/105 (0%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + H+ + +G+ K ++GF+LSL+LT FG+VM G I + +V + Q++V Sbjct: 9 HGHDDHAADHGSLKSYIIGFVLSLLLTFGSFGLVMSGAL-SHTITIIGVVALCVLQLLVQ 67 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LV+FLHM ++ +FT++++AI GS WV+Y++N NM Sbjct: 68 LVYFLHMGASKSARDNLATFVFTVMIIAIIVGGSAWVLYNMNVNM 112 >gi|313106309|ref|ZP_07792553.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa 39016] gi|310879055|gb|EFQ37649.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa 39016] Length = 111 Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H+ + +G+ +GF+LS+ILT IPF +VM G F ++ LT+V+ + Q++VHL Sbjct: 5 AHDNHGAGHGSLGSYAIGFVLSVILTAIPFYMVMDGGF-SRHATILTMVVLGLVQVVVHL 63 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113 + FLHM+ E W++MA IF +I++ + S+W+++ + MM M Sbjct: 64 ICFLHMNMSSEGRWNVMAFIFMVIVILLVVGLSLWIIFSADMLMMPMP 111 >gi|33519707|ref|NP_878539.1| cytochrome O ubiquinol oxidase subunit CyoD [Candidatus Blochmannia floridanus] gi|33504052|emb|CAD83313.1| cytochrome O ubiquinol oxidase subunit CyoD [Candidatus Blochmannia floridanus] Length = 100 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 1/95 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K +GFILSLI TIIPF I+ F + + ++ CAI QI +HL++FLH++ Sbjct: 7 IKHYCIGFILSLIFTIIPFYIIQHNCFE-QQTSYIIVIFCAITQIYIHLIYFLHLNQISN 65 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 W+++++IFT +V I GS+W+M HL++N+MS Sbjct: 66 QMWNVISLIFTTFIVLILITGSIWIMTHLHHNLMS 100 >gi|311108452|ref|YP_003981305.1| cytochrome O ubiquinol oxidase subunit IV 1 [Achromobacter xylosoxidans A8] gi|310763141|gb|ADP18590.1| cytochrome O ubiquinol oxidase subunit IV 1 [Achromobacter xylosoxidans A8] Length = 116 Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 1/105 (0%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + H+ + +G+ K ++GF+LSL+LT FG+VM G I + +V + Q++V Sbjct: 9 HGHDDHAADHGSLKSYIIGFVLSLLLTFGSFGLVMNGGL-SHTITIIGVVALCVLQLLVQ 67 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LV+FLHM ++ +FT+++++I GS WV+Y++N NM Sbjct: 68 LVYFLHMGASKSARDNLATFVFTLMIISIIVGGSAWVLYNMNVNM 112 >gi|226310782|ref|YP_002770676.1| quinol oxidase polypeptide IV [Brevibacillus brevis NBRC 100599] gi|226093730|dbj|BAH42172.1| quinol oxidase polypeptide IV [Brevibacillus brevis NBRC 100599] Length = 105 Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 2/102 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M H + HS+G+ K+ ++GFILS++LTIIP +VM L K + I++ A+ Q Sbjct: 1 MAQHQNHGGH-HSHGSMKEYVIGFILSIVLTIIPLVLVMN-SILSKTATMIAILVMAVLQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 ++ LVFF+H+ + +++ +I +++V GS+W+M Sbjct: 59 FVIQLVFFMHIREGEKPRYNVQTLILGLVIVITIVAGSLWIM 100 >gi|57340142|gb|AAW50058.1| hypothetical protein FTT0284 [synthetic construct] Length = 145 Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 71/117 (60%), Gaps = 2/117 (1%) Query: 1 MKYDNIHNMN-MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M +++++ + +YGT K + GF+LS+++T I F +V +C+T+ + A+ Sbjct: 27 MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSP-VALCVTVAVLAVV 85 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 Q+ V LVFFLH+ST + W++++ IF II+V I G+MW+M+ L + MM + Sbjct: 86 QLFVQLVFFLHLSTDSKARWNLVSAIFAIIVVVIVVAGTMWIMFDLYDMMMYPYDVP 142 >gi|110635861|ref|YP_676069.1| cytochrome C oxidase subunit IV [Mesorhizobium sp. BNC1] gi|110286845|gb|ABG64904.1| cytochrome bo3 quinol oxidase subunit 4 [Chelativorans sp. BNC1] Length = 103 Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + Q L GF+L+L+LT IPF IV G + + + A+ Q+ VHL +FLHM+ Sbjct: 10 SLTQYLTGFVLALVLTAIPFAIVATGAA-PRAQSLAVVTVAAVVQVFVHLWYFLHMNFST 68 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 +I+A F I++ I GS W+M+ L++ M Sbjct: 69 TPRENILAFAFAAILILIMLGGSFWIMFDLHSRM 102 >gi|209363942|ref|YP_002268300.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii Dugway 5J108-111] gi|212212544|ref|YP_002303480.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii CbuG_Q212] gi|212218407|ref|YP_002305194.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii CbuK_Q154] gi|215919090|ref|YP_002332979.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii RSA 493] gi|206583975|gb|ACI15270.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii RSA 493] gi|207081875|gb|ACI23138.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii Dugway 5J108-111] gi|212010954|gb|ACJ18335.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii CbuG_Q212] gi|212012669|gb|ACJ20049.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii CbuK_Q154] Length = 111 Score = 87.5 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 6/107 (5%) Query: 9 MNMHSYGTKKQ----CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 ++ SYGT K+ +VG IL +ILT++ F VM F + I + A+ Q IV Sbjct: 5 LSEESYGTGKKKLSIYIVGMILCVILTLVSFMTVMYSAFPP-TTLVAIIFVSALIQFIVQ 63 Query: 65 LVFFLHMSTKVED-GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +V FL ++ K E ++M+ IFTI+++ + GS+W+M+ L+ MM Sbjct: 64 VVCFLRLNAKNEQSRMNLMSFIFTIVILFVLIGGSLWIMWSLHYRMM 110 >gi|146339413|ref|YP_001204461.1| cytochrome O ubiquinol oxidase protein subunit IV [Bradyrhizobium sp. ORS278] gi|146192219|emb|CAL76224.1| Cytochrome O ubiquinol oxidase protein subunit IV [Bradyrhizobium sp. ORS278] Length = 135 Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%) Query: 31 TIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIM 90 T F I +I IV AIAQ+ VHLVFFLH++T ++ +++A+ F +I+ Sbjct: 47 TATSFFIAGTHLVWRPSIPVALIV-LAIAQMGVHLVFFLHITTGPDNTNNVLALAFGLII 105 Query: 91 VAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 V + GS+W+M +LN+NMM M + + Sbjct: 106 VVLVVGGSLWIMANLNHNMMPMTQLMQMQ 134 >gi|329296774|ref|ZP_08254110.1| Cytochrome o ubiquinol oxidase protein cyoD [Plautia stali symbiont] Length = 91 Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 39/91 (42%), Positives = 67/91 (73%), Gaps = 1/91 (1%) Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80 ++GFILS+ILT IPF +VM G I+ + +V + ++VHLV+FLH+ +K E GW+ Sbjct: 1 MIGFILSIILTAIPFWMVMDGSASHGTILGVVLVCAVVQ-VLVHLVYFLHLDSKSEGGWN 59 Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 ++A++F+ +++ I +GS+W+M++LN NMM+ Sbjct: 60 MVAIVFSAVIILIVVIGSLWIMWNLNYNMMA 90 >gi|238791422|ref|ZP_04635060.1| hypothetical protein yinte0001_25730 [Yersinia intermedia ATCC 29909] gi|238729038|gb|EEQ20554.1| hypothetical protein yinte0001_25730 [Yersinia intermedia ATCC 29909] Length = 84 Score = 85.2 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 1/82 (1%) Query: 29 ILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTI 88 ILT+IPF +VM G + T+V A+ QIIVHLV+FLHM+ E+ W+++A +FT Sbjct: 2 ILTVIPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGSSEERWNLVAFLFTA 60 Query: 89 IMVAICFVGSMWVMYHLNNNMM 110 +++AI VGS+W+MY+LN NMM Sbjct: 61 MIIAIVVVGSLWIMYNLNINMM 82 >gi|149189685|ref|ZP_01867967.1| hypothetical protein VSAK1_06650 [Vibrio shilonii AK1] gi|148836497|gb|EDL53452.1| hypothetical protein VSAK1_06650 [Vibrio shilonii AK1] Length = 103 Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 2/88 (2%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK-VED 77 + GF +L+LT++PF +V + + CAI Q+ VH +FLHM K + Sbjct: 11 DYIKGFCAALVLTVVPFYLVWAQSL-PASTTYFVLFACAIVQVFVHFKYFLHMEAKTSDG 69 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHL 105 W++++++FTI++V I GS+W+MY++ Sbjct: 70 QWNLVSLLFTIVVVFILIAGSLWIMYNM 97 >gi|209808983|ref|YP_002264521.1| cytochrome o ubiquinol oxidase subunit CyoD [Aliivibrio salmonicida LFI1238] gi|208010545|emb|CAQ80914.1| cytochrome o ubiquinol oxidase subunit CyoD [Aliivibrio salmonicida LFI1238] Length = 109 Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%) Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77 K + GFI SLILT+IPF G + + + ++L AIAQ++VHL +FLHM + + Sbjct: 17 KGYITGFIASLILTMIPFYFAYTGVL-SREVTIVVLILSAIAQLVVHLFYFLHMDSTEKG 75 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHL 105 +++++ +FT ++V I GS+W+M++L Sbjct: 76 RFNMLSFVFTAVIVFIVIAGSIWIMWNL 103 >gi|49473795|ref|YP_031837.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella quintana str. Toulouse] gi|49239298|emb|CAF25624.1| Cytochrome o ubiquinol oxidase subunit IV [Bartonella quintana str. Toulouse] Length = 168 Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%) Query: 8 NMNMHSY-GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIM--CLTIVLCAIAQIIVH 64 +M+ ++ + VGFIL++ T+ F VM G I ++ AI QIIV Sbjct: 2 SMHNETHIPSTSSYFVGFILAVFFTLGSFIPVMYGMMESWAISTKVAYLIGMAIIQIIVQ 61 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 +VFFLH++ + W++ A+ F I V + G+ W + HLN NMM Sbjct: 62 IVFFLHLNAGPDAKWNLSALWFAAICVFVIIGGTWWAISHLNYNMM 107 >gi|21623361|gb|AAM67996.1| cytochrome o ubiquinol oxidase D [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 123 Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 38/91 (41%), Positives = 63/91 (69%), Gaps = 1/91 (1%) Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77 K +VGF+ SL LTIIPF + F + I I+LCA++QII+H ++FLH+ ++ Sbjct: 31 KSYIVGFLFSLFLTIIPFFCTLNHLF-SRKINFFVILLCALSQIIIHFIYFLHLDFSKKN 89 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 W+I++++F +I+V I GS+W+MY+LN++ Sbjct: 90 SWNIISLLFILIIVFIIVFGSIWIMYNLNHH 120 >gi|114330709|ref|YP_746931.1| cytochrome C oxidase subunit IV [Nitrosomonas eutropha C91] gi|114307723|gb|ABI58966.1| cytochrome bo3 quinol oxidase subunit 4 [Nitrosomonas eutropha C91] Length = 116 Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 2/94 (2%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 + GF L+L LT++PF +V ++ + +TI + A+ Q +VH +FLH+ K + Sbjct: 25 SYMWGFGLALGLTLVPFALVQWQAMA-RDPLLITIAVLALVQTVVHFRYFLHLDRKRK-R 82 Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112 ++ ++F+ ++ I G++W+M +L M + Sbjct: 83 EDLLLVLFSTSLLIIMVAGTIWIMANLAERMTPI 116 >gi|260430480|ref|ZP_05784453.1| cytOchrome o ubiquinol oxidase subunit IV [Citreicella sp. SE45] gi|260418509|gb|EEX11766.1| cytOchrome o ubiquinol oxidase subunit IV [Citreicella sp. SE45] Length = 99 Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 1/92 (1%) Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77 + LVGF L+L LT++PF +V G + + +TI + A+AQI VHL FFLH+ + Sbjct: 9 RMYLVGFGLALTLTLVPFALVHWGLMQGR-TLAITIAVLAVAQIAVHLRFFLHIDLSRQK 67 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 + ++FT++++AI G++W+M +L M Sbjct: 68 REDLQLILFTVLLLAIMAFGTLWIMGNLATRM 99 >gi|226314759|ref|YP_002774655.1| quinol oxidase polypeptide IV [Brevibacillus brevis NBRC 100599] gi|226097709|dbj|BAH46151.1| probable quinol oxidase polypeptide IV [Brevibacillus brevis NBRC 100599] Length = 105 Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 58/98 (59%), Gaps = 1/98 (1%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 + +G+ K ++GF+LSLI TIIP + ++ +LD + + + A+ Q IV Sbjct: 2 HGTTEQHGGHGSLKSYVIGFVLSLIFTIIP-ILALENGWLDSDKRLIIYLGAALFQFIVQ 60 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 L FF+H+ + + +++M+++ + +V + +GS+W+M Sbjct: 61 LFFFMHLKEEDKPRYNLMSLLLGLFIVFLIVIGSIWIM 98 >gi|54296268|ref|YP_122637.1| cytochrome o ubiquinol oxidase subunit IV [Legionella pneumophila str. Paris] gi|53750053|emb|CAH11445.1| Cytochrome o ubiquinol oxidase subunit IV [Legionella pneumophila str. Paris] Length = 112 Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 9/114 (7%) Query: 1 MKYDNIHNMNMHSYGTKKQ----CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLC 56 M++ H + YGT ++ LVGFI LT+ F +VM F K + I Sbjct: 1 MEH---HGIKEPDYGTGQKKLGLYLVGFISCTFLTLFSFWVVMSHIF-SKTEVLTLIFSS 56 Query: 57 AIAQIIVHLVFFLHMSTKVED-GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 A Q +V ++ FL +ST+ + ++M +FT +++ +GS+W+M++LN M Sbjct: 57 ACIQFLVQVICFLRLSTQTQQGRTNVMTFLFTGVILTSIILGSLWIMWNLNYYM 110 >gi|30410824|ref|NP_660785.2| cytochrome O ubiquinol oxidase D [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008334|sp|Q8K996|CYOD_BUCAP RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD Length = 108 Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 38/91 (41%), Positives = 63/91 (69%), Gaps = 1/91 (1%) Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77 K +VGF+ SL LTIIPF + F + I I+LCA++QII+H ++FLH+ ++ Sbjct: 16 KSYIVGFLFSLFLTIIPFFCTLNHLF-SRKINFFVILLCALSQIIIHFIYFLHLDFSKKN 74 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 W+I++++F +I+V I GS+W+MY+LN++ Sbjct: 75 SWNIISLLFILIIVFIIVFGSIWIMYNLNHH 105 >gi|328675366|gb|AEB28041.1| Cytochrome O ubiquinol oxidase subunit IV [Francisella cf. novicida 3523] Length = 110 Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 70/111 (63%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMN-MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M +++++ + +YGT K + GF+LS+++T I F +V +C+T+ + A+ Sbjct: 1 MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFALVGFKLLSP-VALCVTVAVLAVV 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q+ V LVFFLH+ST + W++++ IF II+V I G+MW+M+ L + MM Sbjct: 60 QLFVQLVFFLHLSTDSKARWNLVSAIFAIIVVIIVVAGTMWIMFDLYDMMM 110 >gi|319760377|ref|YP_004124315.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Blochmannia vafer str. BVAF] gi|318039091|gb|ADV33641.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Blochmannia vafer str. BVAF] Length = 100 Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 1/95 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + +GF+LSLILTIIPF + F DK I+ + + CA+ QI +HLV+FLH+ Sbjct: 6 SNTSYFIGFVLSLILTIIPFYTIQYNIF-DKKILLIITISCALIQIYIHLVYFLHLIHIS 64 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + W I ++IFTI +V I +GS+W+M HL++N+M Sbjct: 65 DRKWIITSLIFTIFIVFILVLGSVWIMTHLHHNLM 99 >gi|162147816|ref|YP_001602277.1| cytochrome o ubiquinol oxidase protein cyoD [Gluconacetobacter diazotrophicus PAl 5] gi|209542439|ref|YP_002274668.1| cytochrome o ubiquinol oxidase subunit IV [Gluconacetobacter diazotrophicus PAl 5] gi|161786393|emb|CAP55975.1| putative cytochrome o ubiquinol oxidase protein cyoD [Gluconacetobacter diazotrophicus PAl 5] gi|209530116|gb|ACI50053.1| cytochrome o ubiquinol oxidase subunit IV [Gluconacetobacter diazotrophicus PAl 5] Length = 110 Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%) Query: 20 CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGW 79 L GF++S++LT FG+VM F I + A Q++VHLVFFLHM+T E W Sbjct: 19 YLTGFVISVVLTAAAFGVVMAHSFSPSG-TIAAIAILAAVQVVVHLVFFLHMNTSSEQRW 77 Query: 80 SIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 ++MA +FT+ V I VG++++M+ NMMS Sbjct: 78 NVMAFVFTVTAVLILIVGTVFIMHDTAINMMS 109 >gi|157694209|ref|YP_001488671.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus pumilus SAFR-032] gi|157682967|gb|ABV64111.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus pumilus SAFR-032] Length = 126 Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 2/97 (2%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H+ H + K +VGFILS++LT++ F I + G + + I A Q + L Sbjct: 5 THSSAEHEHFPWK-HVVGFILSIVLTVLAFWIAI-GAEIGSSAKLWIIFGFAFIQAFLQL 62 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 F+HM+ + +F + I +GS+W+ Sbjct: 63 FMFMHMTESENGTVQVGNTLFGLFCAIIFVIGSVWIF 99 >gi|304407875|ref|ZP_07389526.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus curdlanolyticus YK9] gi|304343358|gb|EFM09201.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus curdlanolyticus YK9] Length = 109 Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 1/87 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K ++GFI+S++LTIIP +VM + KN + I++ A+ Q V L FF+H+ Sbjct: 17 SLKSYVIGFIMSIVLTIIPLVVVMND-MMSKNGTIVLILILAVLQFAVQLWFFMHLKEGE 75 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVM 102 W+I A++F I+++ + GS+W+M Sbjct: 76 NAKWNIAALLFAILILVVVVAGSIWIM 102 >gi|71892023|ref|YP_277753.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796129|gb|AAZ40880.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 100 Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 67/95 (70%), Gaps = 1/95 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T+K L+GF+LSL+LTI+PF +V K ++ + + C+I QII+HL+FFLH+ Sbjct: 6 TQKSYLIGFVLSLVLTIVPFFMVTHDTINKKILINIIVF-CSIMQIIIHLIFFLHLGNVS 64 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 W+++++IFTI +V I +GS+W+M HL++N+M Sbjct: 65 NQAWNLISLIFTIFIVFILVLGSVWIMTHLHHNLM 99 >gi|254368561|ref|ZP_04984577.1| hypothetical protein FTAG_01545 [Francisella tularensis subsp. holarctica FSC022] gi|157121464|gb|EDO65655.1| hypothetical protein FTAG_01545 [Francisella tularensis subsp. holarctica FSC022] Length = 110 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 70/111 (63%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMN-MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M +++++ + +YGT K + GF+LS+++T I F +V +C+T+ + A+ Sbjct: 1 MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSP-VALCVTVAVLAVV 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q+ V LVFFLH+ST + W++++ IF I++V I G+MW+M+ L + MM Sbjct: 60 QLFVQLVFFLHLSTDSKARWNLVSAIFAIVVVVIVVAGTMWIMFDLYDMMM 110 >gi|56707438|ref|YP_169334.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis subsp. tularensis SCHU S4] gi|110669909|ref|YP_666466.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis subsp. tularensis FSC198] gi|118496812|ref|YP_897862.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis subsp. novicida U112] gi|134302622|ref|YP_001122593.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis subsp. tularensis WY96-3418] gi|187932181|ref|YP_001892166.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis subsp. mediasiatica FSC147] gi|194324507|ref|ZP_03058279.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis subsp. novicida FTE] gi|208780573|ref|ZP_03247912.1| cytochrome o ubiquinol oxidase subunit IV [Francisella novicida FTG] gi|224456518|ref|ZP_03664991.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis subsp. tularensis MA00-2987] gi|254370869|ref|ZP_04986874.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis subsp. tularensis FSC033] gi|254372176|ref|ZP_04987668.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis subsp. novicida GA99-3549] gi|254373657|ref|ZP_04989141.1| cytochrome O ubiquinol oxidase subunit IV [Francisella novicida GA99-3548] gi|254874275|ref|ZP_05246985.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis subsp. tularensis MA00-2987] gi|54113735|gb|AAV29501.1| NT02FT0909 [synthetic construct] gi|56603930|emb|CAG44917.1| Cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis subsp. tularensis SCHU S4] gi|110320242|emb|CAL08300.1| Cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis subsp. tularensis FSC198] gi|118422718|gb|ABK89108.1| cytochrome bo terminal oxidase subunit IV [Francisella novicida U112] gi|134050399|gb|ABO47470.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis subsp. tularensis WY96-3418] gi|151569112|gb|EDN34766.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis subsp. tularensis FSC033] gi|151569906|gb|EDN35560.1| cytochrome O ubiquinol oxidase subunit IV [Francisella novicida GA99-3549] gi|151571379|gb|EDN37033.1| cytochrome O ubiquinol oxidase subunit IV [Francisella novicida GA99-3548] gi|187713090|gb|ACD31387.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis subsp. mediasiatica FSC147] gi|194321342|gb|EDX18828.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis subsp. novicida FTE] gi|208743548|gb|EDZ89853.1| cytochrome o ubiquinol oxidase subunit IV [Francisella novicida FTG] gi|254840274|gb|EET18710.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis subsp. tularensis MA00-2987] gi|282158580|gb|ADA77971.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis subsp. tularensis NE061598] gi|328676274|gb|AEB27144.1| Cytochrome O ubiquinol oxidase subunit IV [Francisella cf. novicida Fx1] Length = 110 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 70/111 (63%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMN-MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M +++++ + +YGT K + GF+LS+++T I F +V +C+T+ + A+ Sbjct: 1 MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSP-VALCVTVAVLAVV 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q+ V LVFFLH+ST + W++++ IF II+V I G+MW+M+ L + MM Sbjct: 60 QLFVQLVFFLHLSTDSKARWNLVSAIFAIIVVVIVVAGTMWIMFDLYDMMM 110 >gi|89255628|ref|YP_512989.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica LVS] gi|115314132|ref|YP_762855.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica OSU18] gi|156501577|ref|YP_001427642.1| cytochrome C oxidase/ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009930|ref|ZP_02274861.1| cytOchrome o ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica FSC200] gi|254367022|ref|ZP_04983058.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica 257] gi|290953473|ref|ZP_06558094.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica URFT1] gi|295313271|ref|ZP_06803908.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica URFT1] gi|89143459|emb|CAJ78635.1| Cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica LVS] gi|115129031|gb|ABI82218.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica OSU18] gi|134252848|gb|EBA51942.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica 257] gi|156252180|gb|ABU60686.1| cytochrome C oxidase/ubiquinol oxidase subunit IV [Francisella tularensis subsp. holarctica FTNF002-00] Length = 110 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 70/111 (63%), Gaps = 2/111 (1%) Query: 1 MKYDNIHNMN-MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59 M +++++ + +YGT K + GF+LS+++T I F +V +C+T+ + A+ Sbjct: 1 MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSP-VALCVTVAILAVV 59 Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 Q+ V LVFFLH+ST + W++++ IF I++V I G+MW+M+ L + MM Sbjct: 60 QLFVQLVFFLHLSTDSKARWNLVSAIFAIVVVVIVVAGTMWIMFDLYDMMM 110 >gi|238759271|ref|ZP_04620438.1| hypothetical protein yaldo0001_8190 [Yersinia aldovae ATCC 35236] gi|238702558|gb|EEP95108.1| hypothetical protein yaldo0001_8190 [Yersinia aldovae ATCC 35236] Length = 80 Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 1/78 (1%) Query: 33 IPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVA 92 IPF +VM G + T+V A+ QIIVHLV+FLHM+ K E+ W+++A +FT +++A Sbjct: 2 IPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGKSEERWNLVAFLFTAMIIA 60 Query: 93 ICFVGSMWVMYHLNNNMM 110 I VGS+W+MY+LN NMM Sbjct: 61 IVVVGSLWIMYNLNINMM 78 >gi|218514775|ref|ZP_03511615.1| putative cytochrome o ubiquinol oxidase protein CyoD [Rhizobium etli 8C-3] Length = 91 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + + H +GT K + GF+LS+ILT IPF +VM G + + ++ QI+ Sbjct: 16 HGHSHGHQA-GHGTFKSYMAGFVLSVILTAIPFWLVMSGVIASPALTAVLVMGLGAVQIV 74 Query: 63 VHLVFFLHMSTKVEDG 78 VH++FFLHM+T+ Sbjct: 75 VHMIFFLHMNTRERGR 90 >gi|194016546|ref|ZP_03055160.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus pumilus ATCC 7061] gi|194012019|gb|EDW21587.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus pumilus ATCC 7061] Length = 126 Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 2/97 (2%) Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 ++ H + K +VGFILS++LTI+ F I + G + + I A Q + L Sbjct: 5 TNSSAEHEHFPWK-HVVGFILSIVLTILAFWIAI-GAEIGSSAKLWIIFGFAFIQAFLQL 62 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 F+HM+ + +F + I +GS+W+ Sbjct: 63 FMFMHMTESENGTVQVGNTLFGLFCAIIFVIGSVWIF 99 >gi|238783618|ref|ZP_04627639.1| hypothetical protein yberc0001_14010 [Yersinia bercovieri ATCC 43970] gi|238715496|gb|EEQ07487.1| hypothetical protein yberc0001_14010 [Yersinia bercovieri ATCC 43970] Length = 80 Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 1/78 (1%) Query: 33 IPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVA 92 IPF +VM G + T+V A+ QIIVHLV+FLHM+ E+ W+++A +FT +++A Sbjct: 2 IPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGSSEERWNLVAFLFTAMIIA 60 Query: 93 ICFVGSMWVMYHLNNNMM 110 I VGS+W+MY+LN NMM Sbjct: 61 IVVVGSLWIMYNLNINMM 78 >gi|254472570|ref|ZP_05085969.1| cytochrome o ubiquinol oxidase subunit IV [Pseudovibrio sp. JE062] gi|211958034|gb|EEA93235.1| cytochrome o ubiquinol oxidase subunit IV [Pseudovibrio sp. JE062] Length = 99 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 3/102 (2%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 M+ S+ + K+ + GFIL+L LT+IPF V F + I LCA+ Q+ VHL +F Sbjct: 1 MHPQSH-SAKRLITGFILALALTLIPFAAVWTMAF-PVELTFGIIALCALVQVGVHLHYF 58 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 L + ++ +++AM F +++ + G++W+M+ L MM Sbjct: 59 LGIDSRT-PIENVLAMSFAGVLIFLMVGGTLWIMFDLYERMM 99 >gi|254488164|ref|ZP_05101369.1| cytochrome o ubiquinol oxidase subunit IV [Roseobacter sp. GAI101] gi|214045033|gb|EEB85671.1| cytochrome o ubiquinol oxidase subunit IV [Roseobacter sp. GAI101] Length = 103 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + GF L++ LT + F + F + T+ + AIAQ++VH FFLH+ + Sbjct: 11 LRMYFTGFGLAVTLTALSFLTAILQPFGPVG-LFATLAVLAIAQVVVHFRFFLHIDLSRQ 69 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + ++FT +++AI G++W++ L MM Sbjct: 70 AREDLQLILFTGLLIAIMVAGTIWILGDLMTRMM 103 >gi|85717119|ref|ZP_01048079.1| Cytochrome C oxidase subunit IV [Nitrobacter sp. Nb-311A] gi|85696079|gb|EAQ33977.1| Cytochrome C oxidase subunit IV [Nitrobacter sp. Nb-311A] Length = 102 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K LVG +L+ +LT IPFG V + I + A+AQ++VHL +FL + K Sbjct: 2 LKSYLVGVLLASVLTAIPFGFVATRTLPPGQTLI-VIGVAAVAQVVVHLRYFLRLDLKSR 60 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYH 104 +A+ F ++ I G++W+M+ Sbjct: 61 SQDKFIALCFAATVLFILVGGTLWIMFD 88 >gi|118591209|ref|ZP_01548608.1| Prokaryotic Cytochrome C oxidase subunit IV [Stappia aggregata IAM 12614] gi|118436285|gb|EAV42927.1| Prokaryotic Cytochrome C oxidase subunit IV [Stappia aggregata IAM 12614] Length = 101 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 MN + + L GF+L+++LT IPF +V G + + V + +IVHLVFF Sbjct: 1 MNHSAERSLSTYLTGFVLAVLLTAIPFALVWGGLLAGSAVYAVIAVAAVLQ-VIVHLVFF 59 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 LH+ K ++ + F +++ I GS+W+M L++ M Sbjct: 60 LHIDLKSTPAENLFFLAFAAVLIFIMVGGSLWIMMDLHHRM 100 >gi|296284679|ref|ZP_06862677.1| hypothetical protein CbatJ_13713 [Citromicrobium bathyomarinum JL354] Length = 132 Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 3/103 (2%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + ++ + GF++SL+LT+ F ++ L I A+ QI+ HL Sbjct: 10 DPQGNAASEIRSYATGFVISLLLTVGAFAALLSD--LPTTWKIALICGAALIQIVAHLRN 67 Query: 68 FLHMSTKVEDG-WSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 FLH+S ++ ++F++ ++AI G+ ++M L M Sbjct: 68 FLHLSLADAQSEEDLLLVLFSVCLLAIMAGGTWYIMSDLGGRM 110 >gi|94495037|ref|ZP_01301618.1| cytochrome o ubiquinol oxidase, subunit IV [Sphingomonas sp. SKA58] gi|94425303|gb|EAT10323.1| cytochrome o ubiquinol oxidase, subunit IV [Sphingomonas sp. SKA58] Length = 103 Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + LVG+ ++++T + F IV K + ++ A QI++ FLH+S + Sbjct: 11 VRSYLVGYAGAIVMTGVAFAIVQWPIASPK-LTFAAVLTLAFTQIVLQFRCFLHISLRRS 69 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + ++F+ ++VA+ G++ ++ +L MM Sbjct: 70 ARDDLQLILFSTLVVALMVGGTLVILLNLRERMM 103 >gi|255019614|ref|ZP_05291695.1| hypothetical protein ACA_2321 [Acidithiobacillus caldus ATCC 51756] gi|254970958|gb|EET28439.1| hypothetical protein ACA_2321 [Acidithiobacillus caldus ATCC 51756] Length = 121 Score = 77.1 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 2/118 (1%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 + N +++ L GFIL+ +L + +V ++ I+ CA +I Sbjct: 5 HANPIEHPEVQMASRRGYLTGFILASVLMALATFLVSSHALPPFALLLA-IMACAGFAVI 63 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS-MEGMRSIH 119 + F LH+ + W+ +A++ + + I + W+ L M + GM +H Sbjct: 64 AQVYFLLHIDISEHNIWNTVALVAFVPLFVITIGLTWWMFSQLYLRTMPSIPGMPGMH 121 >gi|32490899|ref|NP_871153.1| hypothetical protein WGLp150 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166105|dbj|BAC24296.1| cyoD [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 109 Score = 76.7 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 57/93 (61%) Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77 K +G+ILS T IPF +++ + L ++ I++CA +Q I+ FFL++ Sbjct: 17 KSYFIGYILSFFFTCIPFLLIINKWNLYNELIYNLIIICAFSQAIIQFTFFLNIFDNSRI 76 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 W ++++ FTI+++ I GS+W+M HL++N+M Sbjct: 77 NWKLISLTFTILIIFILIFGSIWIMNHLHHNLM 109 >gi|332187380|ref|ZP_08389118.1| cytochrome o ubiquinol oxidase subunit IV [Sphingomonas sp. S17] gi|332012541|gb|EGI54608.1| cytochrome o ubiquinol oxidase subunit IV [Sphingomonas sp. S17] Length = 127 Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 5/120 (4%) Query: 1 MKYDNIHNMNMHSY----GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLC 56 M D + G + ++G + +LT F +V + ++ Sbjct: 9 MARDETAPGEESEHDSIAGGVRSYVIGLAAAAVLTAASFALVQMDIIWGPAV-PAALLAL 67 Query: 57 AIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116 AI Q+ VHLVFFLH++T ++ +++A++F +++V + +GS+W+M HLN+N+M Sbjct: 68 AIGQMGVHLVFFLHITTGPDNSNNVLALLFGVLIVTLVLLGSIWIMGHLNHNLMGPMATP 127 >gi|238795551|ref|ZP_04639066.1| hypothetical protein ymoll0001_11420 [Yersinia mollaretii ATCC 43969] gi|238720670|gb|EEQ12471.1| hypothetical protein ymoll0001_11420 [Yersinia mollaretii ATCC 43969] Length = 75 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 1/74 (1%) Query: 37 IVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFV 96 +VM G + T+V A+ QIIVHLV+FLHM+ E+ W+++A +FT +++AI V Sbjct: 1 MVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGSSEERWNLVAFLFTAMIIAIVVV 59 Query: 97 GSMWVMYHLNNNMM 110 GS+W+MY+LN NMM Sbjct: 60 GSLWIMYNLNINMM 73 >gi|294851454|ref|ZP_06792127.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] gi|294820043|gb|EFG37042.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] Length = 73 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 48/66 (72%) Query: 51 LTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + ++ A QI+VHL++FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM Sbjct: 1 MIVLAIAAVQILVHLIYFLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMM 60 Query: 111 SMEGMR 116 M Sbjct: 61 PMYMTP 66 >gi|27377828|ref|NP_769357.1| cytochrome O ubiquinol oxidase protein [Bradyrhizobium japonicum USDA 110] gi|7451519|pir||JC5902 ubiquinol oxidase (EC 1.-.-.-) IV - Bradyrhizobium japonicum gi|27350973|dbj|BAC47982.1| cytochrome O ubiquinol oxidase protein [Bradyrhizobium japonicum USDA 110] Length = 129 Score = 74.4 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%) Query: 34 PFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAI 93 F I +I IV AIAQ+ VHLVFFLH++T ++ +++A+ F +++V + Sbjct: 44 SFFIAGTDLVWQPSIPVALIV-LAIAQMGVHLVFFLHITTGPDNTNNVLALAFGLLVVFL 102 Query: 94 CFVGSMWVMYHLNNNMMSMEGMRSI 118 G++W+M HLN NM M+ + + Sbjct: 103 VVGGTVWIMSHLNGNMPPMDQIMRM 127 >gi|330993478|ref|ZP_08317413.1| Cytochrome o ubiquinol oxidase protein CyoD [Gluconacetobacter sp. SXCC-1] gi|329759508|gb|EGG76017.1| Cytochrome o ubiquinol oxidase protein CyoD [Gluconacetobacter sp. SXCC-1] Length = 84 Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%) Query: 29 ILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTI 88 ILT+ FG+VM I L A+ QI+VHL++FLHM+ E W++MA +FT+ Sbjct: 2 ILTVAAFGLVMSHAMSPSA-TGGAIALLAVVQIVVHLIYFLHMNGSSEQRWNVMAFVFTV 60 Query: 89 IMVAICFVGSMWVMYHLNNNMMS 111 + V + G+M++M+ + NMMS Sbjct: 61 LSVLVLVAGTMFIMHDTSINMMS 83 >gi|315646201|ref|ZP_07899321.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus vortex V453] gi|315278400|gb|EFU41716.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus vortex V453] Length = 107 Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M N H +G+ K +GF S+ILT+IP +VM + + ++ A+ Q Sbjct: 1 MVPSNSHQT-PEGHGSFKSYTIGFFCSIILTLIPITVVMNDWLEG-TWNSVVLMTAAVLQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 ++V L+FF+H+ + + +++++++ ++++ + GSMW+M Sbjct: 59 LMVQLLFFMHLREENKPRYNLISLVLGLVILLVIVAGSMWIM 100 >gi|16799095|ref|NP_469363.1| hypothetical protein lin0016 [Listeria innocua Clip11262] gi|16412437|emb|CAC95249.1| qoxD [Listeria innocua Clip11262] Length = 110 Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N N G + +VGF LS+ILT++ + + N+ + I + A Q Sbjct: 1 MAQNNKSNAAHAEGGIPWKHIVGFALSIILTLLAVWVAIYSTLT-TNVKVVIIFIFAFIQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + L+ F+HM+ + I ++F + + +GS WVM + N Sbjct: 60 AALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 107 >gi|46906242|ref|YP_012631.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes serotype 4b str. F2365] gi|47093031|ref|ZP_00230810.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes str. 4b H7858] gi|116871439|ref|YP_848220.1| quinol oxidase AA3, subunit IV [Listeria welshimeri serovar 6b str. SLCC5334] gi|217965918|ref|YP_002351596.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria monocytogenes HCC23] gi|226222656|ref|YP_002756763.1| quinol oxidase aa3-600 chain IV [Listeria monocytogenes Clip81459] gi|254824761|ref|ZP_05229762.1| quinol oxidase AA3 [Listeria monocytogenes FSL J1-194] gi|254851825|ref|ZP_05241173.1| quinol oxidase AA3 [Listeria monocytogenes FSL R2-503] gi|254930850|ref|ZP_05264209.1| quinol oxidase AA3 [Listeria monocytogenes HPB2262] gi|255519797|ref|ZP_05387034.1| quinol oxidase aa3-600 chain IV [Listeria monocytogenes FSL J1-175] gi|290892054|ref|ZP_06555051.1| quinol oxidase AA3 [Listeria monocytogenes FSL J2-071] gi|300763371|ref|ZP_07073369.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes FSL N1-017] gi|315273206|ref|ZP_07869233.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria marthii FSL S4-120] gi|46879506|gb|AAT02808.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes serotype 4b str. F2365] gi|47018599|gb|EAL09353.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes str. 4b H7858] gi|116740317|emb|CAK19435.1| quinol oxidase AA3, subunit IV [Listeria welshimeri serovar 6b str. SLCC5334] gi|217335188|gb|ACK40982.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria monocytogenes HCC23] gi|225875118|emb|CAS03808.1| Putative quinol oxidase aa3-600 chain IV [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605117|gb|EEW17725.1| quinol oxidase AA3 [Listeria monocytogenes FSL R2-503] gi|290558648|gb|EFD92165.1| quinol oxidase AA3 [Listeria monocytogenes FSL J2-071] gi|293582394|gb|EFF94426.1| quinol oxidase AA3 [Listeria monocytogenes HPB2262] gi|293594000|gb|EFG01761.1| quinol oxidase AA3 [Listeria monocytogenes FSL J1-194] gi|300515648|gb|EFK42697.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes FSL N1-017] gi|307569539|emb|CAR82718.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes L99] gi|313616168|gb|EFR89266.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria marthii FSL S4-120] gi|313621617|gb|EFR92434.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria innocua FSL S4-378] gi|328468340|gb|EGF39346.1| quinol oxidase aa3-600 chain IV [Listeria monocytogenes 1816] gi|328476159|gb|EGF46865.1| quinol oxidase aa3-600 chain IV [Listeria monocytogenes 220] gi|332310354|gb|EGJ23449.1| Quinol oxidase subunit 4 [Listeria monocytogenes str. Scott A] Length = 110 Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N N G + +VGF LS+ILT++ + + N+ + I + A Q Sbjct: 1 MTQNNKSNAAHAEGGIPWKHIVGFALSVILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + L+ F+HM+ + I ++F + + +GS WVM + N Sbjct: 60 AALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 107 >gi|16802064|ref|NP_463549.1| hypothetical protein lmo0016 [Listeria monocytogenes EGD-e] gi|47095077|ref|ZP_00232689.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes str. 1/2a F6854] gi|224498292|ref|ZP_03666641.1| hypothetical protein LmonF1_00795 [Listeria monocytogenes Finland 1988] gi|224503060|ref|ZP_03671367.1| hypothetical protein LmonFR_11156 [Listeria monocytogenes FSL R2-561] gi|254827441|ref|ZP_05232128.1| quinol oxidase AA3 [Listeria monocytogenes FSL N3-165] gi|254830691|ref|ZP_05235346.1| hypothetical protein Lmon1_05004 [Listeria monocytogenes 10403S] gi|254899669|ref|ZP_05259593.1| hypothetical protein LmonJ_07646 [Listeria monocytogenes J0161] gi|254913128|ref|ZP_05263140.1| qoxD [Listeria monocytogenes J2818] gi|254937509|ref|ZP_05269206.1| quinol oxidase AA3 [Listeria monocytogenes F6900] gi|284803249|ref|YP_003415114.1| hypothetical protein LM5578_3006 [Listeria monocytogenes 08-5578] gi|284996390|ref|YP_003418158.1| hypothetical protein LM5923_2955 [Listeria monocytogenes 08-5923] gi|16409375|emb|CAC98231.1| qoxD [Listeria monocytogenes EGD-e] gi|47016422|gb|EAL07343.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes str. 1/2a F6854] gi|258599818|gb|EEW13143.1| quinol oxidase AA3 [Listeria monocytogenes FSL N3-165] gi|258610110|gb|EEW22718.1| quinol oxidase AA3 [Listeria monocytogenes F6900] gi|284058811|gb|ADB69752.1| hypothetical protein LM5578_3006 [Listeria monocytogenes 08-5578] gi|284061857|gb|ADB72796.1| hypothetical protein LM5923_2955 [Listeria monocytogenes 08-5923] gi|293591130|gb|EFF99464.1| qoxD [Listeria monocytogenes J2818] Length = 110 Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N N G + +VGF LS++LT++ + + N+ + I + A Q Sbjct: 1 MTQNNKSNAAHAEGGIPWKHIVGFALSVVLTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + L+ F+HM+ + I ++F + + +GS WVM + N Sbjct: 60 AALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 107 >gi|254992950|ref|ZP_05275140.1| quinol oxidase aa3-600 chain IV [Listeria monocytogenes FSL J2-064] Length = 110 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N N G + +VGF LS+ILT++ + + N+ + I + A Q Sbjct: 1 MTQNNKSNAAHAEGGIPWKHIVGFALSVILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + L+ F+HM+ + I ++F + + +GS WVM + N Sbjct: 60 AALQLLMFMHMTEGRDGKIQISNILFAAFIAIVVVIGSYWVMEIGHMN 107 >gi|254512695|ref|ZP_05124761.1| Prokaryotic Cytochrome C oxidase subunit IV superfamily [Rhodobacteraceae bacterium KLH11] gi|221532694|gb|EEE35689.1| Prokaryotic Cytochrome C oxidase subunit IV superfamily [Rhodobacteraceae bacterium KLH11] Length = 102 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 55/92 (59%), Gaps = 1/92 (1%) Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77 ++ ++G+ SL+LT + FGI F ++ + +TI L +AQ++V LV+FLH+ + Sbjct: 7 RRYVIGYGGSLLLTFVVFGIA-YQFGIETPGVYMTIGLLGLAQLVVQLVYFLHIDRRRSS 65 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 + ++F+ +++ I G++WV+ +L M Sbjct: 66 REDLDLILFSTLVLLIIIGGTIWVLGNLAMRM 97 >gi|289433389|ref|YP_003463261.1| quinol oxidase AA3, subunit IV [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169633|emb|CBH26167.1| quinol oxidase AA3, subunit IV [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 110 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N N G + +VGF LS+ILT++ + + N+ + I + A Q Sbjct: 1 MAQNNKSNAAHAESGIPWKHIVGFALSIILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + L+ F+HM+ + I ++F + + +GS WVM + N Sbjct: 60 AALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 107 >gi|313640101|gb|EFS04727.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria seeligeri FSL S4-171] Length = 110 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N N G + +VGF LS+ILT++ + + N+ + I + A Q Sbjct: 1 MAQNNKSNTAHAEGGIPWKHIVGFALSIILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + L+ F+HM+ + I ++F + + +GS WVM + N Sbjct: 60 AALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 107 >gi|167463408|ref|ZP_02328497.1| hypothetical protein Plarl_12766 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382243|ref|ZP_08056155.1| cytochrome quinol oxidase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153791|gb|EFX46160.1| cytochrome quinol oxidase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 106 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 1/104 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 N H+ + G + +VG+++S++LT++ V N++ I + A Q + Sbjct: 2 SNSHDTSAEHKGFPWKHVVGYLVSIVLTLLALW-VAFKSGFSINVLMTFIYILAFLQAAL 60 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNN 107 L+ F+HM+ + M++ + + + GS+WVM + Sbjct: 61 QLLMFMHMTESSNGKYQTGTMLYAVFIAIVIAAGSVWVMSSGHA 104 >gi|299820826|ref|ZP_07052715.1| quinol oxidase subunit IV [Listeria grayi DSM 20601] gi|299817847|gb|EFI85082.1| quinol oxidase subunit IV [Listeria grayi DSM 20601] Length = 109 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 1/105 (0%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63 +N ++ H Q ++GF LS+ILT++ + + D ++ + I + A Q ++ Sbjct: 3 ENKNSTQTHKAHGPWQHIIGFALSIILTLLAVWVALYSTL-DHSVKVVIIFIFAFIQAML 61 Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 L F+HM+ + + ++F + + I +GS WVM + N Sbjct: 62 QLFMFMHMTEGKDGKVNTSGILFALFIAIIVVIGSYWVMEIGHMN 106 >gi|126730195|ref|ZP_01746007.1| cytochrome O ubiquinol oxidase subunit IV [Sagittula stellata E-37] gi|126709575|gb|EBA08629.1| cytochrome O ubiquinol oxidase subunit IV [Sagittula stellata E-37] Length = 103 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + GF +++LT + F + F I ++ + A Q++VH FFLH+ + Sbjct: 11 LRMYFTGFAAAIVLTALSFATAILQPFGPMGI-FASLAVLAAVQVVVHFRFFLHIDFSRQ 69 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + ++FT +++AI G++WV+ +L MM Sbjct: 70 KREDLQLILFTGLIIAIMVAGTVWVLGNLMARMM 103 >gi|126642214|ref|YP_001085198.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii ATCC 17978] Length = 74 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 31/74 (41%), Positives = 53/74 (71%), Gaps = 1/74 (1%) Query: 37 IVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFV 96 +VM G F + ++ I + A+AQ++V LV+FLHM+T E W+++A I+TI+ +A+ + Sbjct: 1 MVMAGGF-SRGLLVTVIAITAVAQVLVQLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLI 59 Query: 97 GSMWVMYHLNNNMM 110 GS+W+M +L+ NMM Sbjct: 60 GSVWIMNYLHYNMM 73 >gi|154687939|ref|YP_001423100.1| QoxD [Bacillus amyloliquefaciens FZB42] gi|154353790|gb|ABS75869.1| QoxD [Bacillus amyloliquefaciens FZB42] Length = 122 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 2/100 (2%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 HS+ K +VGF LS+ILT++ + + + I A Q + L+ F Sbjct: 5 SAEHSHFPWK-HIVGFALSIILTLLALWVAVYTELSPSAKL-WIIFGFAFIQAGLQLLMF 62 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 +HM+ G + +F + +GS+W+ ++ Sbjct: 63 MHMTESENGGIQVGNTLFGFFGAIVIILGSIWIFAAHYHH 102 >gi|56421991|ref|YP_149309.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus kaustophilus HTA426] gi|56381833|dbj|BAD77741.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus kaustophilus HTA426] Length = 99 Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 N H + ++GF+LSL+LT + + K + + IVL AI Q + L Sbjct: 2 GANSHRESFPWKHIIGFLLSLVLTFAALWVALSSGLPLKAV-IVIIVLFAIIQASLQLFL 60 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 F+H++ M+++ + + GS+WVM Sbjct: 61 FMHVNESDSGKVQTFNMVYSFFIAVVVVAGSIWVM 95 >gi|296331456|ref|ZP_06873928.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676443|ref|YP_003868115.1| cytochrome aa3-600 quinol oxidase subunit IV [Bacillus subtilis subsp. spizizenii str. W23] gi|317411865|sp|E0TW64|QOX4_BACPZ RecName: Full=Quinol oxidase subunit 4; AltName: Full=Quinol oxidase aa3-600, subunit qoxD; AltName: Full=Quinol oxidase polypeptide IV gi|296151571|gb|EFG92448.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414687|gb|ADM39806.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus subtilis subsp. spizizenii str. W23] Length = 124 Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 2/100 (2%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 HS+ K +VGF LS++LT++ + + L + I A Q + L+ F Sbjct: 5 SAEHSHFPWK-HIVGFALSIVLTLLALWVAVY-TDLSSSAKLWIIFGFAFIQAALQLLMF 62 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 +HM+ G + +F + +GS+W+ ++ Sbjct: 63 MHMTESENGGIQVGNTLFGFFGAIVIVLGSIWIFAAHYHH 102 >gi|219682374|ref|YP_002468758.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219622107|gb|ACL30263.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086195|gb|ADP66277.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086771|gb|ADP66852.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087359|gb|ADP67439.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087857|gb|ADP67936.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 105 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 38/94 (40%), Positives = 66/94 (70%), Gaps = 1/94 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K L+GF+ S +LT +PF + ++ FF + + + +LCAI+QII+H V+FLH+S E Sbjct: 13 IKSYLLGFLFSSLLTTLPFLLAIEKFFCSE-VNYIIFLLCAISQIIIHFVYFLHLSFDPE 71 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + W+++ ++F II++ I GS+W+M++LN+N M Sbjct: 72 ERWNLITLLFVIIIIFIVVFGSIWIMFNLNHNTM 105 >gi|308175541|ref|YP_003922246.1| cytochrome aa3-600 quinol oxidase subunit IV [Bacillus amyloliquefaciens DSM 7] gi|307608405|emb|CBI44776.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus amyloliquefaciens DSM 7] gi|328555519|gb|AEB26011.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus amyloliquefaciens TA208] gi|328913891|gb|AEB65487.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus amyloliquefaciens LL3] Length = 122 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 HS+ K +VGF LS+ILT++ + + L + I A Q + L+ F Sbjct: 5 SAEHSHFPWK-HIVGFALSIILTLLALWVAVY-TDLSSSAKLWIIFGFAFIQAGLQLLMF 62 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 +HM+ G + +F + +GS+W+ ++ Sbjct: 63 MHMTESENGGIQVGNTLFGFFGAIVIILGSIWIFAAHYHH 102 >gi|15617067|ref|NP_240280.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681819|ref|YP_002468205.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471521|ref|ZP_05635520.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11386746|sp|P57541|CYOD_BUCAI RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD gi|25331171|pir||F84984 cytochrome o ubiquinol oxidase subunit IV [imported] - Buchnera sp. (strain APS) gi|10039132|dbj|BAB13166.1| cytochrome o ubiquinol oxidase subunit IV [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624662|gb|ACL30817.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 105 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 38/94 (40%), Positives = 66/94 (70%), Gaps = 1/94 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K L+GF+ S +LT +PF + ++ FF + + + +LCAI+QII+H V+FLH+S E Sbjct: 13 MKSYLLGFLFSSLLTTLPFLLAIEKFFCSE-VNYIIFLLCAISQIIIHFVYFLHLSFDPE 71 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + W+++ ++F II++ I GS+W+M++LN+N M Sbjct: 72 ERWNLITLLFVIIIIFIVVFGSIWIMFNLNHNTM 105 >gi|16080865|ref|NP_391693.1| cytochrome aa3-600 quinol oxidase subunit IV [Bacillus subtilis subsp. subtilis str. 168] gi|221311779|ref|ZP_03593626.1| cytochrome aa3 quinol oxidase (subunit IV) [Bacillus subtilis subsp. subtilis str. 168] gi|221316104|ref|ZP_03597909.1| cytochrome aa3 quinol oxidase (subunit IV) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321017|ref|ZP_03602311.1| cytochrome aa3 quinol oxidase (subunit IV) [Bacillus subtilis subsp. subtilis str. JH642] gi|221325301|ref|ZP_03606595.1| cytochrome aa3 quinol oxidase (subunit IV) [Bacillus subtilis subsp. subtilis str. SMY] gi|321313371|ref|YP_004205658.1| cytochrome aa3-600 quinol oxidase subunit IV [Bacillus subtilis BSn5] gi|464515|sp|P34959|QOX4_BACSU RecName: Full=Quinol oxidase subunit 4; AltName: Full=Quinol oxidase aa3-600, subunit QoxD; AltName: Full=Quinol oxidase polypeptide IV gi|143399|gb|AAA22689.1| quinol oxidase [Bacillus subtilis] gi|413964|emb|CAA51596.1| ipa-40d qoxD [Bacillus subtilis subsp. subtilis str. 168] gi|2636349|emb|CAB15840.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus subtilis subsp. subtilis str. 168] gi|291486405|dbj|BAI87480.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus subtilis subsp. natto BEST195] gi|320019645|gb|ADV94631.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus subtilis BSn5] Length = 124 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 2/100 (2%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 HS+ K +VGFILS++LT++ + + L + I A Q + L+ F Sbjct: 5 SAEHSHFPWK-HIVGFILSIVLTLLALWVAVY-TDLSSSAKLWIIFGFAFIQAALQLLMF 62 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 +HM+ + +F + +GS+W+ ++ Sbjct: 63 MHMTESENGTIQVGNTLFGFFGAIVIVLGSIWIFAAHYHH 102 >gi|294498633|ref|YP_003562333.1| cytochrome o quinol oxidase subunit IV [Bacillus megaterium QM B1551] gi|295703992|ref|YP_003597067.1| cytochrome o quinol oxidase subunit IV [Bacillus megaterium DSM 319] gi|294348570|gb|ADE68899.1| cytochrome o quinol oxidase subunit IV [Bacillus megaterium QM B1551] gi|294801651|gb|ADF38717.1| cytochrome o quinol oxidase subunit IV [Bacillus megaterium DSM 319] Length = 98 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%) Query: 12 HSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHM 71 ++G+ K +GFI S+ILT+IP +V+ F KNI+ +I+ A+ Q + L FF+H+ Sbjct: 2 ENHGSLKAYTIGFIFSIILTVIPLMLVLNHVFA-KNILLASILGMAVLQFFIQLFFFMHI 60 Query: 72 STKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 + +++MA+I I+ V GS+W+M Sbjct: 61 KDGEKPRYNVMALILGIVFVITIVAGSIWIM 91 >gi|311070325|ref|YP_003975248.1| cytochrome aa3-600 quinol oxidase subunit IV [Bacillus atrophaeus 1942] gi|310870842|gb|ADP34317.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus atrophaeus 1942] Length = 122 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 2/101 (1%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 N H++ K +VGF LS++LT++ + + + I A Q + L+ Sbjct: 2 ATNEHNHFPWK-HIVGFALSIVLTLLALWVAVYTELSPSAKL-WIIFGFAFIQAALQLLM 59 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 F+HM + +F + +GS+W+ ++ Sbjct: 60 FMHMRESENGTIQVGNTLFGFFGAIVIVLGSVWIFAAHYHH 100 >gi|138897017|ref|YP_001127470.1| cytochrome aa3 quinol oxidase polypeptide IV [Geobacillus thermodenitrificans NG80-2] gi|134268530|gb|ABO68725.1| Cytochrome aa3 quinol oxidase polypeptide IV [Geobacillus thermodenitrificans NG80-2] Length = 99 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 N H + L+GF+LSL+LT + + K + + IVL A+ Q + L Sbjct: 2 GTNGHHESFPWKHLIGFVLSLLLTFAALWVALSSGLPLKAV-IVVIVLFAMIQASLQLFM 60 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 F+H+ M+++ + I GS+WVM Sbjct: 61 FMHVVESDSGKVQTFNMVYSFFIAVIVVAGSVWVM 95 >gi|149182658|ref|ZP_01861126.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. SG-1] gi|148849627|gb|EDL63809.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. SG-1] Length = 100 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 VGFI+SL+LT V L ++ I A+ Q + L F+H++ + Sbjct: 11 SHFVGFIMSLVLTFAAAW-VALKTSLSFTVVMWVIGTLAVVQAGLQLFMFMHVNEGEDGK 69 Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLNN 107 I+ +I+ + + +GS+WV+ + Sbjct: 70 VQIINIIYAVFCAVVIVIGSIWVLTSGHA 98 >gi|198282920|ref|YP_002219241.1| hypothetical protein Lferr_0784 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667693|ref|YP_002425123.1| cytochrome o ubiquinol oxidase, subunit IV [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247441|gb|ACH83034.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519906|gb|ACK80492.1| cytochrome o ubiquinol oxidase, subunit IV [Acidithiobacillus ferrooxidans ATCC 23270] Length = 118 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 1/113 (0%) Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62 +D+ T + GF +S IL + +V ++ I +CA II Sbjct: 5 HDDPTLHPEVQMSTSRGYFSGFAISSILMFVATFLVASRAVPPFGLLM-VISVCAGIAII 63 Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115 + F LH+ + W+ +A++ + + I + W+ L M M GM Sbjct: 64 AQIYFLLHIDVSEHNIWNTVALVLFMPLFLITIGLTWWMFSQLYLRTMIMPGM 116 >gi|218289388|ref|ZP_03493622.1| cytochrome aa3 quinol oxidase, subunit IV [Alicyclobacillus acidocaldarius LAA1] gi|258510664|ref|YP_003184098.1| cytochrome aa3 quinol oxidase, subunit IV [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218240494|gb|EED07675.1| cytochrome aa3 quinol oxidase, subunit IV [Alicyclobacillus acidocaldarius LAA1] gi|257477390|gb|ACV57709.1| cytochrome aa3 quinol oxidase, subunit IV [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 106 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 31 TIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIM 90 T I F + + ++ IV+ + Q++V L F+H + + W + A+ F + + Sbjct: 29 TAIAFWLALA-THQPPALVITIIVILGVGQLLVQLYMFMHFTESDDRAWQVPAIYFGLFI 87 Query: 91 VAICFVGSMWVM 102 V GS+W+M Sbjct: 88 VFCVVGGSIWIM 99 >gi|295695109|ref|YP_003588347.1| cytochrome C oxidase subunit IV [Bacillus tusciae DSM 2912] gi|295410711|gb|ADG05203.1| cytochrome C oxidase subunit IV [Bacillus tusciae DSM 2912] Length = 104 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 45/96 (46%), Gaps = 2/96 (2%) Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 N + +G+ ++ ++ F + ++ T+I F +V G + ++ I+ A+ Q+I+ Sbjct: 10 NTGTESASGHGSVRKHIISFAIMILFTVIAFAMV--GAGMSPTVVIPVILALAVIQVILQ 67 Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMW 100 L F+H++ K ++ ++ V +W Sbjct: 68 LWDFMHLNQKGHSFPTLFIASGAMLGFIFVLVLVLW 103 >gi|229541706|ref|ZP_04430766.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus coagulans 36D1] gi|229326126|gb|EEN91801.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus coagulans 36D1] Length = 94 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 ++GF+LS++LT++ + + L K + TI A Q V L F+H+ Sbjct: 10 GHIIGFLLSIVLTLVALYVALY-TNLSKTAIIWTIGFFAFLQAGVQLFMFMHVKEGESGK 68 Query: 79 WSIMAMIFTIIMVAICFVGSMWVMY 103 ++ MI++II+ + G++WVM+ Sbjct: 69 INVGNMIYSIIIAIVVVYGTIWVMH 93 >gi|260430762|ref|ZP_05784734.1| cytochrome C oxidase subunit IV [Silicibacter lacuscaerulensis ITI-1157] gi|260418203|gb|EEX11461.1| cytochrome C oxidase subunit IV [Silicibacter lacuscaerulensis ITI-1157] Length = 93 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80 ++G+ SL+LT+ F V + + LTI L +AQ+IV LV+FLH+ + Sbjct: 1 MIGYGSSLLLTLAMFATVHWFGIETRGV-YLTIGLLGLAQLIVQLVYFLHIDRRRSSRED 59 Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNM-MS 111 + ++F+ +++ I G++W++ +L M M Sbjct: 60 LDLVLFSTLVLLIIIGGTVWILGNLAMRMHMP 91 >gi|226314593|ref|YP_002774489.1| cytochrome c oxidase polypeptide IVB [Brevibacillus brevis NBRC 100599] gi|226097543|dbj|BAH45985.1| cytochrome c oxidase polypeptide IVB [Brevibacillus brevis NBRC 100599] Length = 105 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 3/90 (3%) Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73 + K+ LV FI SL+LT + F V IV A Q L ++HM Sbjct: 17 HEGPKRHLVAFIGSLVLTALAFIAVAYEAIPS-GFTVPFIVALAFVQAFFQLYVWMHMDQ 75 Query: 74 KVED--GWSIMAMIFTIIMVAICFVGSMWV 101 K + SI A +F I+M I F+ +WV Sbjct: 76 KGHEFARISIFAGLFVIMMAIIVFIFWVWV 105 >gi|330950891|gb|EGH51151.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae Cit 7] Length = 78 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 34 PFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAI 93 PF +VM K++ +++ AI QI+VHL +FLH+ ++MA FT +++ + Sbjct: 1 PFALVMSPSL-PKDMTIAIVLVFAIIQILVHLHYFLHLDFTSVQRNNVMAFAFTTMVIVL 59 Query: 94 CFVGSMWVMYHLNNNMMS 111 S+W+++ ++ MM+ Sbjct: 60 LVGLSLWIIFSVHREMMA 77 >gi|94498851|ref|ZP_01305392.1| Prokaryotic Cytochrome C oxidase subunit IV [Sphingomonas sp. SKA58] gi|94421692|gb|EAT06752.1| Prokaryotic Cytochrome C oxidase subunit IV [Sphingomonas sp. SKA58] Length = 85 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 49/67 (73%) Query: 51 LTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 L I+ A Q++VH+++FLHM+++VE GWS MAM+ TI++V I GSMWVMYHLN NMM Sbjct: 1 LLILAFAAVQVVVHMIYFLHMNSRVEGGWSFMAMMLTIVLVVIVLSGSMWVMYHLNANMM 60 Query: 111 SMEGMRS 117 M+ Sbjct: 61 PHADMQM 67 >gi|258510524|ref|YP_003183958.1| cytochrome C oxidase subunit IV [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477250|gb|ACV57569.1| cytochrome C oxidase subunit IV [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 107 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74 G + ++G+ LSLI T I F + + + + + + + A QI V L FF+H++ Sbjct: 13 GGLAKYIIGYGLSLIFTAIAFWLALSHAMSIRP-LIILLFVLAALQIGVQLFFFMHVTEG 71 Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVM 102 + + ++ +I + SMW+M Sbjct: 72 DGPPYHALLLLLGMIFTFAVAMMSMWIM 99 >gi|52082323|ref|YP_081114.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus licheniformis ATCC 14580] gi|52787714|ref|YP_093543.1| QoxD [Bacillus licheniformis ATCC 14580] gi|319648197|ref|ZP_08002414.1| QoxD protein [Bacillus sp. BT1B_CT2] gi|52005534|gb|AAU25476.1| cytochrome aa3 quinol oxidase (subunit IV) [Bacillus licheniformis ATCC 14580] gi|52350216|gb|AAU42850.1| QoxD [Bacillus licheniformis ATCC 14580] gi|317389832|gb|EFV70642.1| QoxD protein [Bacillus sp. BT1B_CT2] Length = 121 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 3/101 (2%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 HS+ K +VGF+LS++LT++ ++ L I AI Q + L+ Sbjct: 5 QSAEHSHFPWK-HIVGFVLSIVLTLLALWVIYTD--LSMAAKLWIIFGFAIIQAGLQLLM 61 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 F+HM+ + +F + GS+W+ N + Sbjct: 62 FMHMTESDSGKIQVGNTLFAAFIAVAIIAGSVWIFAAHNYH 102 >gi|228963800|ref|ZP_04124940.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar sotto str. T04001] gi|228795871|gb|EEM43339.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar sotto str. T04001] Length = 103 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + + + TI++ A+AQ Sbjct: 1 MAQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTVLTTIIITAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|207744471|ref|YP_002260863.1| hypothetical ubiquinol oxidase subunit ( partial sequence) protein [Ralstonia solanacearum IPO1609] gi|206595877|emb|CAQ62804.1| hypothetical ubiquinol oxidase subunit ( partial sequence) protein [Ralstonia solanacearum IPO1609] Length = 56 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 26/54 (48%), Positives = 42/54 (77%) Query: 57 AIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 A+ QI+VHL++FLH+ W++MA +FT++++AI VGS+WVM+++N NMM Sbjct: 1 AVVQIVVHLIYFLHLDGSSAQRWNVMAFLFTLLILAIVIVGSLWVMHNMNINMM 54 >gi|47568830|ref|ZP_00239524.1| quinol oxidase, subunit IV [Bacillus cereus G9241] gi|47554506|gb|EAL12863.1| quinol oxidase, subunit IV [Bacillus cereus G9241] Length = 103 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + L + + TI++ A+AQ Sbjct: 1 MSQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|319892052|ref|YP_004148927.1| quinol oxidase polypeptide IV QoxD [Staphylococcus pseudintermedius HKU10-03] gi|317161748|gb|ADV05291.1| quinol oxidase polypeptide IV QoxD [Staphylococcus pseudintermedius HKU10-03] gi|323464839|gb|ADX76992.1| quinol oxidase subunit IV [Staphylococcus pseudintermedius ED99] Length = 96 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + +GFI S+ILT++ + + I A Q + L+ F+H++ Sbjct: 3 TIVKHTIGFIASIILTLLAVFVTLYTSL-SFQAKVTIIFGFAFIQAFLQLLMFMHLTEGK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106 + + +IF II+ I +G+ WVM + Sbjct: 62 DGRVQLAKVIFAIIITLITVIGTYWVMQGGH 92 >gi|229195023|ref|ZP_04321800.1| Quinol oxidase, subunit IV [Bacillus cereus m1293] gi|228588458|gb|EEK46499.1| Quinol oxidase, subunit IV [Bacillus cereus m1293] Length = 103 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + L + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TDLPLSTILTTIIVMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E ++ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQVLTMIYSFFVATATVGLTVWIFFSM 103 >gi|229028499|ref|ZP_04184619.1| Quinol oxidase, subunit IV [Bacillus cereus AH1271] gi|228732812|gb|EEL83674.1| Quinol oxidase, subunit IV [Bacillus cereus AH1271] Length = 103 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + L + + TI++ A+AQ Sbjct: 1 MDQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIVMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|222094455|ref|YP_002528514.1| quinol oxidase, subunit iv (cytochrome c oxidase, subunit iv) [Bacillus cereus Q1] gi|221238512|gb|ACM11222.1| quinol oxidase, subunit IV (cytochrome C oxidase, subunit IV) [Bacillus cereus Q1] Length = 103 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + L + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-SDLPLSTILTTIIVMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E ++ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQVLTMIYSFFVATATVGLTVWIFFSM 103 >gi|261420865|ref|YP_003254547.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus sp. Y412MC61] gi|297531650|ref|YP_003672925.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus sp. C56-T3] gi|319768536|ref|YP_004134037.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus sp. Y412MC52] gi|261377322|gb|ACX80065.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp. Y412MC61] gi|297254902|gb|ADI28348.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp. C56-T3] gi|317113402|gb|ADU95894.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp. Y412MC52] Length = 99 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 1/95 (1%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 N H + ++GF+LSL+LT + + K ++ + +V + Q + L Sbjct: 2 GTNGHHESFPWKHIIGFLLSLVLTFAALWVALSSGLPLKAVIVIIVVFA-VIQASLQLFM 60 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 F+H++ M ++ + + GS+WVM Sbjct: 61 FMHVNESDSGRIQTFNMAYSFFIAIVVVAGSIWVM 95 >gi|229171483|ref|ZP_04299067.1| Quinol oxidase, subunit IV [Bacillus cereus MM3] gi|228612021|gb|EEK69259.1| Quinol oxidase, subunit IV [Bacillus cereus MM3] Length = 103 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + + + TI++ A+AQ Sbjct: 1 MDQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTVLTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|295402443|ref|ZP_06812396.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus thermoglucosidasius C56-YS93] gi|312112704|ref|YP_003991020.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus sp. Y4.1MC1] gi|294975534|gb|EFG51159.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus thermoglucosidasius C56-YS93] gi|311217805|gb|ADP76409.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp. Y4.1MC1] Length = 99 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 1/96 (1%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 N H + +VGFI SL+LT + + + IV+ A+ Q + L Sbjct: 2 GANHHHETFPWKHIVGFIFSLLLTFAALWVALSSGL-STGAIIGIIVILAVIQASLQLFM 60 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103 F+HM+ + M ++ + + VGS+W M Sbjct: 61 FMHMTESDSGKIQTINMAYSFFIAVVVVVGSIWTMS 96 >gi|30018877|ref|NP_830508.1| cytochrome aa3 quinol oxidase polypeptide IV [Bacillus cereus ATCC 14579] gi|75762631|ref|ZP_00742476.1| Cytochrome aa3 quinol oxidase polypeptide IV [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218233610|ref|YP_002365494.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus B4264] gi|218895753|ref|YP_002444164.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus G9842] gi|228899383|ref|ZP_04063644.1| Quinol oxidase, subunit IV [Bacillus thuringiensis IBL 4222] gi|228906453|ref|ZP_04070334.1| Quinol oxidase, subunit IV [Bacillus thuringiensis IBL 200] gi|228942998|ref|ZP_04105503.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228951198|ref|ZP_04113313.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228957118|ref|ZP_04118888.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar pakistani str. T13001] gi|228975946|ref|ZP_04136467.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977447|ref|ZP_04137841.1| Quinol oxidase, subunit IV [Bacillus thuringiensis Bt407] gi|229042561|ref|ZP_04190304.1| Quinol oxidase, subunit IV [Bacillus cereus AH676] gi|229068384|ref|ZP_04201687.1| Quinol oxidase, subunit IV [Bacillus cereus F65185] gi|229078011|ref|ZP_04210620.1| Quinol oxidase, subunit IV [Bacillus cereus Rock4-2] gi|229108307|ref|ZP_04237926.1| Quinol oxidase, subunit IV [Bacillus cereus Rock1-15] gi|229126126|ref|ZP_04255147.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-Cer4] gi|229143424|ref|ZP_04271853.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST24] gi|229149038|ref|ZP_04277282.1| Quinol oxidase, subunit IV [Bacillus cereus m1550] gi|229177228|ref|ZP_04304615.1| Quinol oxidase, subunit IV [Bacillus cereus 172560W] gi|29894419|gb|AAP07709.1| Cytochrome aa3 quinol oxidase polypeptide IV [Bacillus cereus ATCC 14579] gi|74489878|gb|EAO53249.1| Cytochrome aa3 quinol oxidase polypeptide IV [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218161567|gb|ACK61559.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus B4264] gi|218545032|gb|ACK97426.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus G9842] gi|228606234|gb|EEK63668.1| Quinol oxidase, subunit IV [Bacillus cereus 172560W] gi|228634420|gb|EEK91005.1| Quinol oxidase, subunit IV [Bacillus cereus m1550] gi|228640052|gb|EEK96453.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST24] gi|228657333|gb|EEL13150.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-Cer4] gi|228675144|gb|EEL30369.1| Quinol oxidase, subunit IV [Bacillus cereus Rock1-15] gi|228705349|gb|EEL57726.1| Quinol oxidase, subunit IV [Bacillus cereus Rock4-2] gi|228714845|gb|EEL66717.1| Quinol oxidase, subunit IV [Bacillus cereus F65185] gi|228726780|gb|EEL77994.1| Quinol oxidase, subunit IV [Bacillus cereus AH676] gi|228782271|gb|EEM30455.1| Quinol oxidase, subunit IV [Bacillus thuringiensis Bt407] gi|228783782|gb|EEM31840.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228802565|gb|EEM49412.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar pakistani str. T13001] gi|228808495|gb|EEM54999.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228816662|gb|EEM62782.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228853180|gb|EEM97956.1| Quinol oxidase, subunit IV [Bacillus thuringiensis IBL 200] gi|228860237|gb|EEN04636.1| Quinol oxidase, subunit IV [Bacillus thuringiensis IBL 4222] gi|326938472|gb|AEA14368.1| cytochrome aa3 quinol oxidase polypeptide IV [Bacillus thuringiensis serovar chinensis CT-43] Length = 103 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + + + TI++ A+AQ Sbjct: 1 MAQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTVLTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|229056467|ref|ZP_04195879.1| Quinol oxidase, subunit IV [Bacillus cereus AH603] gi|228720864|gb|EEL72414.1| Quinol oxidase, subunit IV [Bacillus cereus AH603] Length = 103 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHGHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTILTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + A ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRIQILTMIYSFFVAAATVGLTVWIFFSM 103 >gi|229165640|ref|ZP_04293412.1| Quinol oxidase, subunit IV [Bacillus cereus AH621] gi|228617814|gb|EEK74867.1| Quinol oxidase, subunit IV [Bacillus cereus AH621] Length = 103 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTILTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + A ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRIQILTMIYSFFVAAATVGLTVWIFFSM 103 >gi|52144611|ref|YP_082217.1| quinol oxidase, subunit IV (cytochrome C oxidase, subunit IV) [Bacillus cereus E33L] gi|206977797|ref|ZP_03238687.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus H3081.97] gi|217958284|ref|YP_002336830.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH187] gi|229154400|ref|ZP_04282519.1| Quinol oxidase, subunit IV [Bacillus cereus ATCC 4342] gi|301052349|ref|YP_003790560.1| quinol oxidase subunit IV [Bacillus anthracis CI] gi|51978080|gb|AAU19630.1| quinol oxidase, subunit IV (cytochrome C oxidase, subunit IV) [Bacillus cereus E33L] gi|206743994|gb|EDZ55411.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus H3081.97] gi|217064048|gb|ACJ78298.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH187] gi|228629048|gb|EEK85756.1| Quinol oxidase, subunit IV [Bacillus cereus ATCC 4342] gi|300374518|gb|ADK03422.1| quinol oxidase, subunit IV [Bacillus cereus biovar anthracis str. CI] gi|324324741|gb|ADY20001.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus thuringiensis serovar finitimus YBT-020] Length = 103 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + L + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E ++ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQVLTMIYSFFVATATVGLTVWIFFSM 103 >gi|30260850|ref|NP_843227.1| quinol oxidase, subunit IV [Bacillus anthracis str. Ames] gi|47525981|ref|YP_017330.1| quinol oxidase subunit IV [Bacillus anthracis str. 'Ames Ancestor'] gi|49183691|ref|YP_026943.1| quinol oxidase subunit IV [Bacillus anthracis str. Sterne] gi|65318128|ref|ZP_00391087.1| COG3125: Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Bacillus anthracis str. A2012] gi|170709009|ref|ZP_02899440.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0389] gi|229601937|ref|YP_002865295.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0248] gi|254762357|ref|ZP_05214201.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. Australia 94] gi|30254299|gb|AAP24713.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. Ames] gi|47501129|gb|AAT29805.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. 'Ames Ancestor'] gi|49177618|gb|AAT52994.1| quinol oxidase, subunit IV [Bacillus anthracis str. Sterne] gi|170126111|gb|EDS95007.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0389] gi|229266345|gb|ACQ47982.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0248] Length = 103 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + L + + TI+ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIAMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|56963899|ref|YP_175630.1| cytochrome aa3 quinol oxidase subunit IV QoxD [Bacillus clausii KSM-K16] gi|56910142|dbj|BAD64669.1| cytochrome aa3 quinol oxidase subunit IV QoxD [Bacillus clausii KSM-K16] Length = 104 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 1/100 (1%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 + +G + ++GF+LS++LT++ VM L ++ + + + A Q+ V L Sbjct: 6 ETAANHHGFPWKHVIGFVLSIVLTLLAVW-VMSQTNLAWDVRIIIVFVFAFIQMTVQLHM 64 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNN 107 F+H+ + F II+ I +GS V+ + Sbjct: 65 FMHIGEGKAGYVQVGHTWFAIIIAVIIVIGSYLVLRTGHI 104 >gi|229541232|ref|ZP_04430292.1| cytochrome c oxidase, subunit IV [Bacillus coagulans 36D1] gi|229325652|gb|EEN91327.1| cytochrome c oxidase, subunit IV [Bacillus coagulans 36D1] Length = 109 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K +V FIL + LTII F V L K I+L A Q++ L +F+HM+ K Sbjct: 25 MKYQVVSFILMMFLTIIAFWAV--HAHLSKWFTIPVILLLAAIQVVFQLFYFMHMNHKHH 82 Query: 77 DGWSIMAMIFTIIMVAICFV 96 +G + T++ Sbjct: 83 EGPKLFIFGGTLVAFVTVLA 102 >gi|319652991|ref|ZP_08007096.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. 2_A_57_CT2] gi|317395340|gb|EFV76073.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. 2_A_57_CT2] Length = 101 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 1/99 (1%) Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68 + S ++GF++SL+LT GIV+ L ++ I A+ Q + L F Sbjct: 2 EHHQSKSFPISHVIGFVVSLVLTFAAAGIVL-KTNLSFKVIMWIIGSLAVIQAGMQLFMF 60 Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNN 107 +H+ + +++ MI+ + MV + VGS+WV+ + Sbjct: 61 MHLREGEDGKTNLVNMIYAVFMVIVIVVGSIWVLTSGHA 99 >gi|229016029|ref|ZP_04172985.1| Quinol oxidase, subunit IV [Bacillus cereus AH1273] gi|229022248|ref|ZP_04178793.1| Quinol oxidase, subunit IV [Bacillus cereus AH1272] gi|228739051|gb|EEL89502.1| Quinol oxidase, subunit IV [Bacillus cereus AH1272] gi|228745262|gb|EEL95308.1| Quinol oxidase, subunit IV [Bacillus cereus AH1273] Length = 103 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + L + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIVMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E ++ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRIQVLTMIYSFFVATATVGLTVWIFFSM 103 >gi|196047111|ref|ZP_03114329.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus 03BB108] gi|225862678|ref|YP_002748056.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus 03BB102] gi|196022092|gb|EDX60781.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus 03BB108] gi|225788629|gb|ACO28846.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus 03BB102] Length = 103 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + L + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|49480257|ref|YP_034956.1| quinol oxidase subunit IV (cytochrome C oxidase subunit IV) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|165872915|ref|ZP_02217539.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0488] gi|167635163|ref|ZP_02393479.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0442] gi|167641836|ref|ZP_02400076.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0193] gi|170689434|ref|ZP_02880625.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0465] gi|177652861|ref|ZP_02935234.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0174] gi|190568522|ref|ZP_03021428.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis Tsiankovskii-I] gi|196035699|ref|ZP_03103102.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus W] gi|227816429|ref|YP_002816438.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. CDC 684] gi|254684223|ref|ZP_05148083.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. CNEVA-9066] gi|254725885|ref|ZP_05187667.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A1055] gi|254734415|ref|ZP_05192128.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. Western North America USA6153] gi|254742101|ref|ZP_05199788.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. Kruger B] gi|254755777|ref|ZP_05207810.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. Vollum] gi|49331813|gb|AAT62459.1| quinol oxidase, subunit IV (cytochrome C oxidase, subunit IV) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164711328|gb|EDR16881.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0488] gi|167510184|gb|EDR85590.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0193] gi|167529422|gb|EDR92173.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0442] gi|170666596|gb|EDT17368.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0465] gi|172081895|gb|EDT66964.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. A0174] gi|190560316|gb|EDV14295.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis Tsiankovskii-I] gi|195991666|gb|EDX55631.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus W] gi|227006937|gb|ACP16680.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str. CDC 684] Length = 103 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + L + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIVMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|42779847|ref|NP_977094.1| quinol oxidase, subunit IV [Bacillus cereus ATCC 10987] gi|42735764|gb|AAS39702.1| quinol oxidase, subunit IV [Bacillus cereus ATCC 10987] Length = 103 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTILTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|163938624|ref|YP_001643508.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus weihenstephanensis KBAB4] gi|229131647|ref|ZP_04260528.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST196] gi|163860821|gb|ABY41880.1| Cytochrome aa3 quinol oxidase subunit IV [Bacillus weihenstephanensis KBAB4] gi|228651795|gb|EEL07751.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST196] Length = 103 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + L + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHGHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E ++ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRIQVLTMIYSFFVATATVGLTVWIFFSM 103 >gi|206967909|ref|ZP_03228865.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH1134] gi|229095349|ref|ZP_04226341.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-29] gi|229101460|ref|ZP_04232201.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-28] gi|229114299|ref|ZP_04243719.1| Quinol oxidase, subunit IV [Bacillus cereus Rock1-3] gi|229188906|ref|ZP_04315939.1| Quinol oxidase, subunit IV [Bacillus cereus ATCC 10876] gi|206736829|gb|EDZ53976.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH1134] gi|228594611|gb|EEK52397.1| Quinol oxidase, subunit IV [Bacillus cereus ATCC 10876] gi|228669137|gb|EEL24559.1| Quinol oxidase, subunit IV [Bacillus cereus Rock1-3] gi|228681948|gb|EEL36084.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-28] gi|228688208|gb|EEL42094.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-29] Length = 103 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTVLTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|229159779|ref|ZP_04287787.1| Quinol oxidase, subunit IV [Bacillus cereus R309803] gi|228623716|gb|EEK80534.1| Quinol oxidase, subunit IV [Bacillus cereus R309803] Length = 103 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + + + TI++ A+AQ Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTSL-PLSTVLTTIIIMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|294499883|ref|YP_003563583.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus megaterium QM B1551] gi|295705268|ref|YP_003598343.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus megaterium DSM 319] gi|294349820|gb|ADE70149.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus megaterium QM B1551] gi|294802927|gb|ADF39993.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus megaterium DSM 319] Length = 102 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 N G + G ILSL LT G+V+ L ++I I++ A+ Q + LV Sbjct: 3 NKQGQKAGFPLSHVFGLILSLALTFAALGLVVL-ADLSRSITMTLIMILALLQAAMQLVM 61 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 F+HM+ + ++++ + VG++W++ Sbjct: 62 FMHMTESENGKVQVANILYSFFIALCIVVGTLWIL 96 >gi|196042071|ref|ZP_03109356.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus NVH0597-99] gi|218901894|ref|YP_002449728.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH820] gi|228925886|ref|ZP_04088970.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229089761|ref|ZP_04221021.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-42] gi|229120349|ref|ZP_04249599.1| Quinol oxidase, subunit IV [Bacillus cereus 95/8201] gi|229183032|ref|ZP_04310264.1| Quinol oxidase, subunit IV [Bacillus cereus BGSC 6E1] gi|196027096|gb|EDX65718.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus NVH0597-99] gi|218538317|gb|ACK90715.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH820] gi|228600489|gb|EEK58077.1| Quinol oxidase, subunit IV [Bacillus cereus BGSC 6E1] gi|228663159|gb|EEL18749.1| Quinol oxidase, subunit IV [Bacillus cereus 95/8201] gi|228693569|gb|EEL47272.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-42] gi|228833901|gb|EEM79454.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 103 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N G + GFILSL LT + + + I+ I A+AQ Sbjct: 1 MGQNNTQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTSLPLSTILTSII-AMAVAQ 59 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 60 ALLQLIMFMHLKEG-EGRIQILTMIYSFFVATATVGLTVWIFFSM 103 >gi|212638124|ref|YP_002314644.1| cytochrome aa3 quinol oxidase subunit IV [Anoxybacillus flavithermus WK1] gi|212559604|gb|ACJ32659.1| Cytochrome aa3 quinol oxidase subunit IV [Anoxybacillus flavithermus WK1] Length = 99 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 +VGF+ SLILT + V + I+ I A+ Q + L F+H++ + Sbjct: 10 SHVVGFLFSLILTFVAVF-VALKMNVSYTIVMWIIGSLAVIQAGLQLFMFMHVTEGEDGK 68 Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLNN 107 +++ M + + + + GS+WV+ + Sbjct: 69 TNVINMAYAVFVAIVIVAGSIWVLTSGHA 97 >gi|15614630|ref|NP_242933.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus halodurans C-125] gi|10174686|dbj|BAB05786.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus halodurans C-125] Length = 136 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 2/109 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M ++ HS+ +VGF LS+I T++ VM N+ + I + A Q Sbjct: 1 MAHEKE-TTATHSHSFPWMHVVGFALSIIFTLLAVW-VMSQTHWSWNVRVIVIFIFAFIQ 58 Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109 + V L F+HM I F I + I VGS V+ + + Sbjct: 59 MTVQLHMFMHMGEGKSGTVQIGHTWFAIAIAVIIVVGSYLVLTTGHLHT 107 >gi|311068009|ref|YP_003972932.1| cytochrome c oxidase, subunit IVB [Bacillus atrophaeus 1942] gi|310868526|gb|ADP32001.1| cytochrome c oxidase, subunit IVB [Bacillus atrophaeus 1942] Length = 110 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT++ F V + I+L A+ Q+I L +F+HM+ K Sbjct: 25 MKYQVLSFGLMIGLTLVAFLTVASDDIGNW-FTIPFIILLAVIQVIFQLFYFMHMNQKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + ++ + IF + + FV +W Sbjct: 84 EAPALFLYSGIFVAFITVLAFVTIIW 109 >gi|154685911|ref|YP_001421072.1| CtaF [Bacillus amyloliquefaciens FZB42] gi|308173457|ref|YP_003920162.1| cytochrome caa3 oxidase subunit IV [Bacillus amyloliquefaciens DSM 7] gi|154351762|gb|ABS73841.1| CtaF [Bacillus amyloliquefaciens FZB42] gi|307606321|emb|CBI42692.1| cytochrome caa3 oxidase (subunit IV) [Bacillus amyloliquefaciens DSM 7] gi|328553614|gb|AEB24106.1| cytochrome c oxidase, subunit IVB [Bacillus amyloliquefaciens TA208] gi|328911592|gb|AEB63188.1| cytochrome c oxidase subunit IV [Bacillus amyloliquefaciens LL3] Length = 110 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT++ F V ++L A+ Q+I L +F+HMS K Sbjct: 25 MKYQVISFGLMIGLTLVAFLTVAADGIAGW-FTMPFLILLAVIQVIFQLFYFMHMSQKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + S+ + IF + + FV +W Sbjct: 84 EAPSLFLYSGIFVAFITVLAFVTIIW 109 >gi|269940554|emb|CBI48933.1| putative quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus TW20] Length = 92 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 1/88 (1%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 + VGFI S++LT++ + + I A Q + L+ F+H++ + Sbjct: 2 KHTVGFIASIVLTLLAVYVTLYTSLT-FQAKLTIIFGFAFVQAGLQLLMFMHLTEGKDGR 60 Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLN 106 +IF +++ VG+ WVM + Sbjct: 61 LQTFKVIFALVITLCFVVGTYWVMQGGH 88 >gi|27904893|ref|NP_778019.1| cytochrome O ubiquinol oxidase protein CyoD [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46395812|sp|Q89AA6|CYOD_BUCBP RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD gi|27904291|gb|AAO27124.1| cytochrome O ubiquinol oxidase protein CyoD [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 100 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 44/67 (65%) Query: 43 FLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 +N + I++C QI+ H+ FFL++ +E W ++++IF++++ I +GS+WV+ Sbjct: 31 IFSRNYLYAFIIVCLFFQILAHIKFFLNLDFSLEQRWKLISVIFSLVVGLIILLGSIWVI 90 Query: 103 YHLNNNM 109 +LNNN+ Sbjct: 91 KNLNNNL 97 >gi|206978404|ref|ZP_03239274.1| cytochrome c oxidase, subunit IVB [Bacillus cereus H3081.97] gi|217961426|ref|YP_002339994.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH187] gi|222097389|ref|YP_002531446.1| cytochrome c oxidase, subunit iv [Bacillus cereus Q1] gi|229031571|ref|ZP_04187571.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1271] gi|229140669|ref|ZP_04269217.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST26] gi|229174608|ref|ZP_04302137.1| Cytochrome c oxidase, subunit IV [Bacillus cereus MM3] gi|229198057|ref|ZP_04324769.1| Cytochrome c oxidase, subunit IV [Bacillus cereus m1293] gi|206743384|gb|EDZ54821.1| cytochrome c oxidase, subunit IVB [Bacillus cereus H3081.97] gi|217066356|gb|ACJ80606.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH187] gi|221241447|gb|ACM14157.1| cytochrome c oxidase, subunit IV [Bacillus cereus Q1] gi|228585415|gb|EEK43521.1| Cytochrome c oxidase, subunit IV [Bacillus cereus m1293] gi|228608860|gb|EEK66153.1| Cytochrome c oxidase, subunit IV [Bacillus cereus MM3] gi|228642741|gb|EEK99024.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST26] gi|228729860|gb|EEL80840.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1271] gi|324327841|gb|ADY23101.1| cytochrome c oxidase, subunit IVB [Bacillus thuringiensis serovar finitimus YBT-020] Length = 110 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MKHQVITFALMIFLTLVAFAAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + S + + ++ + F+ +W+ Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110 >gi|57650251|ref|YP_185931.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus COL] gi|87161285|ref|YP_493658.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194755|ref|YP_499551.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus NCTC 8325] gi|257795210|ref|ZP_05644189.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A9781] gi|269202669|ref|YP_003281938.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus ED98] gi|57284437|gb|AAW36531.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus COL] gi|87127259|gb|ABD21773.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202313|gb|ABD30123.1| quinol oxidase, subunit IV, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|257789182|gb|EEV27522.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A9781] gi|262074959|gb|ACY10932.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus ED98] gi|283470269|emb|CAQ49480.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus ST398] gi|302750883|gb|ADL65060.1| putative quinol oxidase polypeptide IV QoxD [Staphylococcus aureus subsp. aureus str. JKD6008] gi|312829452|emb|CBX34294.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus ECT-R 2] gi|323438881|gb|EGA96617.1| quinol oxidase polypeptide IV [Staphylococcus aureus O11] gi|323441726|gb|EGA99370.1| quinol oxidase polypeptide IV [Staphylococcus aureus O46] gi|329313727|gb|AEB88140.1| Probable quinol oxidase subunit 4 [Staphylococcus aureus subsp. aureus T0131] gi|329727950|gb|EGG64398.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus 21189] gi|329728296|gb|EGG64735.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus 21172] gi|329729021|gb|EGG65433.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus 21193] Length = 92 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 + VGFI S++LT++ + + + I A Q + L+ F+H++ + Sbjct: 2 KHTVGFIASIVLTLLAVYVTLYTSLTFHAKLT-IIFGFAFVQAGLQLLMFMHLTEGKDGR 60 Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLN 106 +IF +++ VG+ WVM + Sbjct: 61 LQTFKVIFALVITLCFVVGTYWVMQGGH 88 >gi|291484041|dbj|BAI85116.1| cytochrome caa3 oxidase subunit IV [Bacillus subtilis subsp. natto BEST195] Length = 110 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LTI+ F V I+L A Q+I L +F+HM+ K Sbjct: 25 MKYQVLSFGLMIGLTIVAFLTVATDGVGSW-FTIPFIILLAAIQVIFQLYYFMHMNQKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + ++ + +F + + FV +W Sbjct: 84 EAPALFLYSGVFVAFITVLAFVTIIW 109 >gi|16078556|ref|NP_389375.1| cytochrome caa3 oxidase subunit IV [Bacillus subtilis subsp. subtilis str. 168] gi|221309362|ref|ZP_03591209.1| cytochrome caa3 oxidase (subunit IV) [Bacillus subtilis subsp. subtilis str. 168] gi|221313689|ref|ZP_03595494.1| cytochrome caa3 oxidase (subunit IV) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318611|ref|ZP_03599905.1| cytochrome caa3 oxidase (subunit IV) [Bacillus subtilis subsp. subtilis str. JH642] gi|221322885|ref|ZP_03604179.1| cytochrome caa3 oxidase (subunit IV) [Bacillus subtilis subsp. subtilis str. SMY] gi|321315254|ref|YP_004207541.1| cytochrome c oxidase subunit IVB [Bacillus subtilis BSn5] gi|117084|sp|P24013|COX4_BACSU RecName: Full=Cytochrome c oxidase subunit 4B; AltName: Full=Caa-3605 subunit 4B; AltName: Full=Cytochrome aa3 subunit 4B; AltName: Full=Cytochrome c oxidase polypeptide IVB gi|39872|emb|CAA38079.1| cytochrome-c oxidase subunit IVB [Bacillus subtilis] gi|2339995|emb|CAB11345.1| cytochrome c oxidase subunit IV, aa3 type [Bacillus subtilis subsp. subtilis str. 168] gi|2633863|emb|CAB13365.1| cytochrome caa3 oxidase (subunit IV) [Bacillus subtilis subsp. subtilis str. 168] gi|320021528|gb|ADV96514.1| cytochrome c oxidase, subunit IVB [Bacillus subtilis BSn5] Length = 110 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LTI+ F V I+L A Q+I L +F+HM+ K Sbjct: 25 MKYQVLSFGLMIGLTIVAFLTVATDGVGSW-FTIPFIILLAAIQVIFQLYYFMHMNQKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + ++ + +F + + FV +W Sbjct: 84 EAPALFLYSGVFVAFITVLAFVTIIW 109 >gi|73663042|ref|YP_301823.1| quinol oxidase polypeptide IV [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642234|sp|Q49WI1|QOX4_STAS1 RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|72495557|dbj|BAE18878.1| quinol oxidase polypeptide IV [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 96 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + VGFI S++LTI+ + + N I A Q V L+ F+H++ Sbjct: 3 TIVKHTVGFIASIVLTILAVFVTLYTSMA-LNAKITIIFGFAFIQAAVQLLMFMHLTESK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106 + ++F II+ I +G+ WVM + Sbjct: 62 DGNLQTFKVLFAIIITLITVIGTYWVMQGGH 92 >gi|257427775|ref|ZP_05604173.1| CyoD protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257274616|gb|EEV06103.1| CyoD protein [Staphylococcus aureus subsp. aureus 65-1322] Length = 92 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 + VGFI S++LT++ + + + I A Q + L+ F+H++ + Sbjct: 2 KHTVGFIASIVLTLLAVYVTLYTSLTFHAKLT-IIFGFAFIQAGLQLLMFMHLTEGKDGR 60 Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLN 106 +IF +++ VG+ WVM + Sbjct: 61 LQTFKVIFALVITLCFVVGTYWVMQGGH 88 >gi|330684199|gb|EGG95943.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus epidermidis VCU121] Length = 96 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + VGFI S++LT++ + + + I A Q V L+ F+H++ Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTSMT-FHAKVTIIFGFAFIQAAVQLLMFMHLTEGK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + +IF II+ VG+ WVM +++ Sbjct: 62 DGRVQSFKVIFAIIITLAIVVGTYWVMQGGHSH 94 >gi|15924048|ref|NP_371582.1| putative quinol oxidase polypeptide IV QoxD [Staphylococcus aureus subsp. aureus Mu50] gi|15926644|ref|NP_374177.1| hypothetical protein SA0910 [Staphylococcus aureus subsp. aureus N315] gi|21282670|ref|NP_645758.1| hypothetical protein MW0941 [Staphylococcus aureus subsp. aureus MW2] gi|49485897|ref|YP_043118.1| putative quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus MSSA476] gi|82750668|ref|YP_416409.1| quinol oxidase polypeptide IV [Staphylococcus aureus RF122] gi|148267550|ref|YP_001246493.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus JH9] gi|150393606|ref|YP_001316281.1| cytochrome aa3 quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus JH1] gi|151221139|ref|YP_001331961.1| quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus str. Newman] gi|156979381|ref|YP_001441640.1| hypothetical protein SAHV_1050 [Staphylococcus aureus subsp. aureus Mu3] gi|161509242|ref|YP_001574901.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141967|ref|ZP_03566460.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316215|ref|ZP_04839428.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731666|ref|ZP_04865831.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253732579|ref|ZP_04866744.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus TCH130] gi|255005845|ref|ZP_05144446.2| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus Mu50-omega] gi|258407081|ref|ZP_05680230.1| quinol oxidase subunit 4 [Staphylococcus aureus A9763] gi|258421827|ref|ZP_05684748.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A9719] gi|258435225|ref|ZP_05688964.1| quinol oxidase polypeptide IV [Staphylococcus aureus A9299] gi|258443320|ref|ZP_05691663.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8115] gi|258446917|ref|ZP_05695070.1| quinol oxidase polypeptide IV [Staphylococcus aureus A6300] gi|258449895|ref|ZP_05697993.1| quinol oxidase polypeptide IV [Staphylococcus aureus A6224] gi|258454993|ref|ZP_05702956.1| quinol oxidase polypeptide IV [Staphylococcus aureus A5937] gi|262049396|ref|ZP_06022269.1| hypothetical protein SAD30_2047 [Staphylococcus aureus D30] gi|262052834|ref|ZP_06025020.1| hypothetical protein SA930_1112 [Staphylococcus aureus 930918-3] gi|282894083|ref|ZP_06302314.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A8117] gi|282925070|ref|ZP_06332731.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A9765] gi|282927279|ref|ZP_06334901.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A10102] gi|284023984|ref|ZP_06378382.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus 132] gi|294848045|ref|ZP_06788792.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A9754] gi|295405862|ref|ZP_06815671.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8819] gi|296277098|ref|ZP_06859605.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus MR1] gi|297208308|ref|ZP_06924738.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245453|ref|ZP_06929324.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8796] gi|300912384|ref|ZP_07129827.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus TCH70] gi|304381387|ref|ZP_07364039.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|81649532|sp|Q6GAF5|QOX4_STAAS RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|81704532|sp|Q7A184|QOX4_STAAW RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|81705893|sp|Q7A6A1|QOX4_STAAN RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|81781806|sp|Q99V39|QOX4_STAAM RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|123548916|sp|Q2YX17|QOX4_STAAB RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|125987514|sp|Q2FI20|QOX4_STAA3 RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|125987515|sp|Q2FZK2|QOX4_STAA8 RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|125987516|sp|Q5HH26|QOX4_STAAC RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|13700859|dbj|BAB42155.1| SA0910 [Staphylococcus aureus subsp. aureus N315] gi|14246828|dbj|BAB57220.1| putative quinol oxidase polypeptide IV QoxD [Staphylococcus aureus subsp. aureus Mu50] gi|21204108|dbj|BAB94806.1| MW0941 [Staphylococcus aureus subsp. aureus MW2] gi|49244340|emb|CAG42768.1| putative quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus MSSA476] gi|82656199|emb|CAI80612.1| probable quinol oxidase polypeptide IV [Staphylococcus aureus RF122] gi|147740619|gb|ABQ48917.1| Cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus JH9] gi|149946058|gb|ABR51994.1| Cytochrome aa3 quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus JH1] gi|150373939|dbj|BAF67199.1| quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus str. Newman] gi|156721516|dbj|BAF77933.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368051|gb|ABX29022.1| possible cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724665|gb|EES93394.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253729357|gb|EES98086.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus TCH130] gi|257841236|gb|EEV65681.1| quinol oxidase subunit 4 [Staphylococcus aureus A9763] gi|257842160|gb|EEV66588.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A9719] gi|257848886|gb|EEV72869.1| quinol oxidase polypeptide IV [Staphylococcus aureus A9299] gi|257851410|gb|EEV75349.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8115] gi|257854249|gb|EEV77199.1| quinol oxidase polypeptide IV [Staphylococcus aureus A6300] gi|257856815|gb|EEV79718.1| quinol oxidase polypeptide IV [Staphylococcus aureus A6224] gi|257862873|gb|EEV85638.1| quinol oxidase polypeptide IV [Staphylococcus aureus A5937] gi|259159282|gb|EEW44340.1| hypothetical protein SA930_1112 [Staphylococcus aureus 930918-3] gi|259162505|gb|EEW47074.1| hypothetical protein SAD30_2047 [Staphylococcus aureus D30] gi|282590968|gb|EFB96043.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A10102] gi|282592668|gb|EFB97676.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A9765] gi|282763569|gb|EFC03698.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A8117] gi|285816736|gb|ADC37223.1| quinol oxidase polypeptide IV QoxD [Staphylococcus aureus 04-02981] gi|294824845|gb|EFG41267.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A9754] gi|294969297|gb|EFG45317.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8819] gi|296887047|gb|EFH25950.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177756|gb|EFH37006.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8796] gi|298694295|gb|ADI97517.1| probable quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus ED133] gi|300886630|gb|EFK81832.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus TCH70] gi|302332668|gb|ADL22861.1| putative quinol oxidase polypeptide IV QoxD [Staphylococcus aureus subsp. aureus JKD6159] gi|304340062|gb|EFM06004.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315130358|gb|EFT86345.1| possible cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus CGS03] gi|315197481|gb|EFU27817.1| possible cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus CGS01] gi|320141126|gb|EFW32973.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus MRSA131] gi|320143183|gb|EFW34973.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus MRSA177] Length = 96 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74 T + VGFI S++LT++ + + + I A Q + L+ F+H++ Sbjct: 2 STIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLT-IIFGFAFVQAGLQLLMFMHLTEG 60 Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106 + +IF +++ VG+ WVM + Sbjct: 61 KDGRLQTFKVIFALVITLCFVVGTYWVMQGGH 92 >gi|223043905|ref|ZP_03613947.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus capitis SK14] gi|314933254|ref|ZP_07840619.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus caprae C87] gi|222442809|gb|EEE48912.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus capitis SK14] gi|313653404|gb|EFS17161.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus caprae C87] Length = 96 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + VGFI S++LT++ + + + I A Q V L+ F+H++ Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTSMT-FHAKVTIIFGFAFIQAAVQLLMFMHLTEGK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + +IF II+ +G+ WVM +++ Sbjct: 62 DGRVQSFKVIFAIIITLAIVIGTYWVMQGGHSH 94 >gi|49483222|ref|YP_040446.1| quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus MRSA252] gi|257425112|ref|ZP_05601538.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus subsp. aureus 55/2053] gi|257430409|ref|ZP_05606791.1| quinol oxidase subunit 4 [Staphylococcus aureus subsp. aureus 68-397] gi|257433112|ref|ZP_05609470.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus E1410] gi|257436010|ref|ZP_05612057.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus M876] gi|258423559|ref|ZP_05686449.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A9635] gi|282903607|ref|ZP_06311495.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus C160] gi|282905377|ref|ZP_06313232.1| cytochrome aa3 quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus Btn1260] gi|282908349|ref|ZP_06316180.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910636|ref|ZP_06318439.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus WBG10049] gi|282913833|ref|ZP_06321620.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus M899] gi|282916309|ref|ZP_06324071.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus D139] gi|282918758|ref|ZP_06326493.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus C427] gi|282923880|ref|ZP_06331556.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus C101] gi|283770121|ref|ZP_06343013.1| quinol oxidase subunit 4 [Staphylococcus aureus subsp. aureus H19] gi|283957804|ref|ZP_06375255.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus A017934/97] gi|293500871|ref|ZP_06666722.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus 58-424] gi|293509827|ref|ZP_06668536.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus M809] gi|293526413|ref|ZP_06671098.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus M1015] gi|295427547|ref|ZP_06820179.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591502|ref|ZP_06950140.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus MN8] gi|81651376|sp|Q6GI26|QOX4_STAAR RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|49241351|emb|CAG40035.1| putative quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus MRSA252] gi|257272088|gb|EEV04220.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus subsp. aureus 55/2053] gi|257278537|gb|EEV09156.1| quinol oxidase subunit 4 [Staphylococcus aureus subsp. aureus 68-397] gi|257281205|gb|EEV11342.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp. aureus E1410] gi|257284292|gb|EEV14412.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus M876] gi|257846260|gb|EEV70284.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A9635] gi|282313852|gb|EFB44244.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus C101] gi|282316568|gb|EFB46942.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus C427] gi|282319749|gb|EFB50097.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus D139] gi|282321901|gb|EFB52225.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus M899] gi|282325241|gb|EFB55550.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus WBG10049] gi|282328014|gb|EFB58296.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330669|gb|EFB60183.1| cytochrome aa3 quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus Btn1260] gi|282595225|gb|EFC00189.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus C160] gi|283460268|gb|EFC07358.1| quinol oxidase subunit 4 [Staphylococcus aureus subsp. aureus H19] gi|283789953|gb|EFC28770.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus A017934/97] gi|290920485|gb|EFD97548.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus M1015] gi|291095876|gb|EFE26137.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus 58-424] gi|291467277|gb|EFF09794.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus M809] gi|295127905|gb|EFG57539.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576388|gb|EFH95104.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus MN8] gi|312438567|gb|ADQ77638.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus TCH60] gi|315193726|gb|EFU24121.1| putative quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus CGS00] Length = 96 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74 T + VGFI S++LT++ + + + I A Q + L+ F+H++ Sbjct: 2 STIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLT-IIFGFAFIQAGLQLLMFMHLTEG 60 Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106 + +IF +++ VG+ WVM + Sbjct: 61 KDGRLQTFKVIFALVITLCFVVGTYWVMQGGH 92 >gi|258451993|ref|ZP_05700009.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A5948] gi|257860208|gb|EEV83040.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus A5948] Length = 96 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74 T + VGFI S++LT++ + + + I A Q + L+ F+H++ Sbjct: 2 STIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLT-IIFGFAFVQAGLQLLMFMHLTEG 60 Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106 + +IF +++ VG+ WVM + Sbjct: 61 KDGRLQTFKVIFALVITLCFIVGTYWVMQGGH 92 >gi|229075697|ref|ZP_04208679.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock4-18] gi|229098411|ref|ZP_04229356.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-29] gi|229117437|ref|ZP_04246813.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock1-3] gi|228666047|gb|EEL21513.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock1-3] gi|228685028|gb|EEL38961.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-29] gi|228707473|gb|EEL59664.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock4-18] Length = 110 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + S + + ++ + F+ +W+ Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110 >gi|47565816|ref|ZP_00236855.1| cytochrome o ubiquinol oxidase, protein CyoD, putative [Bacillus cereus G9241] gi|75762089|ref|ZP_00741995.1| Cytochrome c oxidase polypeptide IVB [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899097|ref|YP_002447508.1| cytochrome c oxidase, subunit IVB [Bacillus cereus G9842] gi|228902447|ref|ZP_04066601.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis IBL 4222] gi|228909767|ref|ZP_04073590.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis IBL 200] gi|228941102|ref|ZP_04103658.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228966962|ref|ZP_04128000.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar sotto str. T04001] gi|228974034|ref|ZP_04134607.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980626|ref|ZP_04140934.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis Bt407] gi|228987084|ref|ZP_04147209.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157518|ref|ZP_04285595.1| Cytochrome c oxidase, subunit IV [Bacillus cereus ATCC 4342] gi|47557096|gb|EAL15425.1| cytochrome o ubiquinol oxidase, protein CyoD, putative [Bacillus cereus G9241] gi|74490423|gb|EAO53733.1| Cytochrome c oxidase polypeptide IVB [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218545539|gb|ACK97933.1| cytochrome c oxidase, subunit IVB [Bacillus cereus G9842] gi|228625968|gb|EEK82718.1| Cytochrome c oxidase, subunit IV [Bacillus cereus ATCC 4342] gi|228772678|gb|EEM21119.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228779094|gb|EEM27353.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis Bt407] gi|228785670|gb|EEM33676.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792696|gb|EEM40260.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar sotto str. T04001] gi|228818555|gb|EEM64624.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228850056|gb|EEM94887.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis IBL 200] gi|228857191|gb|EEN01697.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis IBL 4222] gi|326941713|gb|AEA17609.1| cytochrome c oxidase polypeptide IVB [Bacillus thuringiensis serovar chinensis CT-43] Length = 110 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + S + + ++ + F+ +W+ Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110 >gi|152974414|ref|YP_001373931.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023166|gb|ABS20936.1| Cytochrome aa3 quinol oxidase subunit IV [Bacillus cytotoxicus NVH 391-98] Length = 98 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 2/96 (2%) Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69 N G + GFILSL LT + + + ++ I A+AQ + LV F+ Sbjct: 5 NQAHSGFPWSHVFGFILSLALTFLALYVALYTSLPLSTVLTSII-AMAVAQAALQLVMFM 63 Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 HM E +AM+F+ + + G++W+ + + Sbjct: 64 HMKEG-EGIAQTIAMLFSFFIAVVTVAGTVWIFFSM 98 >gi|30264012|ref|NP_846389.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Ames] gi|47529449|ref|YP_020798.1| cytochrome c oxidase subunit IVB [Bacillus anthracis str. 'Ames Ancestor'] gi|49186851|ref|YP_030103.1| cytochrome c oxidase subunit IVB [Bacillus anthracis str. Sterne] gi|49479382|ref|YP_038003.1| cytochrome c oxidase subunit IV [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141546|ref|YP_085282.1| cytochrome c oxidase, subunit IV [Bacillus cereus E33L] gi|65321336|ref|ZP_00394295.1| COG3125: Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Bacillus anthracis str. A2012] gi|165872200|ref|ZP_02216839.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0488] gi|167633708|ref|ZP_02392032.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0442] gi|167641026|ref|ZP_02399283.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0193] gi|170688777|ref|ZP_02879981.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0465] gi|170705699|ref|ZP_02896162.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0389] gi|177654357|ref|ZP_02936286.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0174] gi|190565970|ref|ZP_03018889.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis Tsiankovskii-I] gi|196035905|ref|ZP_03103307.1| cytochrome c oxidase, subunit IVB [Bacillus cereus W] gi|196038632|ref|ZP_03105940.1| cytochrome c oxidase, subunit IVB [Bacillus cereus NVH0597-99] gi|196045812|ref|ZP_03113041.1| cytochrome c oxidase, subunit IVB [Bacillus cereus 03BB108] gi|218905072|ref|YP_002452906.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH820] gi|225865923|ref|YP_002751301.1| cytochrome c oxidase, subunit IVB [Bacillus cereus 03BB102] gi|227816715|ref|YP_002816724.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. CDC 684] gi|228916578|ref|ZP_04080144.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928988|ref|ZP_04092020.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935256|ref|ZP_04098082.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947660|ref|ZP_04109950.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092990|ref|ZP_04224121.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-42] gi|229123462|ref|ZP_04252661.1| Cytochrome c oxidase, subunit IV [Bacillus cereus 95/8201] gi|229186181|ref|ZP_04313350.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BGSC 6E1] gi|229604459|ref|YP_002868241.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0248] gi|254683708|ref|ZP_05147568.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. CNEVA-9066] gi|254721543|ref|ZP_05183332.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A1055] gi|254736053|ref|ZP_05193759.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Western North America USA6153] gi|254743944|ref|ZP_05201627.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Kruger B] gi|254754277|ref|ZP_05206312.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Vollum] gi|254758032|ref|ZP_05210059.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Australia 94] gi|301055432|ref|YP_003793643.1| cytochrome c oxidase subunit IV [Bacillus anthracis CI] gi|30258657|gb|AAP27875.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Ames] gi|47504597|gb|AAT33273.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. 'Ames Ancestor'] gi|49180778|gb|AAT56154.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Sterne] gi|49330938|gb|AAT61584.1| cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51975015|gb|AAU16565.1| cytochrome c oxidase, subunit IV [Bacillus cereus E33L] gi|164712147|gb|EDR17685.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0488] gi|167511076|gb|EDR86465.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0193] gi|167531114|gb|EDR93801.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0442] gi|170129239|gb|EDS98103.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0389] gi|170667293|gb|EDT18052.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0465] gi|172080847|gb|EDT65928.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0174] gi|190562889|gb|EDV16855.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis Tsiankovskii-I] gi|195991554|gb|EDX55520.1| cytochrome c oxidase, subunit IVB [Bacillus cereus W] gi|196023252|gb|EDX61930.1| cytochrome c oxidase, subunit IVB [Bacillus cereus 03BB108] gi|196030355|gb|EDX68954.1| cytochrome c oxidase, subunit IVB [Bacillus cereus NVH0597-99] gi|218538510|gb|ACK90908.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH820] gi|225788317|gb|ACO28534.1| cytochrome c oxidase, subunit IVB [Bacillus cereus 03BB102] gi|227005660|gb|ACP15403.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. CDC 684] gi|228597357|gb|EEK55008.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BGSC 6E1] gi|228659949|gb|EEL15590.1| Cytochrome c oxidase, subunit IV [Bacillus cereus 95/8201] gi|228690361|gb|EEL44147.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-42] gi|228812180|gb|EEM58511.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824421|gb|EEM70227.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830795|gb|EEM76400.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843157|gb|EEM88239.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229268867|gb|ACQ50504.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0248] gi|300377601|gb|ADK06505.1| cytochrome c oxidase, subunit IV [Bacillus cereus biovar anthracis str. CI] Length = 110 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + S + + ++ + F+ +W+ Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110 >gi|70726905|ref|YP_253819.1| hypothetical protein SH1904 [Staphylococcus haemolyticus JCSC1435] gi|123659872|sp|Q4L562|QOX4_STAHJ RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|68447629|dbj|BAE05213.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 96 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + VGFI S++LT++ + + I A Q V L+ F+H++ Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTNMTFHAKTT-IIFGFAFIQAAVQLLMFMHLTEGK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + +IF II+ + +G+ WVM +++ Sbjct: 62 DGQVQSFKVIFAIIITLVTVIGTYWVMQGGHSH 94 >gi|239826489|ref|YP_002949113.1| cytochrome C oxidase subunit IV [Geobacillus sp. WCH70] gi|239806782|gb|ACS23847.1| cytochrome c oxidase, subunit IV [Geobacillus sp. WCH70] Length = 110 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F+L ++ T+I F V F I+L A+ Q++ L +F+HMS K Sbjct: 25 MKHQVISFVLMILFTLIAFTAVGYDKFSPW-FSVPFILLLAVVQVLFQLYYFMHMSHKGH 83 Query: 77 DGWSIMAMIFTIIMVAICFVGSMW 100 + ++ ++ I+VA ++W Sbjct: 84 EMPAL--FMYGGILVAFV---TIW 102 >gi|205373049|ref|ZP_03225855.1| CtaF [Bacillus coahuilensis m4-4] Length = 109 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + +V F L + LT++ F V GF + + I+L A+ Q+I L +F+HMS K Sbjct: 25 MRMQVVTFALMIFLTLVAFIAVAGGF--SEWFIFPFILLLAVIQVIFQLYYFMHMSHKGH 82 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + ++ + F + + F+ +W+ Sbjct: 83 EAPALFLYSGAFVAFLTVLAFITIVWI 109 >gi|317129343|ref|YP_004095625.1| cytochrome C oxidase subunit IV [Bacillus cellulosilyticus DSM 2522] gi|315474291|gb|ADU30894.1| cytochrome C oxidase subunit IV [Bacillus cellulosilyticus DSM 2522] Length = 116 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 3/83 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 ++ L+ F+ + LT + F + I+L A+ Q+++ L F+H++ + Sbjct: 28 MRKQLISFVFMIFLTSMAFISIASDAI-PATFAIPFILLLAVIQVVLQLYVFMHLNERGN 86 Query: 77 DGWSIMAMIFTIIMVAICFVGSM 99 +IM I+T +++AI V ++ Sbjct: 87 GWTNIM--IWTGVLIAILTVATL 107 >gi|242242362|ref|ZP_04796807.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis W23144] gi|242234169|gb|EES36481.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis W23144] gi|319401615|gb|EFV89825.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus epidermidis FRI909] Length = 96 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + VGFI S++LT++ + + + I A Q + L+ F+H++ Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTNMT-FHAKVTIIFGFAFIQAALQLLMFMHLTEGK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106 + +IF II+ I +G+ WVM + Sbjct: 62 DGRLQSFKVIFAIIITLITVIGTYWVMQGGH 92 >gi|289551130|ref|YP_003472034.1| quinol oxidase polypeptide IV QoxD [Staphylococcus lugdunensis HKU09-01] gi|315658631|ref|ZP_07911501.1| quinol oxidase subunit IV [Staphylococcus lugdunensis M23590] gi|289180662|gb|ADC87907.1| quinol oxidase polypeptide IV QoxD [Staphylococcus lugdunensis HKU09-01] gi|315496262|gb|EFU84587.1| quinol oxidase subunit IV [Staphylococcus lugdunensis M23590] Length = 96 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + +GFI S++LT++ + + + I A Q + L+ F+H++ Sbjct: 3 TIVKHTIGFIASIVLTLLAVFVTLYTTLT-FHAKVTIIFGFAFIQAALQLLMFMHLTEGK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + +IF II+ + +G+ WVM +++ Sbjct: 62 DGQVQSFKVIFAIIITLVTVIGTYWVMQGGHSH 94 >gi|228474443|ref|ZP_04059178.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus hominis SK119] gi|314936751|ref|ZP_07844098.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus hominis subsp. hominis C80] gi|228271802|gb|EEK13149.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus hominis SK119] gi|313655370|gb|EFS19115.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus hominis subsp. hominis C80] Length = 96 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + VGFI S++LT++ + + I A Q + L+ F+H++ Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTNMTFHAKTT-IIFGFAFIQAALQLLMFMHLTEGK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106 + +IF II+ I +G+ WVM + Sbjct: 62 DGRLQSAKVIFAIIITLITVIGTYWVMQGGH 92 >gi|228922692|ref|ZP_04085991.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836966|gb|EEM82308.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 110 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MRHQVITFALMIFLTLVAFVAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + S + + ++ + F+ +W+ Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110 >gi|242373278|ref|ZP_04818852.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis M23864:W1] gi|242348988|gb|EES40590.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis M23864:W1] Length = 96 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + VGFI S++LT++ + + + I A Q V L+ F+H++ Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTSMT-FHAKVTIIFGFAFIQAAVQLLMFMHLTEGR 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + +IF II+ +G+ WVM +++ Sbjct: 62 DGRLQSFKVIFAIIITLAIVIGTYWVMQGGHSH 94 >gi|229019143|ref|ZP_04175977.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1273] gi|229025386|ref|ZP_04181804.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1272] gi|228735971|gb|EEL86548.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1272] gi|228742159|gb|EEL92325.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1273] Length = 110 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAFPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + S + + ++ + F+ +W+ Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110 >gi|149181711|ref|ZP_01860203.1| CtaF [Bacillus sp. SG-1] gi|148850559|gb|EDL64717.1| CtaF [Bacillus sp. SG-1] Length = 110 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + +V F L + LT++ F V G K + I+L A+ Q+I L +F+HMS K Sbjct: 26 MRMQVVSFALMIFLTLVAFVAV--GGGFSKWFVVPFILLLAVVQLIFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + ++ + + + F+ +W+ Sbjct: 84 EAPALFLYSGALVAFITVLTFLTIVWI 110 >gi|27467674|ref|NP_764311.1| putative quinol oxidase polypeptide IV QoxD [Staphylococcus epidermidis ATCC 12228] gi|57866535|ref|YP_188228.1| quinol oxidase, subunit IV [Staphylococcus epidermidis RP62A] gi|251810511|ref|ZP_04824984.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis BCM-HMP0060] gi|282876584|ref|ZP_06285449.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus epidermidis SK135] gi|293366954|ref|ZP_06613629.1| quinol oxidase subunit IV [Staphylococcus epidermidis M23864:W2(grey)] gi|81675020|sp|Q5HQB2|QOX4_STAEQ RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|81842949|sp|Q8CPP9|QOX4_STAES RecName: Full=Probable quinol oxidase subunit 4; AltName: Full=Quinol oxidase polypeptide IV gi|27315218|gb|AAO04353.1|AE016746_143 putative quinol oxidase polypeptide IV QoxD [Staphylococcus epidermidis ATCC 12228] gi|57637193|gb|AAW53981.1| quinol oxidase, subunit IV [Staphylococcus epidermidis RP62A] gi|251805922|gb|EES58579.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis BCM-HMP0060] gi|281294672|gb|EFA87201.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus epidermidis SK135] gi|291318929|gb|EFE59300.1| quinol oxidase subunit IV [Staphylococcus epidermidis M23864:W2(grey)] gi|329732860|gb|EGG69206.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus epidermidis VCU144] gi|329734218|gb|EGG70534.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus epidermidis VCU028] gi|329735521|gb|EGG71809.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus epidermidis VCU045] Length = 96 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + VGFI S++LT++ + + + I A Q + L+ F+H++ Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTNMT-FHAKVTIIFGFAFIQAALQLLMFMHLTEGK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106 + +IF II+ + +G+ WVM + Sbjct: 62 DGRLQSFKVIFAIIITLVTVIGTYWVMQGGH 92 >gi|42783036|ref|NP_980283.1| cytochrome c oxidase, subunit IVB [Bacillus cereus ATCC 10987] gi|42738963|gb|AAS42891.1| cytochrome c oxidase, subunit IVB [Bacillus cereus ATCC 10987] Length = 110 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAYPKTFSPIFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + S + + ++ + F+ +W+ Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110 >gi|296331067|ref|ZP_06873541.1| cytochrome c oxidase, subunit IVB [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674222|ref|YP_003865894.1| cytochrome c oxidase, subunit IVB [Bacillus subtilis subsp. spizizenii str. W23] gi|296151711|gb|EFG92586.1| cytochrome c oxidase, subunit IVB [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412466|gb|ADM37585.1| cytochrome c oxidase, subunit IVB [Bacillus subtilis subsp. spizizenii str. W23] Length = 110 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LTI+ F V I+L A Q+I L +F+HM+ K Sbjct: 25 MKYQVLSFGLMIGLTIVAFLTVATDGVGSW-FTIPFIILLAAIQVIFQLYYFMHMNQKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + ++ + +F + + FV +W Sbjct: 84 EAPAMFLYSGMFVAFITVLAFVTIIW 109 >gi|319649711|ref|ZP_08003867.1| CtaF protein [Bacillus sp. 2_A_57_CT2] gi|317398873|gb|EFV79555.1| CtaF protein [Bacillus sp. 2_A_57_CT2] Length = 111 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LTI+ F F + I++ AI Q+I L +F+HMS K Sbjct: 26 MKHQVITFALMIFLTIVAFVAAGYEGFSGW-FIVPFILILAIVQVIFQLYYFMHMSHKGH 84 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + ++ + + I F+ +W Sbjct: 85 EAPALFLYSGALVGFITIIAFLTVIW 110 >gi|224476168|ref|YP_002633774.1| putative quinol oxidase polypeptide IV [Staphylococcus carnosus subsp. carnosus TM300] gi|222420775|emb|CAL27589.1| putative quinol oxidase polypeptide IV [Staphylococcus carnosus subsp. carnosus TM300] Length = 96 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + VGFI S++LT++ + + N I A Q + L+ F+H++ Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTSLT-LNAKITIIFGFAFIQAALQLLMFMHLTEGK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + +IF II+ + +GS WVM ++ M Sbjct: 62 DGQAQSFKVIFAIIITLVTVIGSYWVMVGGHSAHM 96 >gi|172057994|ref|YP_001814454.1| cytochrome C oxidase subunit IV [Exiguobacterium sibiricum 255-15] gi|171990515|gb|ACB61437.1| cytochrome C oxidase subunit IV [Exiguobacterium sibiricum 255-15] Length = 109 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 3/83 (3%) Query: 20 CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGW 79 L F L + LT+I FG VM I + AI Q+ + L F+HM+ K Sbjct: 28 QLTSFALMIFLTLIAFGAVMAELMPHWAAGGFLI-IMAIVQVYLQLYMFMHMNNKGNTWV 86 Query: 80 SIMAM--IFTIIMVAICFVGSMW 100 +M IF + + +W Sbjct: 87 KVMMALGIFVALTIVATLRLLIW 109 >gi|157692165|ref|YP_001486627.1| cytochrome-c oxidase subunit IV [Bacillus pumilus SAFR-032] gi|194014575|ref|ZP_03053192.1| cytochrome c oxidase, subunit IV [Bacillus pumilus ATCC 7061] gi|157680923|gb|ABV62067.1| cytochrome-c oxidase subunit IV [Bacillus pumilus SAFR-032] gi|194013601|gb|EDW23166.1| cytochrome c oxidase, subunit IV [Bacillus pumilus ATCC 7061] Length = 109 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K L+ F L + LT + F + + I+L A+ Q+ L +F+HM+ K Sbjct: 24 MKHQLISFGLMIGLTFVAFLTIASEDVGNW-FAVPFILLLAVIQVAFQLYYFMHMNQKGH 82 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + ++ + +F + + F+ +W Sbjct: 83 ETPALFLYSGVFVAFITVLAFLTIIW 108 >gi|52080095|ref|YP_078886.1| cytochrome caa3 oxidase subunit IV [Bacillus licheniformis ATCC 14580] gi|52785469|ref|YP_091298.1| CtaF [Bacillus licheniformis ATCC 14580] gi|319646130|ref|ZP_08000360.1| CtaF protein [Bacillus sp. BT1B_CT2] gi|52003306|gb|AAU23248.1| cytochrome caa3 oxidase (subunit IV) [Bacillus licheniformis ATCC 14580] gi|52347971|gb|AAU40605.1| CtaF [Bacillus licheniformis ATCC 14580] gi|317391880|gb|EFV72677.1| CtaF protein [Bacillus sp. BT1B_CT2] Length = 109 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + ++ F L + LTI+ F V I+L A+ Q+ L +F+HMS + Sbjct: 25 MRYQVISFGLMIGLTIVAFLTVASDA--GVWFTVPFILLLAVIQVAFQLYYFMHMSQRGH 82 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + ++ + + + + FV +W Sbjct: 83 EAPTLFLYSGVLVAFVTVLAFVTLIW 108 >gi|206971011|ref|ZP_03231962.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH1134] gi|218236053|ref|YP_002368741.1| cytochrome c oxidase, subunit IVB [Bacillus cereus B4264] gi|228954217|ref|ZP_04116245.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960202|ref|ZP_04121859.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar pakistani str. T13001] gi|229047626|ref|ZP_04193215.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH676] gi|229071440|ref|ZP_04204662.1| Cytochrome c oxidase, subunit IV [Bacillus cereus F65185] gi|229081193|ref|ZP_04213703.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock4-2] gi|229111411|ref|ZP_04240963.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock1-15] gi|229129218|ref|ZP_04258191.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-Cer4] gi|229146512|ref|ZP_04274883.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST24] gi|229152139|ref|ZP_04280333.1| Cytochrome c oxidase, subunit IV [Bacillus cereus m1550] gi|229180216|ref|ZP_04307560.1| Cytochrome c oxidase, subunit IV [Bacillus cereus 172560W] gi|229192149|ref|ZP_04319117.1| Cytochrome c oxidase, subunit IV [Bacillus cereus ATCC 10876] gi|296504435|ref|YP_003666135.1| cytochrome c oxidase polypeptide IVB [Bacillus thuringiensis BMB171] gi|206733783|gb|EDZ50954.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH1134] gi|218164010|gb|ACK64002.1| cytochrome c oxidase, subunit IVB [Bacillus cereus B4264] gi|228591356|gb|EEK49207.1| Cytochrome c oxidase, subunit IV [Bacillus cereus ATCC 10876] gi|228603425|gb|EEK60902.1| Cytochrome c oxidase, subunit IV [Bacillus cereus 172560W] gi|228631331|gb|EEK87966.1| Cytochrome c oxidase, subunit IV [Bacillus cereus m1550] gi|228637145|gb|EEK93604.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST24] gi|228654455|gb|EEL10320.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-Cer4] gi|228672027|gb|EEL27319.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock1-15] gi|228702237|gb|EEL54713.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock4-2] gi|228711731|gb|EEL63684.1| Cytochrome c oxidase, subunit IV [Bacillus cereus F65185] gi|228723720|gb|EEL75076.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH676] gi|228799470|gb|EEM46430.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805537|gb|EEM52128.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|296325487|gb|ADH08415.1| cytochrome c oxidase polypeptide IVB [Bacillus thuringiensis BMB171] Length = 110 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MRHQVITFALMIFLTLVAFVAVAYPKTFSPIFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + S + + ++ + F+ +W+ Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110 >gi|229162875|ref|ZP_04290832.1| Cytochrome c oxidase, subunit IV [Bacillus cereus R309803] gi|228620757|gb|EEK77626.1| Cytochrome c oxidase, subunit IV [Bacillus cereus R309803] Length = 110 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAYPKTFSPIFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIMAMIFTIIMVAICFVG 97 + S +++ +++ + + Sbjct: 84 EAASF--FLYSGLLIGLITIL 102 >gi|222150985|ref|YP_002560138.1| hypothetical protein MCCL_0735 [Macrococcus caseolyticus JCSC5402] gi|222120107|dbj|BAH17442.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 115 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 8/86 (9%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + + F + + LT + F +V G L K + ++L A+ Q+I+ +F+HM K Sbjct: 26 MRMQVTTFAIMIFLTFVAFAMVAAG--LSKEFVIPAVLLLALIQVILQFYYFMHMKHKGH 83 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVM 102 + ++ + GS VM Sbjct: 84 GTAQLF------MLTGLFIAGSFIVM 103 >gi|229104503|ref|ZP_04235170.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-28] gi|228678945|gb|EEL33155.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-28] Length = 100 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 14 MKHQVITFALMIFLTLVAFVAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 73 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + S + + ++ + F+ +W+ Sbjct: 74 EAASFFLYSGLLIGLITILAFMTIVWI 100 >gi|138894620|ref|YP_001125073.1| cytochrome caa3-type oxidase IV [Geobacillus thermodenitrificans NG80-2] gi|196247771|ref|ZP_03146473.1| cytochrome c oxidase, subunit IV [Geobacillus sp. G11MC16] gi|1841880|dbj|BAA11114.1| cytochrome c oxidase subunit IV [Geobacillus stearothermophilus] gi|134266133|gb|ABO66328.1| Cytochrome caa3-type oxidase IV [Geobacillus thermodenitrificans NG80-2] gi|196212555|gb|EDY07312.1| cytochrome c oxidase, subunit IV [Geobacillus sp. G11MC16] Length = 110 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + ++ F+L ++LT+I F V F + I+L A Q+ L +F+HMS K Sbjct: 25 MRHQVIAFVLMILLTLIAFAAVGYEEFSHW-FVIPFILLLAGVQVAFQLYYFMHMSHKGH 83 Query: 77 DGWSIMAMIFTIIMVAICFVGS 98 + ++ ++M+ + + S Sbjct: 84 EFPALFIYGGVLVMLVLVWAFS 105 >gi|311029887|ref|ZP_07707977.1| cytochrome c oxidase, subunit IVB [Bacillus sp. m3-13] Length = 110 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 4/86 (4%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K +V F+L + LT++ F V G + K + I+L AI Q I L +F+HM+ K Sbjct: 26 MKYQVVSFVLMIFLTLLAFLAV--GAEMSKYFIVPFIILMAIVQCIFQLYYFMHMNHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + ++ + + ++ + F +W Sbjct: 84 ETPALFLYSGLAVGLITILAFTTIIW 109 >gi|152976355|ref|YP_001375872.1| cytochrome c oxidase subunit IV [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025107|gb|ABS22877.1| Cytochrome c oxidase subunit IV bacillaceae [Bacillus cytotoxicus NVH 391-98] Length = 112 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LTI+ F V I+L A+ Q+I L +F+HMS K Sbjct: 26 MKHQVITFGLMIFLTIVAFVAVAYPKTFSPIFSVPFILLLAVVQVIFQLYYFMHMSHKGH 85 Query: 77 DGWSIM 82 + S Sbjct: 86 EAASFF 91 >gi|30022029|ref|NP_833660.1| cytochrome c oxidase polypeptide IVB [Bacillus cereus ATCC 14579] gi|29897585|gb|AAP10861.1| Cytochrome c oxidase polypeptide IVB [Bacillus cereus ATCC 14579] Length = 110 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MRHQVITFALMIFLTLVAFVAVAYPKTFSPIFSVPFILLLAVVQVIFQLCYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101 + S + + ++ + F+ +W+ Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110 >gi|229086505|ref|ZP_04218677.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-44] gi|228696822|gb|EEL49635.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-44] Length = 112 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + ++ F L + LTI+ F V I+L A+ Q+I L +F+HMS K Sbjct: 26 MRHQVITFGLMIFLTIVAFAAVAYPKTFSPLFSVPFILLLAVVQVIFQLYYFMHMSHKGH 85 Query: 77 DGWSIM 82 + S Sbjct: 86 EAASFF 91 >gi|255020825|ref|ZP_05292881.1| hypothetical protein ACA_1047 [Acidithiobacillus caldus ATCC 51756] gi|254969616|gb|EET27122.1| hypothetical protein ACA_1047 [Acidithiobacillus caldus ATCC 51756] Length = 87 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 3/89 (3%) Query: 31 TIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIM 90 +I +V ++ I +CA I + F LH+ + W+ ++++ I + Sbjct: 1 MLIATFLVSSHAAPPFGLLL-VITVCAGIATIAQIYFLLHIDISEHNIWNTVSLVAFIPL 59 Query: 91 VAICFVGSMWVMYHLNNNMMSMEGMRSIH 119 + + W+ L M M +H Sbjct: 60 FVLTIGLTWWMFSQLYLRTMPP--MPGMH 86 >gi|163941680|ref|YP_001646564.1| cytochrome c oxidase subunit IV [Bacillus weihenstephanensis KBAB4] gi|229013146|ref|ZP_04170290.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides DSM 2048] gi|229061604|ref|ZP_04198946.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH603] gi|229134749|ref|ZP_04263558.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST196] gi|229168680|ref|ZP_04296402.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH621] gi|163863877|gb|ABY44936.1| Cytochrome c oxidase subunit IV bacillaceae [Bacillus weihenstephanensis KBAB4] gi|228614836|gb|EEK71939.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH621] gi|228648795|gb|EEL04821.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST196] gi|228717695|gb|EEL69348.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH603] gi|228748096|gb|EEL97957.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides DSM 2048] Length = 110 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K +V F L + LT++ F V I+L A+ Q+I L +F+HMS K Sbjct: 24 MKHQVVTFSLMIFLTLVAFAAVAYPKTFSPIFSVPFILLLAVIQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIM 82 + S Sbjct: 84 EAASFF 89 >gi|295399680|ref|ZP_06809661.1| cytochrome c oxidase, subunit IV [Geobacillus thermoglucosidasius C56-YS93] gi|294978083|gb|EFG53680.1| cytochrome c oxidase, subunit IV [Geobacillus thermoglucosidasius C56-YS93] Length = 110 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L ++LT+I F V F I+L AI Q++ L +F+HMS K Sbjct: 25 MKHQVISFTLMILLTLISFFAVGYDKFSHW-FSVPFILLLAIVQVMFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + ++ + +F + F +W Sbjct: 84 EIPAMFMYSGMFVTFLTVWAFATIVW 109 >gi|228989831|ref|ZP_04149811.1| Quinol oxidase, subunit IV [Bacillus pseudomycoides DSM 12442] gi|228996022|ref|ZP_04155677.1| Quinol oxidase, subunit IV [Bacillus mycoides Rock3-17] gi|229003638|ref|ZP_04161453.1| Quinol oxidase, subunit IV [Bacillus mycoides Rock1-4] gi|228757604|gb|EEM06834.1| Quinol oxidase, subunit IV [Bacillus mycoides Rock1-4] gi|228763718|gb|EEM12610.1| Quinol oxidase, subunit IV [Bacillus mycoides Rock3-17] gi|228769978|gb|EEM18561.1| Quinol oxidase, subunit IV [Bacillus pseudomycoides DSM 12442] Length = 101 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74 G + GFILSL LT + + + I+ I++ A+AQ + V F+HM+ Sbjct: 13 GFPWSHVFGFILSLALTFLAVYVTLYTSLPLSTILTA-ILVMAVAQAALQFVMFMHMTEG 71 Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 E + ++F + A+ VG++W+ + + Sbjct: 72 -EGVIQTITIVFHFFIAAVTVVGTVWIFFSM 101 >gi|212639691|ref|YP_002316211.1| cytochrome caa3 oxidase subunit IV [Anoxybacillus flavithermus WK1] gi|212561171|gb|ACJ34226.1| Cytochrome caa3 oxidase (subunit IV) [Anoxybacillus flavithermus WK1] Length = 110 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L + LT+I F V F I+L A+ Q+I L +F+HMS K Sbjct: 25 MKHQIISFTLMIFLTLIAFFAVGYEGFSAW-FSVPFILLLAVVQVIFQLYYFMHMSHKGH 83 Query: 77 DGWSIMAM--IFTIIMVAICFVGSMWV 101 + ++ + + F+ +W+ Sbjct: 84 ELPALFIYGGVAVAFVTIWAFLTVVWI 110 >gi|228992677|ref|ZP_04152603.1| Cytochrome c oxidase, subunit IV [Bacillus pseudomycoides DSM 12442] gi|228998721|ref|ZP_04158308.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides Rock3-17] gi|229006223|ref|ZP_04163909.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides Rock1-4] gi|228755064|gb|EEM04423.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides Rock1-4] gi|228761189|gb|EEM10148.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides Rock3-17] gi|228767009|gb|EEM15646.1| Cytochrome c oxidase, subunit IV [Bacillus pseudomycoides DSM 12442] Length = 112 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + ++ F L + LTI+ F V I+L A+ Q+I L +F+HMS K Sbjct: 26 MRHQVITFGLMIFLTIVAFVAVAYPKTFSPLFSVPFILLLAVVQVIFQLYYFMHMSHKGH 85 Query: 77 DGWSIM 82 + + Sbjct: 86 EAATFF 91 >gi|461802|sp|Q03440|COX4_BACP3 RecName: Full=Cytochrome c oxidase subunit 4B; AltName: Full=Cytochrome aa3 subunit 4B; AltName: Full=Cytochrome c oxidase polypeptide IVB gi|77451|pir||JX0143 cytochrome-c oxidase (EC 1.9.3.1) chain IV precursor - thermophilic bacterium PS-3 gi|217152|dbj|BAA03048.1| cytochrome c oxidase subunit 4 [Bacillus sp. PS3] Length = 110 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + ++ F+L ++LT+I F V F + I+L A Q+ L +F+HMS K Sbjct: 25 MRHQMIAFVLMILLTLIAFAAVGYEEFSHW-FVVPFILLLAAVQVAFQLYYFMHMSHKGH 83 Query: 77 DGWSIMAMIFTIIMVAICFVGS 98 + ++ +M+ + + + Sbjct: 84 EFPAMFIYGGVAVMLLLVWAFT 105 >gi|261419282|ref|YP_003252964.1| cytochrome C oxidase subunit IV [Geobacillus sp. Y412MC61] gi|297530748|ref|YP_003672023.1| cytochrome C oxidase subunit IV [Geobacillus sp. C56-T3] gi|319766098|ref|YP_004131599.1| cytochrome C oxidase subunit IV [Geobacillus sp. Y412MC52] gi|261375739|gb|ACX78482.1| cytochrome c oxidase, subunit IV [Geobacillus sp. Y412MC61] gi|297254000|gb|ADI27446.1| cytochrome c oxidase, subunit IV [Geobacillus sp. C56-T3] gi|317110964|gb|ADU93456.1| cytochrome c oxidase, subunit IV [Geobacillus sp. Y412MC52] Length = 110 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + ++ F+L ++LT+I F V F + I+L A Q+ L +F+HMS K Sbjct: 25 MRHQMIAFVLMILLTLIAFAAVGYEEFSHW-FVVPFILLLAAVQVAFQLYYFMHMSHKGH 83 Query: 77 DGWSIMAMIFTIIMVAICFVGS 98 + ++ +M+ + + + Sbjct: 84 EFPAMFIYGGVAVMLLLVWAFT 105 >gi|56419620|ref|YP_146938.1| cytochrome c oxidase subunit IV [Geobacillus kaustophilus HTA426] gi|56379462|dbj|BAD75370.1| cytochrome c oxidase subunit IV [Geobacillus kaustophilus HTA426] Length = 110 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + ++ F+L ++LT+I F V F + I+L A Q+ L +F+HMS K Sbjct: 25 MRHQMIAFVLMILLTLIAFAAVGYEEFSHW-FVVPFILLLAAVQVAFQLYYFMHMSHKGH 83 Query: 77 DGWSIMAMIFTIIMVAICFVGS 98 + ++ +M+ + + + Sbjct: 84 EFPAMFIYGGVAVMLLLVWAFT 105 >gi|295703492|ref|YP_003596567.1| cytochrome c oxidase subunit IV [Bacillus megaterium DSM 319] gi|294801151|gb|ADF38217.1| cytochrome c oxidase, subunit IV [Bacillus megaterium DSM 319] Length = 110 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F + L LT+I F V + F + IVL A+ Q+I L +F+HM+ K Sbjct: 26 MKMQVISFGMMLFLTLIAFFAVYQEF--SGWYIMPVIVLLAVVQVIFQLYYFMHMNHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + + + ++ + FV +W Sbjct: 84 TIPAFFLYSGVLVALLTILAFVTIIW 109 >gi|251799267|ref|YP_003013998.1| cytochrome C oxidase subunit IV [Paenibacillus sp. JDR-2] gi|247546893|gb|ACT03912.1| cytochrome C oxidase subunit IV [Paenibacillus sp. JDR-2] Length = 105 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 K+ +V FI S++LT+I F V G + + + + ++ CAI Q+ V + F++HM + Sbjct: 19 GPKKHIVAFIFSILLTLIAFAAVAGGEI-NTDFIYIILIGCAILQVFVQMAFWMHMKDRG 77 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMW 100 I + ++ + W Sbjct: 78 HTFAIIGILFGVFVVFTCVIMAEYW 102 >gi|294498141|ref|YP_003561841.1| cytochrome c oxidase subunit IV [Bacillus megaterium QM B1551] gi|294348078|gb|ADE68407.1| cytochrome c oxidase, subunit IV [Bacillus megaterium QM B1551] Length = 110 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K +V F + L LT+I F V + F + IVL A+ Q+I L +F+HM+ K Sbjct: 26 MKMQVVSFAMMLFLTLIAFFAVYQEF--SGWYIMPVIVLLAVVQVIFQLYYFMHMNHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + + + ++ + FV +W Sbjct: 84 TIPAFFLYSGVLVALLTILAFVTIIW 109 >gi|15615175|ref|NP_243478.1| cytochrome caa3 oxidase (subunit IV) [Bacillus halodurans C-125] gi|10175233|dbj|BAB06331.1| cytochrome caa3 oxidase (subunit IV) [Bacillus halodurans C-125] Length = 114 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 ++ + F L + LTII F V + ++L A+ Q + L+FF+HM K Sbjct: 26 IRRQFIVFALMIFLTIIAFLTVAADVV-PRTFAIPFVLLLALIQFTLQLLFFMHMKDKDH 84 Query: 77 DGWSIMAMIFTIIMVAICFVGSM 99 ++ + + V + Sbjct: 85 GWANVFMITGIFVTVPTIAALML 107 >gi|312111801|ref|YP_003990117.1| cytochrome C oxidase subunit IV [Geobacillus sp. Y4.1MC1] gi|311216902|gb|ADP75506.1| cytochrome c oxidase, subunit IV [Geobacillus sp. Y4.1MC1] Length = 110 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++ F L ++LT+I F V F I+L AI Q++ L +F+HMS K Sbjct: 25 MKHQVISFTLMILLTLISFFAVGCDKFSHW-FSVPFILLLAIVQVMFQLYYFMHMSHKGH 83 Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100 + ++ + +F + F +W Sbjct: 84 EIPAMFMYSGMFVTFLTVWAFATIVW 109 >gi|23098895|ref|NP_692361.1| cytochrome c oxidase subunit IV [Oceanobacillus iheyensis HTE831] gi|22777122|dbj|BAC13396.1| cytochrome c oxidase subunit IV (aa3 type) [Oceanobacillus iheyensis HTE831] Length = 106 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K+ +V F L + T+I F VM DK + +++ A+ QI +F+HM K Sbjct: 22 MKKQIVTFALMIFFTLIAFFAVMLEI--DKMFVIPLLLILAVVQIAFQFFYFMHMKDKGH 79 Query: 77 DGWSIMA---MIFTIIMVAICFVGSMW 100 + S + + T++++ V + W Sbjct: 80 EVPSQIIYGGIFVTMLVILTFTVITWW 106 >gi|218288765|ref|ZP_03493028.1| cytochrome C oxidase subunit IV [Alicyclobacillus acidocaldarius LAA1] gi|218241123|gb|EED08299.1| cytochrome C oxidase subunit IV [Alicyclobacillus acidocaldarius LAA1] Length = 106 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 Q + G++LSL+LT I F +V ++ L + L A+ ++V L F+H++ Sbjct: 17 QYVTGYVLSLVLTAIAFVLVAFHVLPVPLLLVLLMALAALQ-VLVQLFLFMHVTEGDGSR 75 Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102 +AM + +GS+W+M Sbjct: 76 VKGLAMGLGLFFTLAIALGSIWIM 99 >gi|255025410|ref|ZP_05297396.1| hypothetical protein LmonocytFSL_02104 [Listeria monocytogenes FSL J2-003] Length = 77 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N N G + +VGF LS++LT++ + + N+ + I + A Q Sbjct: 1 MTQNNKSNAAHAEGGIPWKHIVGFALSVVLTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59 Query: 61 IIVHLVFFLHMSTKVEDG 78 + L+ F+HM+ + Sbjct: 60 AALQLLMFMHMTEGRDGK 77 >gi|167461104|ref|ZP_02326193.1| hypothetical protein Plarl_00788 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 104 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 50/88 (56%), Gaps = 2/88 (2%) Query: 12 HSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHM 71 H + + ++ +I+SL+LT++ F V+ G DK + L ++L + Q+I LV+++HM Sbjct: 14 HKHEGPRNHIISYIISLLLTMLAFAAVLYGGL-DKTFLYLFLLLLGVVQVIFQLVYWMHM 72 Query: 72 STKVEDGWSIMAMIFTIIMVAICFVGSM 99 K I+++IF ++++ ++ Sbjct: 73 KEKGHVLP-IISLIFGVVVMLTAVAAAV 99 >gi|196249840|ref|ZP_03148536.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp. G11MC16] gi|196210716|gb|EDY05479.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp. G11MC16] Length = 99 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 N H + L+GF+LSL+LT + + K + + IVL A+ Q + L Sbjct: 2 GTNGHHESFPWKHLIGFVLSLLLTFAALWVALSSGLPLKAV-IVVIVLFAMIQASLQLFM 60 Query: 68 FLHMSTKVEDGWSIMAMIFTIIMV 91 F+H++ M+++ + Sbjct: 61 FMHVAESDSGKVQTFNMVYSFFIA 84 >gi|299535601|ref|ZP_07048922.1| cytochrome aa3 quinol oxidase, subunit IV [Lysinibacillus fusiformis ZC1] gi|298728801|gb|EFI69355.1| cytochrome aa3 quinol oxidase, subunit IV [Lysinibacillus fusiformis ZC1] Length = 94 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77 KQ ++GF SL+LTI+ +V F + N+ +++ A+AQ V LV F+H+ + Sbjct: 7 KQHVMGFGFSLLLTIVALAVV--KFDMSLNMAFGILLVTALAQATVQLVLFMHIGESEDK 64 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVM 102 +++++ + + +G+++ M Sbjct: 65 KTLYTTILYSVFVGVVTIIGTLFAM 89 >gi|239636439|ref|ZP_04677441.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus warneri L37603] gi|239597794|gb|EEQ80289.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus warneri L37603] Length = 96 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 T + VGFI S++LT++ + + I A Q + L+ F+H++ Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTSMT-FQAKVTIIFGFAFIQAALQLLMFMHLTEGK 61 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + + +IF II+ I +G+ WVM +++ Sbjct: 62 DGRVQLFKVIFAIIITLIIVIGTYWVMQGGHSH 94 >gi|322151|pir||F45335 cytochrome-c oxidase (EC 1.9.3.1) chain IVb - Bacillus firmus gi|142789|gb|AAA22367.1| cytochrome oxidase subunit IV [Bacillus firmus] Length = 114 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 1/83 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 ++ +V F L + LT++ F V ++ I + A+ Q + L FF+HM K Sbjct: 26 IRKQIVAFALMIFLTLMSFMAVATDVI-PRSFAIPFIFILAVIQFALQLFFFMHMKDKDH 84 Query: 77 DGWSIMAMIFTIIMVAICFVGSM 99 + + I V + Sbjct: 85 GWANAFMISGIFITVPTIAALML 107 >gi|288553206|ref|YP_003425141.1| cytochrome caa3 subunit IV [Bacillus pseudofirmus OF4] gi|298286795|sp|Q04452|COX4_BACPE RecName: Full=Cytochrome c oxidase subunit 4B; AltName: Full=Cytochrome aa3 subunit 4B; AltName: Full=Cytochrome c oxidase polypeptide IVB gi|288544366|gb|ADC48249.1| cytochrome caa3 subunit IV [Bacillus pseudofirmus OF4] Length = 114 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 1/83 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 ++ +V F L + LT++ F V ++ I + A+ Q + L FF+HM K Sbjct: 26 IRKQIVVFALMIFLTLMSFMAVATDVI-PRSFAIPFIFILAVIQFALQLFFFMHMKDKDH 84 Query: 77 DGWSIMAMIFTIIMVAICFVGSM 99 + + I V + Sbjct: 85 GWANAFMISGIFITVPTIAALML 107 >gi|304405376|ref|ZP_07387035.1| cytochrome C oxidase subunit IV [Paenibacillus curdlanolyticus YK9] gi|304345415|gb|EFM11250.1| cytochrome C oxidase subunit IV [Paenibacillus curdlanolyticus YK9] Length = 106 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Query: 12 HSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHM 71 H + ++ +V +I SL+LT+I F VM G + + + +++ A Q+ V + F++HM Sbjct: 16 HKHEGPQKHIVAYIFSLLLTLIAFAAVMAGEV-NTSFIIFILLMMAGLQVFVQMGFWMHM 74 Query: 72 STKVEDGWSIMAMIFTIIMVAICFVGSMW 100 + I + +++ + + W Sbjct: 75 KDRGHLYPIIGILTGVVVVFTMVIMAEYW 103 >gi|229918525|ref|YP_002887171.1| cytochrome C oxidase subunit IV [Exiguobacterium sp. AT1b] gi|229469954|gb|ACQ71726.1| cytochrome C oxidase subunit IV [Exiguobacterium sp. AT1b] Length = 104 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%) Query: 20 CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGW 79 L+ F + ++LT + FG V I + A+ Q+ + L F+HM+ + W Sbjct: 23 QLISFAMMILLTFVAFGAVYAELMPVWAAGGFLI-ILAVIQVFLQLYIFMHMNNRGN-TW 80 Query: 80 SIMAMIFTIIMVAICFV 96 + M I + I Sbjct: 81 IVGMMWLGIFVAIITVA 97 >gi|323488487|ref|ZP_08093732.1| cytochrome caa3 oxidase (subunit IV) [Planococcus donghaensis MPA1U2] gi|323397855|gb|EGA90656.1| cytochrome caa3 oxidase (subunit IV) [Planococcus donghaensis MPA1U2] Length = 110 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + L F + + LT+I F +V GF ++ I+L A Q+++ L +F+HMS K Sbjct: 26 MRGHLATFAIMIFLTLIAFTMVAAGF--SVYLIVPIILLLAGIQVVLQLYYFMHMSGKGH 83 Query: 77 DGWSIMAM--IFTIIMVAICFVGSMW 100 + +F + + FV +W Sbjct: 84 GMIAFFMFSGMFVAFITVLTFVTIIW 109 >gi|289807956|ref|ZP_06538585.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 41 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/37 (51%), Positives = 31/37 (83%) Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 K ++GW++ A IFT++++AI VGS+W+M++LN NMM Sbjct: 3 KSDEGWNMTAFIFTVLIIAILVVGSIWIMWNLNYNMM 39 >gi|297583922|ref|YP_003699702.1| cytochrome C oxidase subunit IV [Bacillus selenitireducens MLS10] gi|297142379|gb|ADH99136.1| cytochrome C oxidase subunit IV [Bacillus selenitireducens MLS10] Length = 115 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77 K +V + L + +T + F + I+L A Q+I L F+HM K Sbjct: 28 KTQIVSYFLMIAITSMAFISIATDAIPS-GFAIPFILLLAGIQVIFQLYVFMHMGEKKTS 86 Query: 78 GWSIMAMIFTIIMVAICFVGSM 99 +IM I++ +++A VG++ Sbjct: 87 WVNIM--IWSGMLIAALTVGAL 106 >gi|327441187|dbj|BAK17552.1| heme/copper-type cytochrome/quinol oxidase, subunit 4 [Solibacillus silvestris StLB046] Length = 114 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 10/94 (10%) Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70 H+ ++ +V F + + LT I F V+ F + I+L A Q+++ L F+H Sbjct: 20 EHAKAHMRKQVVNFAIMIFLTFIAFAAVLADFAP--TFIIPIILLLAGVQVVLQLYAFMH 77 Query: 71 MSTKVEDG--------WSIMAMIFTIIMVAICFV 96 + + WS + FT + + Sbjct: 78 LEDRTTHMVGVIEFFIWSAAFIAFTFFLAFTTII 111 >gi|255028385|ref|ZP_05300336.1| hypothetical protein LmonL_02601 [Listeria monocytogenes LO28] Length = 71 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 46 KNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 N+ + I + A Q + L+ F+HM+ + I ++F + + +GS WVM Sbjct: 6 TNVKVVIIFIFAFIQAALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIG 65 Query: 106 NNN 108 + N Sbjct: 66 HMN 68 >gi|289811051|ref|ZP_06541680.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 40 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 24/40 (60%) Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIV 54 G+ K + GFILS+ILT+IPF +VM G I+ + Sbjct: 1 GSVKTYMTGFILSVILTVIPFWMVMTGAASPAVILGSILA 40 >gi|319654028|ref|ZP_08008120.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. 2_A_57_CT2] gi|317394221|gb|EFV74967.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. 2_A_57_CT2] Length = 94 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 + ++GF+ S++LT+I + + + +++ A Q V LV F+H + Sbjct: 8 KQVLGFVFSIMLTVIALSV--YFLDMSFELAMTILLITAFIQAAVQLVVFMHAGESKDKK 65 Query: 79 WSIMAMIFTIIMVAICFVGSM 99 + + + + G++ Sbjct: 66 SIYTTLYYGFFIALVTVFGTL 86 >gi|313625762|gb|EFR95395.1| quinol oxidase subunit 4 [Listeria innocua FSL J1-023] Length = 62 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%) Query: 50 CLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108 + I + A Q + L+ F+HM+ + I ++F + + +GS WVM + N Sbjct: 1 VVIIFIFAFIQAALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 59 >gi|332969497|gb|EGK08516.1| prokaryotic cytochrome C oxidase subunit IV superfamily protein [Desmospora sp. 8437] Length = 105 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 ++ + ++ F+ L+ T I F +V L +N++ I+L A Q+++ L F+H+ K Sbjct: 21 SEGRYMLSFVWMLLFTGISFVLV-GMNLLPENLIIPAILLLAALQVLMQLFTFMHLDFKW 79 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWV 101 ++ I+ WV Sbjct: 80 YLTATVFMGSGCIVAATAIIAMLYWV 105 >gi|23099711|ref|NP_693177.1| cytochrome aa3 quinol oxidase subunit IV [Oceanobacillus iheyensis HTE831] gi|22777941|dbj|BAC14212.1| cytochrome aa3 quinol oxidase subunit IV [Oceanobacillus iheyensis HTE831] Length = 94 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 2/84 (2%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 + + GFI SL+LT+I + + + +++ A Q V L+ F+H + G Sbjct: 8 KQVNGFIFSLLLTVIALSV--YFLDMSFAMGLTILIVTAFIQAGVQLIVFMHAGESEDKG 65 Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102 ++ + ++ + GS+ M Sbjct: 66 TIYTSIYYGALIALLTVFGSLLAM 89 >gi|332974251|gb|EGK11183.1| cytochrome c oxidase subunit 4B [Desmospora sp. 8437] Length = 101 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 + + F++ L+LT + F V + ++ + I+ A Q+++ F+H+ K E Sbjct: 20 KYVASFVVMLLLTGLSFAAVAMN-IVPQSWIIPLILALATVQVLMQFFSFMHLHLKKEAV 78 Query: 79 WSIMAMIFTIIMVAIC 94 I++ +++ + + + Sbjct: 79 --IVSFMYSGVFLGLI 92 >gi|261406336|ref|YP_003242577.1| cytochrome aa3 quinol oxidase subunit IV [Paenibacillus sp. Y412MC10] gi|329922313|ref|ZP_08277990.1| cytochrome aa3 quinol oxidase, subunit IV [Paenibacillus sp. HGF5] gi|261282799|gb|ACX64770.1| cytochrome aa3 quinol oxidase, subunit IV [Paenibacillus sp. Y412MC10] gi|328942176|gb|EGG38447.1| cytochrome aa3 quinol oxidase, subunit IV [Paenibacillus sp. HGF5] Length = 95 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 + + G+I SL+L+ + +++ + +++ AI Q V L+ F+H+ + Sbjct: 9 KHVAGYISSLVLSAVALVVLLD---MPAASKVAVLLVTAILQAAVQLMLFMHVGESEDKK 65 Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102 + + F + + + G++++ Sbjct: 66 SVYINIAFALFVGLVTIFGTLFIF 89 >gi|253574493|ref|ZP_04851834.1| cytochrome c oxidase subunit 4 [Paenibacillus sp. oral taxon 786 str. D14] gi|251846198|gb|EES74205.1| cytochrome c oxidase subunit 4 [Paenibacillus sp. oral taxon 786 str. D14] Length = 94 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 Q ++G++ SLIL+ + +V + + +++CA Q+ V L F+H+ G Sbjct: 8 QHVMGYVFSLILSAVALSVVFWD--MSFAVGMTILLVCAAVQMSVQLFMFMHIGENRSKG 65 Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102 +++ + + + G++ M Sbjct: 66 ALYANLVYALFVGLVTVFGTLLTM 89 >gi|299534637|ref|ZP_07047969.1| cytochrome caa3 oxidase subunit IV [Lysinibacillus fusiformis ZC1] gi|298730010|gb|EFI70553.1| cytochrome caa3 oxidase subunit IV [Lysinibacillus fusiformis ZC1] Length = 114 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 10/88 (11%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 ++ ++ F + + T I F +V F K ++ ++L A Q+++ L F+H+ K Sbjct: 27 MRKQVINFAIMIFFTFIAFAVVAADF--SKYLIMPFVLLLAGVQVVLQLYSFMHLEDKKT 84 Query: 77 D--------GWSIMAMIFTIIMVAICFV 96 W + + FT + + + Sbjct: 85 HFGGVIGFFMWMGILIAFTFFLAFLTII 112 >gi|315646712|ref|ZP_07899828.1| cytochrome aa3 quinol oxidase, subunit IV [Paenibacillus vortex V453] gi|315277918|gb|EFU41241.1| cytochrome aa3 quinol oxidase, subunit IV [Paenibacillus vortex V453] Length = 95 Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 + + G+I SL+L+ + +++ + +++ AI Q V L+ F+H+ + Sbjct: 9 KHVAGYISSLVLSAVALVVLLD---MPTASKFAILLVTAILQAAVQLMLFMHVGESDDKK 65 Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102 + + F + + + G++++ Sbjct: 66 SVYINIAFALFVGLVTIFGTLFIF 89 >gi|89099557|ref|ZP_01172432.1| cytochrome c oxidase, subunit IV [Bacillus sp. NRRL B-14911] gi|89085710|gb|EAR64836.1| cytochrome c oxidase, subunit IV [Bacillus sp. NRRL B-14911] Length = 84 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 ++ F L + LT++ F V F + I++ A+ Q+I L +F+HMS K + Sbjct: 1 MQVITFALMIFLTLVAFVAVGYEEFSAW-FIVPFILILAVVQVIFQLYYFMHMSHKGHEA 59 Query: 79 WSIMAMIFTIIMVAICFV 96 ++ ++ Sbjct: 60 PALFLYSGLLVGAITVLA 77 >gi|253574579|ref|ZP_04851920.1| cytochrome C oxidase subunit IV [Paenibacillus sp. oral taxon 786 str. D14] gi|251846284|gb|EES74291.1| cytochrome C oxidase subunit IV [Paenibacillus sp. oral taxon 786 str. D14] Length = 106 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69 + + ++ ++ FI S++LT+I + ++ + +++ A+ Q++V L +++ Sbjct: 14 HRQRHEGPEKHIIAFIFSIVLTLI-AFAAVAAGGVNTAFTVILLLVMAVLQVLVQLGYWM 72 Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103 HM K + + W+ + Sbjct: 73 HMKDKGHLIPILFMAGGFFVAFTAIIAALYWMWW 106 >gi|126649760|ref|ZP_01721996.1| hypothetical protein BB14905_16220 [Bacillus sp. B14905] gi|126593479|gb|EAZ87424.1| hypothetical protein BB14905_16220 [Bacillus sp. B14905] Length = 114 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 10/88 (11%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 ++ ++ F + + T I F +V F K ++ ++L A Q+++ L F+H+ K Sbjct: 27 MRKQVLNFAIMIFFTFIAFAVVAADF--SKYLIMPFVLLLAGVQVVLQLYSFMHLEDKKT 84 Query: 77 D--------GWSIMAMIFTIIMVAICFV 96 W + + FT + + + Sbjct: 85 HYGGVIGFFMWMGILIAFTFFLAFLTII 112 >gi|169826978|ref|YP_001697136.1| cytochrome caa3 oxidase (subunit IV) [Lysinibacillus sphaericus C3-41] gi|168991466|gb|ACA39006.1| cytochrome caa3 oxidase (subunit IV) [Lysinibacillus sphaericus C3-41] Length = 114 Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 10/88 (11%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 ++ ++ F + + T I F +V F K ++ ++L A Q+++ L F+H+ K Sbjct: 27 MRKQVLNFAIMIFFTFIAFAVVAADF--SKYLIMPFVLLLAGVQVVLQLYSFMHLEDKKT 84 Query: 77 D--------GWSIMAMIFTIIMVAICFV 96 W + + FT + + + Sbjct: 85 HFGGVIGFFMWMGILIAFTFFLAFLTII 112 >gi|126651762|ref|ZP_01723964.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. B14905] gi|126591440|gb|EAZ85547.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. B14905] Length = 94 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 + ++GF LS+ILTII V F + I +++ A Q + LV F+H + Sbjct: 8 KQVMGFALSIILTIIA-ACVYF-FQISMPITMTILLVTAFIQAGLQLVVFMHAGETNDKP 65 Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102 + + +++ + G++ M Sbjct: 66 AIYTNIYYGLVIALVTIFGTLLCM 89 >gi|212224619|ref|YP_002307855.1| hypothetical membrane protein, conserved [Thermococcus onnurineus NA1] gi|212009576|gb|ACJ16958.1| hypothetical membrane protein, conserved [Thermococcus onnurineus NA1] Length = 345 Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K L+GF++++I +I GIV G ++ ++ + + L+FF ++ E Sbjct: 4 LKAYLIGFLIAVI--VIAAGIVWYG---GWKLLLQVVLALGFLSVTLMLLFFTALTFYAE 58 Query: 77 D-GWSIMAMIFTII 89 + + IFT+I Sbjct: 59 SWKYGGILAIFTVI 72 >gi|295698392|ref|YP_003603047.1| hypothetical protein RIEPE_0169 [Candidatus Riesia pediculicola USDA] gi|291157309|gb|ADD79754.1| hypothetical protein RIEPE_0169 [Candidatus Riesia pediculicola USDA] Length = 70 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%) Query: 51 LTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110 + I + +IA+I +H + FL++ E + I ++F II+ I GS+W+M+HL NM Sbjct: 1 MIIFISSIARISIHFLVFLNLKLFKEKIYKISFLMFFIIISFILSSGSLWIMHHLRTNMS 60 Query: 111 SMEGM 115 + Sbjct: 61 NQHET 65 >gi|330950892|gb|EGH51152.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae Cit 7] Length = 31 Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 21/28 (75%) Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILT 31 ++ H+ +S+G+ K ++GF+LS+ILT Sbjct: 3 NSHHSAEDNSHGSVKSYVIGFVLSIILT 30 >gi|327439286|dbj|BAK15651.1| heme/copper-type cytochrome/quinol oxidase, subunit 4 [Solibacillus silvestris StLB046] Length = 93 Score = 41.7 bits (97), Expect = 0.039, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 ++GF+ SLILT+I +++ + + +++ A Q + + F+H + Sbjct: 8 GQIMGFVFSLILTVIA--MLVYFTDMSFTTGMVILLVTAFIQAGLQFIVFMHAGETNDKW 65 Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102 +++ I +V + +GS+ ++ Sbjct: 66 AIYSNIVYGIGLVVLTVLGSLLIL 89 >gi|89099674|ref|ZP_01172548.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. NRRL B-14911] gi|89085617|gb|EAR64744.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. NRRL B-14911] Length = 84 Score = 41.3 bits (96), Expect = 0.047, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 2/80 (2%) Query: 23 GFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIM 82 GF+ SLILT + +++ F + + +V+ A Q + LV F+H + G Sbjct: 2 GFVFSLILTAVA--LMVYFFDMSYAVGLTILVITAFIQAALQLVVFMHAGESDDKGTIFT 59 Query: 83 AMIFTIIMVAICFVGSMWVM 102 + ++I + + G++ M Sbjct: 60 NIYYSIFIALVTVFGTLLTM 79 >gi|313635469|gb|EFS01713.1| quinol oxidase subunit 4 [Listeria seeligeri FSL N1-067] Length = 60 Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N N G + +VGF LS+ILT++ + + N+ + I + A Q Sbjct: 1 MAQNNKSNTAHAEGGIPWKHIVGFALSIILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59 Query: 61 I 61 Sbjct: 60 A 60 >gi|315290024|ref|ZP_07872199.1| quinol oxidase subunit 4 [Listeria ivanovii FSL F6-596] gi|313630856|gb|EFR98565.1| quinol oxidase subunit 4 [Listeria ivanovii FSL F6-596] Length = 59 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60 M +N N G + +VGF LS+ILT++ + + N+ + I + A Q Sbjct: 1 MAQNNKSNAAHAEGGIPWKHIVGFALSIILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59 >gi|126653832|ref|ZP_01725695.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. B14905] gi|126589669|gb|EAZ83806.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. B14905] Length = 93 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 46/85 (54%), Gaps = 2/85 (2%) Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77 KQ ++GF SL+LT++ + + F + + +++ A+AQ V LV F+H+ + Sbjct: 7 KQHVMGFGFSLLLTLV--ALAVVTFDMSYKVAFAILLVTALAQATVQLVLFMHIGESEDK 64 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVM 102 +++++ + + +G+++ M Sbjct: 65 KTLYTTILYSVFVGVVTIIGTLFAM 89 >gi|56964155|ref|YP_175886.1| cytochrome caa3 oxidase subunit IV CoxD [Bacillus clausii KSM-K16] gi|56910398|dbj|BAD64925.1| cytochrome caa3 oxidase subunit IV CoxD [Bacillus clausii KSM-K16] Length = 115 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 + +V F+L L LT++ F V N I++ A+ Q+++ L+FF+HM K Sbjct: 27 IRNQIVVFVLMLFLTVLAFAAVGADII-PTNFAVPFILILAVVQLLLQLLFFMHMKDKDH 85 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWV 101 ++ + + V + + Sbjct: 86 TWATVFIITGIFVTVPTIVSLMLLI 110 >gi|169829428|ref|YP_001699586.1| cytochrome aa3 quinol oxidase subunit IV [Lysinibacillus sphaericus C3-41] gi|168993916|gb|ACA41456.1| cytochrome aa3 quinol oxidase subunit IV [Lysinibacillus sphaericus C3-41] Length = 93 Score = 38.6 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 46/85 (54%), Gaps = 2/85 (2%) Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77 KQ ++GF SL+LT++ + + F + + +++ A+AQ V LV F+H+ + Sbjct: 7 KQHVMGFGFSLLLTLV--ALAVVTFDMSYKMAFAILLVTALAQATVQLVLFMHIGESEDK 64 Query: 78 GWSIMAMIFTIIMVAICFVGSMWVM 102 +++++ + + +G+++ M Sbjct: 65 KTLYTTILYSVFVGVVTIIGTLFAM 89 >gi|283780695|ref|YP_003371450.1| caa(3)-type oxidase, subunit IV [Pirellula staleyi DSM 6068] gi|283439148|gb|ADB17590.1| caa(3)-type oxidase, subunit IV [Pirellula staleyi DSM 6068] Length = 173 Score = 37.1 bits (85), Expect = 0.95, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 44/101 (43%), Gaps = 8/101 (7%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIV----MKGFFLDKNIMCLTIVLC 56 M + + + + H G + + F+ +LT I F + ++ + + V C Sbjct: 1 MGHASGSHTHTHVPGGVGKYVAVFVALCVLTAISFAVGNSQQLRENAPGVMMAMMMAVSC 60 Query: 57 AIAQIIVHLVFFLHMSTKVEDGW--SIMAMIFTIIMVAICF 95 A A +++ +FF+H+ + + +I A I + +V + Sbjct: 61 AKASLVI--LFFMHLKYEANWKYVLTIPASIMSFFLVLMLI 99 >gi|149923342|ref|ZP_01911750.1| Caa(3)-type oxidase, subunit IV [Plesiocystis pacifica SIR-1] gi|149815822|gb|EDM75344.1| Caa(3)-type oxidase, subunit IV [Plesiocystis pacifica SIR-1] Length = 256 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 8/94 (8%) Query: 7 HNMNMHSYGT-KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H H + T Q FI L LTI+ + + G + + + +C + +++ Sbjct: 15 HPHEDHHHVTPVWQFTAVFIALLFLTILTYAVSFAGLGPASLPVAMAVAICKGSLVVL-- 72 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSM 99 FF+H++ + A +F + ++ I + Sbjct: 73 -FFMHLAYEDR----FYAFVFVVSLIFIAIFFTF 101 >gi|218671103|ref|ZP_03520774.1| hypothetical protein RetlG_05283 [Rhizobium etli GR56] Length = 41 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 21/32 (65%), Positives = 27/32 (84%) Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112 +MA+IFT+I+VAI GS+WVM+HLN NMM M Sbjct: 1 MMALIFTLIIVAIALSGSLWVMHHLNTNMMPM 32 >gi|297625015|ref|YP_003706449.1| cytochrome c class I [Truepera radiovictrix DSM 17093] gi|297166195|gb|ADI15906.1| cytochrome c class I [Truepera radiovictrix DSM 17093] Length = 464 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 38/84 (45%), Gaps = 14/84 (16%) Query: 3 YDNIHNMNMH-------SYGT-KKQCL-VGFILSLILTIIPFGIVMKG----FFLDKNIM 49 + H + H ++G+ + V +L++I T I F +V ++ + + Sbjct: 2 HKPEHETSPHKPEGHPEAHGSSVGFYIFVAVVLAII-TYIEFALVEHQETWFAWMSRPWL 60 Query: 50 CLTIVLCAIAQIIVHLVFFLHMST 73 +V+ + + ++ ++FF+H+ Sbjct: 61 FFWLVVLSAIKFLMVVMFFMHLKQ 84 >gi|315645045|ref|ZP_07898171.1| cytochrome C oxidase subunit IV [Paenibacillus vortex V453] gi|315279466|gb|EFU42771.1| cytochrome C oxidase subunit IV [Paenibacillus vortex V453] Length = 109 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69 + H ++ +V FI S++LT I + ++ + +++ A+ Q+ V + +++ Sbjct: 17 HRHRVEGPEKHIVVFIFSIVLTAI-AFAAVAAGGINTAFTIIILLVMAVLQVFVQMGYWM 75 Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103 H+ K + + + + WV + Sbjct: 76 HLKDKGHLMPILFMIGGFFVASTCIVMALFWVWW 109 >gi|261404605|ref|YP_003240846.1| cytochrome C oxidase subunit IV [Paenibacillus sp. Y412MC10] gi|261281068|gb|ACX63039.1| cytochrome C oxidase subunit IV [Paenibacillus sp. Y412MC10] Length = 107 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69 + H ++ +V FI S++LT I + ++ + +++ A+ Q+ V + +++ Sbjct: 15 HRHRVEGPEKHIVVFIFSIVLTAI-AFAAVAAGGINTAFTIILLLVMAVLQVFVQMGYWM 73 Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103 H+ K + + + + WV + Sbjct: 74 HLKDKGHLMPILFMIGGFFVASTCIVMALFWVWW 107 >gi|240102383|ref|YP_002958692.1| TRP-repeat-containing protein [Thermococcus gammatolerans EJ3] gi|239909937|gb|ACS32828.1| TRP-repeat-containing protein [Thermococcus gammatolerans EJ3] Length = 339 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76 K ++GF+++++ I IV + + I+ + L+FF ++ E Sbjct: 4 LKAYIIGFLIAVL--AIAGFIVYE---WGWVKLLQLILAVGFVGFTLALLFFTALTLYAE 58 Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVM 102 W A++ ++ AI GS V+ Sbjct: 59 S-WKYGAIL--AVLTAIAGYGSYLVL 81 >gi|298247274|ref|ZP_06971079.1| integral membrane sensor signal transduction histidine kinase [Ktedonobacter racemifer DSM 44963] gi|297549933|gb|EFH83799.1| integral membrane sensor signal transduction histidine kinase [Ktedonobacter racemifer DSM 44963] Length = 391 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 16/34 (47%) Query: 7 HNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMK 40 H H + L+G+ L+++ T I F I M Sbjct: 10 HRHADHRHSWWHSPLLGYPLAVLFTAIAFLIPMS 43 >gi|299137318|ref|ZP_07030500.1| acriflavin resistance protein [Acidobacterium sp. MP5ACTX8] gi|298600723|gb|EFI56879.1| acriflavin resistance protein [Acidobacterium sp. MP5ACTX8] Length = 1075 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 9/86 (10%) Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75 + K +G ILS+IL F I+M F + I+L AI I ++ FL ++ Sbjct: 889 SFKSFAIGLILSIIL---VFLILMAQFAS---FVDPFIILLAIPPGISGVILFLLVTGTS 942 Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWV 101 +IM+++ ++M I S+ + Sbjct: 943 ---INIMSLMGVLMMTGIVVSDSILI 965 >gi|290985578|ref|XP_002675502.1| predicted protein [Naegleria gruberi] gi|284089099|gb|EFC42758.1| predicted protein [Naegleria gruberi] Length = 827 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 46/102 (45%), Gaps = 12/102 (11%) Query: 7 HNMNMHSYGTKKQC-LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65 H H + + ++ F LS+++T+ F ++ F+ I + +++ I++ Sbjct: 442 HYHCEHEHTFFRYFTVIYFQLSILITL--FLLIGFTFYFIGWISGVCLIVLL---IMISF 496 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNN 107 V F+ + D +F +M + +G+++++ LN Sbjct: 497 VLFMRVDIDAADA------LFACLMTFMFLLGAIFILGSLNA 532 >gi|229137497|ref|ZP_04266107.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST26] gi|228645944|gb|EEL02168.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST26] Length = 49 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 56 CAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 A+AQ ++ L+ F+H+ E ++ MI++ + ++W+ + + Sbjct: 1 MAVAQALLQLIMFMHLKEG-EGRVQVLTMIYSFFVATATVGLTVWIFFSM 49 >gi|312196014|ref|YP_004016075.1| integral membrane export protein [Frankia sp. EuI1c] gi|311227350|gb|ADP80205.1| putative integral membrane export protein [Frankia sp. EuI1c] Length = 755 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 21/54 (38%) Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 S G+ L+GF+ +LI+ I F V + + + I+ H Sbjct: 180 GQSAGSGSSILIGFLAALIILAIVFRTVAATVLPLASAVVALVSGLGAIYILSH 233 >gi|332969686|gb|EGK08702.1| cytochrome-c oxidase subunit IV [Desmospora sp. 8437] Length = 74 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 SLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIF 86 L++T I F V +F +I I++ A Q+I+ L F+H+ + + M Sbjct: 1 MLLVTAIAFASVGSRYF-PASITLTVILVMAGIQLILQLTSFMHLDRRSQIPILFMTAGL 59 Query: 87 TIIMVAIC 94 ++ + Sbjct: 60 GFSLIIVV 67 >gi|329895173|ref|ZP_08270857.1| Fructokinase [gamma proteobacterium IMCC3088] gi|328922487|gb|EGG29828.1| Fructokinase [gamma proteobacterium IMCC3088] Length = 300 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%) Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67 HS+ L F +L+LT P IV+ G + + + L A Q+ +L Sbjct: 203 GSAHHSHDIIGYYLGSFAANLLLTYAPNYIVLGGGVSLTDGLLNRVRLSAFEQLGGYLGR 262 Query: 68 FLHMST 73 F H+ Sbjct: 263 FHHVDE 268 >gi|158315441|ref|YP_001507949.1| MMPL domain-containing protein [Frankia sp. EAN1pec] gi|158110846|gb|ABW13043.1| MMPL domain protein [Frankia sp. EAN1pec] Length = 781 Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 20/54 (37%) Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64 S G+ +GF +LI+ + F V + + + + I+ H Sbjct: 180 GQSDGSGSSVFIGFAAALIILALVFRTVAATVLPLASAVAALVSGLGVIYILSH 233 >gi|229010128|ref|ZP_04167341.1| Quinol oxidase, subunit IV [Bacillus mycoides DSM 2048] gi|228751125|gb|EEM00938.1| Quinol oxidase, subunit IV [Bacillus mycoides DSM 2048] Length = 49 Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 56 CAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 A+AQ ++ L+ F+H+ E ++ MI++ + ++W+ + + Sbjct: 1 MAVAQALLQLIMFMHLKEG-EGRIQVLTMIYSFFVATATVGLTVWIFFSM 49 >gi|228913388|ref|ZP_04077021.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228919550|ref|ZP_04082914.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228932129|ref|ZP_04095020.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228944450|ref|ZP_04106823.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228983899|ref|ZP_04144092.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|296501450|ref|YP_003663150.1| cytochrome aa3 quinol oxidase polypeptide IV [Bacillus thuringiensis BMB171] gi|228775812|gb|EEM24185.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228815352|gb|EEM61600.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228827557|gb|EEM73300.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228840193|gb|EEM85470.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228846297|gb|EEM91316.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|296322502|gb|ADH05430.1| cytochrome aa3 quinol oxidase polypeptide IV [Bacillus thuringiensis BMB171] Length = 49 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 56 CAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105 A+AQ ++ L+ F+H+ E I+ MI++ + ++W+ + + Sbjct: 1 MAVAQALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 49 >gi|229083934|ref|ZP_04216237.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-44] gi|228699369|gb|EEL52051.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-44] Length = 61 Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 44 LDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103 + + + I++ A+AQ ++ L+ F+H+ + E I+ MI++ + ++W+ + Sbjct: 1 MPLSTILTAIIVMALAQGLLQLIMFMHL-REGEGTIQILTMIYSFFVAIATVGLTVWIFF 59 Query: 104 HL 105 + Sbjct: 60 SM 61 >gi|92114512|ref|YP_574440.1| hypothetical protein Csal_2394 [Chromohalobacter salexigens DSM 3043] gi|91797602|gb|ABE59741.1| conserved hypothetical protein [Chromohalobacter salexigens DSM 3043] Length = 376 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 7/78 (8%) Query: 28 LILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFT 87 L T+ PF + + + + L ++ C + I+ L F W + +F Sbjct: 98 LFFTL-PFFLATTVWASGQAVFTLLLIGCGLLAILDPLYF----GLAQRHRW--LYFMFH 150 Query: 88 IIMVAICFVGSMWVMYHL 105 + V + + ++ +M HL Sbjct: 151 ALCVFVVVLVTLPIMLHL 168 >gi|89894026|ref|YP_517513.1| hypothetical protein DSY1280 [Desulfitobacterium hafniense Y51] gi|89333474|dbj|BAE83069.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 888 Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 7/97 (7%) Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVM--KGFFLDKNIMCLTIVLCAIAQIIV-----HL 65 ++G+ + ++G +L LT++ F I + G+ L + I+ A V L Sbjct: 747 AHGSGIRAIIGGVLIGALTLVAFYIGLREYGYTLGSTDIPADILTYARTMAFVVLAASQL 806 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 + L M + +++ ++ AI + +M Sbjct: 807 FYSLSMRHATKSIFAVGIFSNRYLIAAIIVGLLLQLM 843 >gi|219668410|ref|YP_002458845.1| ATPase P [Desulfitobacterium hafniense DCB-2] gi|219538670|gb|ACL20409.1| ATPase, P-type (transporting), HAD superfamily, subfamily IC [Desulfitobacterium hafniense DCB-2] Length = 882 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 7/97 (7%) Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVM--KGFFLDKNIMCLTIVLCAIAQIIV-----HL 65 ++G+ + ++G +L LT++ F I + G+ L + I+ A V L Sbjct: 741 AHGSGIRAIIGGVLIGALTLVAFYIGLREYGYTLGSTDIPADILTYARTMAFVVLAASQL 800 Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102 + L M + +++ ++ AI + +M Sbjct: 801 FYSLSMRHATKSIFAVGIFSNRYLIAAIIVGLLLQLM 837 >gi|313625765|gb|EFR95397.1| quinol oxidase subunit 4 [Listeria innocua FSL J1-023] Length = 55 Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 23/54 (42%) Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIV 54 M +N N G + +VGF LS+ILT++ + + + + + Sbjct: 1 MTQNNKSNAAHAEGGIPWKHIVGFALSVILTLLAVWVAIYSTLTTNVKVVIIFI 54 >gi|78221313|ref|YP_383060.1| 2-acyl-glycerophospho-ethanolamine acyltransferase [Geobacter metallireducens GS-15] gi|78192568|gb|ABB30335.1| AMP-dependent synthetase and ligase [Geobacter metallireducens GS-15] Length = 1128 Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 1/80 (1%) Query: 25 ILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAM 84 I ++ LT+ F + M L + + + + IV L F+ + + ++A Sbjct: 294 IGAVGLTVCSFVLAMMPASLWAVLAVVALFGVSAGLFIVPLQSFIQLRAPADRRGEVLAA 353 Query: 85 -IFTIIMVAICFVGSMWVMY 103 F + + G +WV+ Sbjct: 354 SSFLSWVGVLLASGLLWVLS 373 >gi|71902997|ref|YP_279800.1| permease [Streptococcus pyogenes MGAS6180] gi|71802092|gb|AAX71445.1| permease [Streptococcus pyogenes MGAS6180] Length = 235 Score = 34.4 bits (78), Expect = 6.2, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 18/35 (51%) Query: 27 SLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61 S+ILT I FG+ + FL N+ + A Q+ Sbjct: 99 SVILTGIAFGMALFTPFLPSNVTVAALAFFASIQV 133 >gi|329923599|ref|ZP_08279043.1| prokaryotic cytochrome C oxidase subunit IV [Paenibacillus sp. HGF5] gi|328941152|gb|EGG37451.1| prokaryotic cytochrome C oxidase subunit IV [Paenibacillus sp. HGF5] Length = 95 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69 + H ++ +V FI S++LT I + ++ + +++ A+ Q+ V + +++ Sbjct: 3 HRHRVEGPEKHIVVFIFSIVLTAI-AFAAVAAGGINTAFTIILLLVMAVLQVFVQMGYWM 61 Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103 H+ K + + + + WV + Sbjct: 62 HLKDKGHLMPILFMIGGFFVASTCIVMALFWVWW 95 >gi|138894230|ref|YP_001124683.1| hypothetical protein GTNG_0556 [Geobacillus thermodenitrificans NG80-2] gi|134265743|gb|ABO65938.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] Length = 409 Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 27 SLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIF 86 ++IL I+ F I M G + ++ I+ + ++ FL + W + A+ F Sbjct: 311 AMILVIVAFMIAMSGLNMPESA---FIIGASFIPFFTPMLMFLRVGLVSVPMWEV-ALSF 366 Query: 87 TIIMVAICF 95 +++ I Sbjct: 367 ALLLATIAV 375 >gi|330808871|ref|YP_004353333.1| hypothetical protein PSEBR_a2078 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376979|gb|AEA68329.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 378 Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 10/83 (12%) Query: 19 QCLVGFILSLILTIIP--FGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF----LHMS 72 FI S++LTII F +V + I+ + I+VHL+++ L Sbjct: 2 SYEFVFIRSIVLTIIIGLFLLVTGRAARKRA----CILAFWVFAIVVHLIWWRLPELKGG 57 Query: 73 TKVEDGWSIMAMIFTIIMVAICF 95 W + A + ++ + Sbjct: 58 WSEAGRWLVSAWVGAVLTAVVLI 80 >gi|161503258|ref|YP_001570370.1| zinc transporter [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189041682|sp|A9MQT3|ZNTB_SALAR RecName: Full=Zinc transport protein ZntB gi|160864605|gb|ABX21228.1| hypothetical protein SARI_01326 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 327 Score = 34.0 bits (77), Expect = 7.5, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 26/65 (40%) Query: 36 GIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICF 95 +VM+ + + + + + +F +++ GW +F I++V + Sbjct: 256 ALVMQESLTRRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGGGWRFGFSLFCILLVVLIA 315 Query: 96 VGSMW 100 ++W Sbjct: 316 GVTLW 320 >gi|294788821|ref|ZP_06754062.1| copper-exporting ATPase [Simonsiella muelleri ATCC 29453] gi|294483303|gb|EFG30989.1| copper-exporting ATPase [Simonsiella muelleri ATCC 29453] Length = 816 Score = 33.6 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 19/40 (47%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAI 58 + GF LSLIL IP +V F + +T+ L I Sbjct: 428 KYASGFTLSLILLAIPTFLVWWYFADASKALWVTVSLLVI 467 >gi|149185968|ref|ZP_01864283.1| membrane-bound proton-translocating pyrophosphatase [Erythrobacter sp. SD-21] gi|148830529|gb|EDL48965.1| membrane-bound proton-translocating pyrophosphatase [Erythrobacter sp. SD-21] Length = 708 Score = 33.6 bits (76), Expect = 9.4, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 39/87 (44%), Gaps = 5/87 (5%) Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78 +V +++LT + FG + + + L I I I+ +F+ + + G Sbjct: 225 TYVVTVGATMVLTALLFGDALGDLLMPMMALPLLIGGACIVTSIIG-TYFVKL---SKGG 280 Query: 79 WSIMAMIFTIIMV-AICFVGSMWVMYH 104 ++M ++ +V AI + +W++ + Sbjct: 281 TNVMGAMYKGFLVSAILAIPLIWIVMN 307 >gi|168011085|ref|XP_001758234.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690690|gb|EDQ77056.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1043 Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 4/75 (5%) Query: 16 TKKQCLVGF----ILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHM 71 + K+ + GF +L L I F V GF I+ + + +++ ++ Sbjct: 499 SMKKYVFGFGSIQVLVTALVIGAFAHVACGFSGPAAIVIGNGLALSSTAVVLQVLQERGE 558 Query: 72 STKVEDGWSIMAMIF 86 +T + ++F Sbjct: 559 NTSRHGRATFSVLLF 573 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.320 0.165 0.584 Lambda K H 0.267 0.0503 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,781,860,842 Number of Sequences: 14124377 Number of extensions: 93554300 Number of successful extensions: 969087 Number of sequences better than 10.0: 2647 Number of HSP's better than 10.0 without gapping: 714 Number of HSP's successfully gapped in prelim test: 1933 Number of HSP's that attempted gapping in prelim test: 965694 Number of HSP's gapped (non-prelim): 4002 length of query: 119 length of database: 4,842,793,630 effective HSP length: 86 effective length of query: 33 effective length of database: 3,628,097,208 effective search space: 119727207864 effective search space used: 119727207864 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (20.6 bits) S2: 76 (33.6 bits)