HHsearch alignment for GI: 254780472 and conserved domain: COG1845
>COG1845 CyoC Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion].
Probab=100.00 E-value=0 Score=352.23 Aligned_cols=199 Identities=37% Similarity=0.714 Sum_probs=180.5
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-HHHCCCCHHHHHHHHHHHHH
Q ss_conf 16987024653077657202566026888999999999999999999942788888866-00002403578999999999
Q gi|254780472|r 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP-IDVFDISGIFVSTIVLLLSS 85 (210)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~~~~~~-~~~~~~~~~~~nT~iLl~SS 85 (210)
T Consensus 10 ~~~~~-~~~~~~~~~~~~~-~~~~~~G~wvFl~SE~~~Fa~lfaay~~~~~~~~~wp~~~~~~~~~~l~~inT~iLl~SS 87 (209)
T COG1845 10 WANDG-AAAAAAGEHHTDV-GGNGRLGFWVFLMSEVALFASLFAAYFVARASTAGWPPAGTELFDLPLVLINTFILLSSS 87 (209)
T ss_pred HHCCC-CCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 53123-3333455567787-766512899999999999999999999998503578998642345007999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999996333368877655899999999988999987554311100147860167999989979999999999999
Q gi|254780472|r 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFV 165 (210)
Q Consensus 86 ~~~~~a~~a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~ 165 (210)
T Consensus 88 ~t~~~A~~a~~~~~-~~~~~~wL~~T~lLG~~Fv~~q~yE~~hl~~--~~~~~~~f~S~Ff~ltG~HGlHV~~Gli~l~~ 164 (209)
T COG1845 88 FTCGLAVHALRRGN-RKGARAWLLLTLLLGAAFVGGQLYEYYHLIA--FGLTASAFGSAFFLLTGFHGLHVTFGLIWLLV 164 (209)
T ss_pred HHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998177-9889999999999999999999999999985--38561389999999981789999999999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999997079983042679999899999999999999999998209
Q gi|254780472|r 166 LVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 (210)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g~~ 210 (210)
T Consensus 165 ~~~r~~~~g~~~~~~~~v~~~s~YWHFvDvVWi~lF~~vYl~g~~ 209 (209)
T COG1845 165 LLWRIARRGLTTRNHTGVEAASLYWHFVDVVWIFLFTLVYLWGAL 209 (209)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999997168997655158999999999999999999999987339