HHsearch alignment for GI: 254780472 and conserved domain: MTH00039

>MTH00039 COX3 cytochrome c oxidase subunit III; Validated.
Probab=100.00  E-value=0  Score=327.62  Aligned_cols=184  Identities=22%  Similarity=0.453  Sum_probs=162.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC-CHHHCC-CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6572025660268889999999999999999999427888-----8886-600002-40357899999999999999999
Q gi|254780472|r   21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-----AGPA-PIDVFD-ISGIFVSTIVLLLSSLSCSFAML   93 (210)
Q Consensus        21 ~~~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~-----~~~~-~~~~~~-~~~~~~nT~iLl~SS~~~~~a~~   93 (210)
T Consensus        69 ~ht~~v~~gl~~Gm~lFI~SEvmfF~sfFwa~f~~~l~p~~~~G~~WPP~gi~~~~~~~iPllNT~iLl~Sg~tvt~ah~  148 (260)
T MTH00039         69 SHTLSVGTGLRYGMILFITSEVCFFFAFFWAFFHSSLAPTVELGVSWPPTGITPINPFLVPLLNTAVLLSSGVTITWSHH  148 (260)
T ss_pred             CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             79789986743775999999999999999997531038855317423999987888100178989999702799999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99633336887765589999999998899998755431110014786016799998997999999999999999999707
Q gi|254780472|r   94 ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK  173 (210)
Q Consensus        94 a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~~~~~~~~~  173 (210)
T Consensus       149 al~~~-~~~~~~~~L~~Ti~LG~~F~~~Q~~EY~~---a~ft~~d~iygS~Ff~~TGfHG~HVivG~~~l~~~~~r~~~~  224 (260)
T MTH00039        149 SILEG-NRTEAIQALFLTVLLGIYFTILQAWEYYD---APFTIADSVYGSTFFVATGFHGLHVIIGTTFLLVCLIRLIGY  224 (260)
T ss_pred             HHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99955-79889999999999999999989999971---876653357774899887688989999999999999999638


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99830426799998999999999999999999982
Q gi|254780472|r  174 GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG  208 (210)
Q Consensus       174 ~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g  208 (210)
T Consensus       225 ~~~~~~h~~~e~~~wYWHFVDvVWlflf~~iYwWG  259 (260)
T MTH00039        225 HFSNNHHFGFEAAAWYWHFVDVVWLFLYICIYWWG  259 (260)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHEHHHHHEEEEC
T ss_conf             99843218999999997650522430532332747