HHsearch alignment for GI: 254780472 and conserved domain: MTH00039
>MTH00039 COX3 cytochrome c oxidase subunit III; Validated.
Probab=100.00 E-value=0 Score=327.62 Aligned_cols=184 Identities=22% Similarity=0.453 Sum_probs=162.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC-CHHHCC-CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6572025660268889999999999999999999427888-----8886-600002-40357899999999999999999
Q gi|254780472|r 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-----AGPA-PIDVFD-ISGIFVSTIVLLLSSLSCSFAML 93 (210)
Q Consensus 21 ~~~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~-----~~~~-~~~~~~-~~~~~~nT~iLl~SS~~~~~a~~ 93 (210)
T Consensus 69 ~ht~~v~~gl~~Gm~lFI~SEvmfF~sfFwa~f~~~l~p~~~~G~~WPP~gi~~~~~~~iPllNT~iLl~Sg~tvt~ah~ 148 (260)
T MTH00039 69 SHTLSVGTGLRYGMILFITSEVCFFFAFFWAFFHSSLAPTVELGVSWPPTGITPINPFLVPLLNTAVLLSSGVTITWSHH 148 (260)
T ss_pred CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 79789986743775999999999999999997531038855317423999987888100178989999702799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99633336887765589999999998899998755431110014786016799998997999999999999999999707
Q gi|254780472|r 94 ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK 173 (210)
Q Consensus 94 a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~~~~~~~~~ 173 (210)
T Consensus 149 al~~~-~~~~~~~~L~~Ti~LG~~F~~~Q~~EY~~---a~ft~~d~iygS~Ff~~TGfHG~HVivG~~~l~~~~~r~~~~ 224 (260)
T MTH00039 149 SILEG-NRTEAIQALFLTVLLGIYFTILQAWEYYD---APFTIADSVYGSTFFVATGFHGLHVIIGTTFLLVCLIRLIGY 224 (260)
T ss_pred HHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99955-79889999999999999999989999971---876653357774899887688989999999999999999638
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99830426799998999999999999999999982
Q gi|254780472|r 174 GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 174 ~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
T Consensus 225 ~~~~~~h~~~e~~~wYWHFVDvVWlflf~~iYwWG 259 (260)
T MTH00039 225 HFSNNHHFGFEAAAWYWHFVDVVWLFLYICIYWWG 259 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHEHHHHHEEEEC
T ss_conf 99843218999999997650522430532332747