HHsearch alignment for GI: 254780472 and conserved domain: MTH00083
>MTH00083 COX3 cytochrome c oxidase subunit III; Provisional.
Probab=100.00 E-value=0 Score=318.19 Aligned_cols=184 Identities=22% Similarity=0.422 Sum_probs=160.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC-CHHHCCC-CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76572025660268889999999999999999999427888-----8886-6000024-035789999999999999999
Q gi|254780472|r 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-----AGPA-PIDVFDI-SGIFVSTIVLLLSSLSCSFAM 92 (210)
Q Consensus 20 ~~~~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~-----~~~~-~~~~~~~-~~~~~nT~iLl~SS~~~~~a~ 92 (210)
T Consensus 65 G~ht~~v~~glk~GmilFI~SEvmfF~sfFWaffh~~l~p~~~~g~~WPP~gI~~~~p~~lPLlNT~iLlsSg~tvt~ah 144 (256)
T MTH00083 65 GYHNFFVMDGFKFGMILFIFSEFMFFFSIFWTFFDFALVPSHELGGVWSPIGIHLVNYLGVPLLNTLILLSSGVSLTWSH 144 (256)
T ss_pred CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99886888264588999999999999999999999980563854982799998889956260552499982899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99963333688776558999999999889999875543111001478601679999899799999999999999999970
Q gi|254780472|r 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK 172 (210)
Q Consensus 93 ~a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~~~~~~~~ 172 (210)
T Consensus 145 ~~l~~~~--~~~~~~L~~Ti~LG~~F~~~Q~~EY~~---~~ft~~dsvyGS~Ff~~TGfHG~HVi~G~~~l~~~~~r~~~ 219 (256)
T MTH00083 145 NYLLLNN--KSCENSLLLTIFLGLYFTGFQLMEYSE---ASFSISDSIYGSIFYLGTGFHGFHVLCGSLFLLFNFFRLLL 219 (256)
T ss_pred HHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9998385--889999999999999999999999983---86422167314799999988898999999999999999961
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 799830426799998999999999999999999982
Q gi|254780472|r 173 KGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 173 ~~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
T Consensus 220 ~~~s~~~~~~~e~a~~YWHFVDvVWlflf~~iYwWg 255 (256)
T MTH00083 220 SHFNYNHHLGLEMAIWYWHFVDVVWLFLFVFVYWWS 255 (256)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
T ss_conf 799953108999999998875666700513211526