HHsearch alignment for GI: 254780472 and conserved domain: MTH00155
>MTH00155 COX3 cytochrome c oxidase subunit III; Provisional.
Probab=100.00 E-value=0 Score=329.70 Aligned_cols=191 Identities=24% Similarity=0.476 Sum_probs=164.2
Q ss_pred EEEECCCCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC-CHHHCC-CCHHHHHHH
Q ss_conf 4653077657-------2025660268889999999999999999999427888-----8886-600002-403578999
Q gi|254780472|r 14 LFYVKDKKES-------CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-----AGPA-PIDVFD-ISGIFVSTI 79 (210)
Q Consensus 14 ~~~~~~~~~~-------~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~-----~~~~-~~~~~~-~~~~~~nT~ 79 (210)
T Consensus 56 ~W~rDvi~Es~~~G~ht~~v~~glr~Gm~lFI~SEvmfF~sfFWa~f~~~l~p~~~~g~~WPP~gi~~~~p~~iPllNT~ 135 (261)
T MTH00155 56 QWWRDVSREGTFQGLHTLKVTKGLRWGMILFIISEVFFFISFFWAFFHSSLSPSIELGSIWPPLGIIPFNPFQIPLLNTA 135 (261)
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99999840266688765899860257749999999999999999999887341002575689988266774456188889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999996333368877655899999999988999987554311100147860167999989979999999
Q gi|254780472|r 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFG 159 (210)
Q Consensus 80 iLl~SS~~~~~a~~a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~G 159 (210)
T Consensus 136 iLl~S~~tvt~Ah~al~~~-~~~~~~~~L~~Ti~LG~~Fl~~Q~~EY~~---~~ft~~d~vygS~Ff~~TGfHG~HVi~G 211 (261)
T MTH00155 136 ILLSSGVTVTWAHHSLMEN-NYSQATQSLFITILLGIYFTILQAYEYYE---APFSIADSVYGSTFFMATGFHGLHVIIG 211 (261)
T ss_pred HHHCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9983028899999999828-79999999999999999999999999987---3788776539999999987999999999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999970799830426799998999999999999999999982
Q gi|254780472|r 160 LIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 160 li~L~~~~~~~~~~~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
T Consensus 212 ~~~L~~~~~r~~~~~~~~~~~~~~e~a~~YWHFVDvVWlflf~~vY~WG 260 (261)
T MTH00155 212 TTFLLVCLIRHLNNHFSSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWG 260 (261)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEHHHHHHHEEC
T ss_conf 9999999999973899965341003403125553232431435530338