HHsearch alignment of GI: 254780472 and MMDB domain: 1m56_C_71-266
>1m56_C (C:71-266) Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides}
Probab=100.00 E-value=0 Score=319.10 Aligned_cols=185 Identities=23% Similarity=0.461 Sum_probs=168.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------HHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 57202566026888999999999999999999942788888866-----------0000240357899999999999999
Q gi|254780472|r 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP-----------IDVFDISGIFVSTIVLLLSSLSCSF 90 (210)
Q Consensus 22 ~~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~~~~~~-----------~~~~~~~~~~~nT~iLl~SS~~~~~ 90 (210)
|+..++++.|+|||+|++||.|+|++++++|+++|.+.++++.+ .+..+++.+.+||.+|++||.++..
T Consensus 1 h~~~~~~~~~~g~w~fl~SE~~lF~~~f~ay~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~T~~Ll~Ss~~~~~ 80 (196)
T 1m56_C 1 HTPVVRLGLRWGFILFIMSEVMFFSAWFWSFFKHALYPMGPESPIIDGIFPPEGIITFDPWHLPLINTLILLCSGCAATW 80 (196)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTBTTTBCCCSSCTTCCCCCTTTTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85887632468989999999999999999999998287788886537868996534176245488999999833799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999633336887765589999999998899998755431110014786016799998997999999999999999999
Q gi|254780472|r 91 AMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQI 170 (210)
Q Consensus 91 a~~a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~~~~~~ 170 (210)
|+++.++++.++..+.++..|+++|.+|+.+|.+||.++ +.++++|+|+|+||++||+|++||++|++.+..+..|.
T Consensus 81 a~~a~~~~~~~~~~~~~L~~t~~lg~~Fl~~Q~~E~~~~---~~~~~~~~~~s~fy~lTGlH~lHV~~Gli~l~~~~~~~ 157 (196)
T 1m56_C 81 AHHALVHENNRRDVAWGLALAIALGALFTVFQAYEYSHA---AFGFAGNIYGANFFMATGFHGFHVIVGTIFLLVCLIRV 157 (196)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SSCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999988612688999999999999999999999998631---36643249998999999999999999999999999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 707998304267999989999999999999999999820
Q gi|254780472|r 171 LKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 (210)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g~ 209 (210)
.+++++++++.++|.+++||||||+||+++|+++|++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~YWHFVD~vWi~lf~~~Ylwg~ 196 (196)
T 1m56_C 158 QRGHFTPEKHVGFEAAIWYWHFVDVVWLFLFASIYIWGQ 196 (196)
T ss_dssp HTCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 827998331289999999998899889988888862279