HHsearch alignment for GI: 254780473 and conserved domain: MTH00167
>MTH00167 COX1 cytochrome c oxidase subunit I; Provisional.
Probab=94.33 E-value=0.35 Score=25.76 Aligned_cols=250 Identities=18% Similarity=0.238 Sum_probs=103.7
Q ss_pred HHHHHHH-HHHHHHHHHCCCCCCHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC--CHHHH
Q ss_conf 9987556-89999997236898831331566-68999999999973335788899877763298011465432--10132
Q gi|254780473|r 210 GTTLSGI-NLVVTIIKMRCPGMTMMKMPVFV-WTAFCSNIMIIAAFPILTATLFLLTLDRYIGTNFFTNHLGG--NPMMY 285 (671)
Q Consensus 210 gsll~~i-Nfi~TI~~~RapGm~l~rmPlf~-W~~l~tsil~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GG--dplL~ 285 (671)
T Consensus 72 P~l~ggfgNyliPlm-iGA~DmAFPRLN~~SfWl~~~~~~l~~~S~~~~~g~--------~~GWt~YpPLS~~~~~~g~- 141 (513)
T MTH00167 72 PIMIGGFGNWLVPMM-IGAPDMAFPRMNNMSFWLLPPSFSLLLASSAVEAGV--------GTGWTVYPPLSGNIAHAGA- 141 (513)
T ss_pred HHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--------CCCCCCCCCCCCCCCCCCC-
T ss_conf 999999999999997-389731436189999999999999999998636888--------9997416773124689972-
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHH------HHCCCCCHHHHHHHHHHHHHHHHHHHH-------------HHHHC
Q ss_conf 21233340125799-99879999999985------310564026689999999999997533-------------22102
Q gi|254780473|r 286 INLIWIWGHPEVYI-LVLPAFGIFSEVVA------TFSGKRLFGYNSMVYATLAITILSYTV-------------WLHHF 345 (671)
Q Consensus 286 q~LFW~fGHPeVYI-liLPa~Gi~seiip------~fs~kplfgy~~~v~A~~~i~~lsf~V-------------W~HHm 345 (671)
T Consensus 142 ~vd~~i~~l~l~GisSilgsiNfi~Ti~~mRa~Gmt~~rmPlF~Ws~l~ts--~Lll~a~PvL~~a~~mll~Dr~~~t~F 219 (513)
T MTH00167 142 SVDLAIFSLHLAGVSSILGAINFITTIHNMRAKGMEWNRVPLFVWSIWVTT--ILLLLSLPVLAAAITMLLTDRNFNTTF 219 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH--HHHHHHCCHHHHHHHHHHCCCCCCCCC
T ss_conf 499999999999889999899999999984689998553647999999999--999966419999999987052447756
Q ss_pred CCC---CCCHHHHHHH---H-HHHHHHHHHHHHHHHHHHHHHCCCCCEE-CHHHHHHHHHHHHHHHHHHHHHHCCC----
Q ss_conf 247---8758899876---5-3346788987799998787425873022-43799999999999988755653034----
Q gi|254780473|r 346 FTM---GSGANVNAFF---G-IMTMVIAVPTGAKIFNWLFTMRLGKVRF-EVPMMWTLGFMITFLIGGMTGVLLAV---- 413 (671)
Q Consensus 346 Ft~---G~~~~~~~~F---~-i~Tm~IaIPTgvkiFnwl~Tl~~G~ir~-~~pml~~lgfi~~F~iGG~tGv~lA~---- 413 (671)
T Consensus 220 f~p~~GGdpvL~QhLFWffGHPEVYIliLPafGiiSeii~~fs~rk~ifGy~~mv~a~~~I~-----~lgf~VW~HHMFt 294 (513)
T MTH00167 220 FDPSGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIIIFYSGKLRSFGYLGMTWAMFTIG-----LLGFLVWAHHMFT 294 (513)
T ss_pred CCCCCCCCHHHHHCHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHCEEE
T ss_conf 68777865324503010048862441103047899999986137765223678999999999-----9987761400041
Q ss_pred CCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 32111212742204478999999999999999999624430767471689999999999999999999998764053
Q gi|254780473|r 414 PPADFTLHNSLFLVAHFHNTIIGGVVFGLFAGIVYWFPKAFGYQLNSFWGKVSFWCWFVGFYLAFMPLYALGLKGVT 490 (671)
Q Consensus 414 ~~~D~~lHnT~fVVAHFHyvl~gg~vf~~fagiyyW~Pk~~Gr~l~e~lgk~~Fwl~~iGf~l~F~pm~~lGl~Gmp 490 (671)
T Consensus 295 ~G~~~-~~~~~F~~~-----T~~IaiPTgi-kvF~Wi~Tl~~g~i~~~----~pml~~~gfi~~F~---iGG~TGv~ 357 (513)
T MTH00167 295 VGMDV-DTRAYFTAA-----TMVIAVPTGI-KVFSWLATLAGSKIKWE----TPLLWALGFIFLFT---VGGLTGIV 357 (513)
T ss_pred CCCCC-HHHHHHHHH-----HHHHHHHHHH-HHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHH---HHCCCEEE
T ss_conf 27781-277899999-----9998720268-99999999848988998----78999999999997---21433114