HHsearch results for GI: 254780473 and protein with PDBid: 1fft_A
>1fft_A Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: f.24.1.1
Probab=100.00 E-value=0 Score=1679.38 Aligned_cols=657 Identities=62% Similarity=1.165 Sum_probs=646.2
Q ss_pred HHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 60233521465757379999999999999999999750633234430300001479999999999999999999999999
Q gi|254780473|r 11 IFGRLTINSIPYNIPIVLGTFFVVALVGVSIIFAITYYRLWGYLWKEWFTSVDHKKIGIMYIILSLVMLFRGFADAIMMR 90 (671)
Q Consensus 11 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~t~~~~w~~lw~~wltt~dHK~IGi~Yiv~a~~~ll~Gg~~allmR 90 (671)
||||||||+|||||||++++++.++++++++++++||+|||+||||||+|||||||||++|+++|++++++|+++|++||
T Consensus 1 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~w~~wl~t~dHK~IG~~Yli~a~~~~l~Gg~~allmR 80 (663)
T 1fft_A 1 MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYLWKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMR 80 (663)
T ss_dssp ---------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98756711168766779999999999999999999998688899876702367999999999999999999999999999
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98507675667766878989999999999999999999999999999986498640058899999999999999999999
Q gi|254780473|r 91 LQQAIASGGGEGYLDAHHYDQIFTAHGVIMIFFVAMPMITGIMNFVVPLQIGARDVSFPFLNNFSFWMTVAGAVVIMCSL 170 (671)
Q Consensus 91 ~qla~p~~~~~~~l~~~~Ynq~~T~HG~~Mif~~a~p~~~G~~n~lvPl~iGardlaFPrlna~sfWl~~~g~~l~~~S~ 170 (671)
+||+.|+.+.+++++||+|||++|+||++|+|+++||++.|++||++|+|+|||||||||+|++|||++++|+++++.|+
T Consensus 81 ~qla~~~~~~~~~l~~~~Y~q~~T~HG~~Mif~~~~p~~~Gf~n~lvPl~iGard~afPrLn~~sfWl~~~G~~l~~~s~ 160 (663)
T 1fft_A 81 SQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL 160 (663)
T ss_dssp TTTTSSSSCTTCCCSTHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHCCSSCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99861688877778878898988998999999999999999999999997599731278899999999999999999998
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHH
Q ss_conf 71767788831347865587788520458877999999999875568999999723689883133156668999999999
Q gi|254780473|r 171 FIGEFASVGWLAYPPLSGISYSPGVGVDYYIWGLQIAGIGTTLSGINLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIMII 250 (671)
Q Consensus 171 ~~g~~~~~GWt~YpPLs~~~~spg~g~d~~i~gl~l~gigsll~~iNfi~TI~~~RapGm~l~rmPlf~W~~l~tsil~i 250 (671)
+.|++|++|||+|||||+.+++|+.++|+|++|++++|+||+++++|+++||+|+|+|||+++|||+|+|+.++|+++++
T Consensus 161 ~~~~~a~~gWt~YpPLs~~~~~~g~~vd~~i~gl~l~gvgsll~~in~i~Ti~~~RapGm~l~rmPlf~w~~l~t~il~~ 240 (663)
T 1fft_A 161 GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII 240 (663)
T ss_dssp TTTCCCCSTTTTCTTTSSCSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCTTCCGGGCCHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 25887777742166742335688630899999999999999999999999999980599952027606789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 97333578889987776329801146543210132212333401257999987999999998531056402668999999
Q gi|254780473|r 251 AAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSGKRLFGYNSMVYAT 330 (671)
Q Consensus 251 ~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~fGHPeVYIliLPa~Gi~seiip~fs~kplfgy~~~v~A~ 330 (671)
+++|+++++++++++||++|++||+++.||||+|||||||+||||||||+++||+|++||++|++||||+|||+.+++|+
T Consensus 241 la~P~la~a~~~llldr~~g~~ff~~~~GGdplL~q~LFW~fGHPeVYi~iLPa~Gi~seiip~~s~k~lfg~~~~v~A~ 320 (663)
T 1fft_A 241 ASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWAT 320 (663)
T ss_dssp HTTHHHHHHHHHHHHHHHHCCCSSCTTTTCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTSCCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 99788899999999887558752103678728899999998188177765987879999974875088774649999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999975332210224787588998765334678898779999878742587302243799999999999988755653
Q gi|254780473|r 331 LAITILSYTVWLHHFFTMGSGANVNAFFGIMTMVIAVPTGAKIFNWLFTMRLGKVRFEVPMMWTLGFMITFLIGGMTGVL 410 (671)
Q Consensus 331 ~~i~~lsf~VW~HHmFt~G~~~~~~~~F~i~Tm~IaIPTgvkiFnwl~Tl~~G~ir~~~pml~~lgfi~~F~iGG~tGv~ 410 (671)
++|+++|+.||.|||||+|.++..|.+|+++||+|++|||+|+|||++|+|+||+|+++||+|+++|+++|++||+||++
T Consensus 321 ~~i~~lsf~VW~HHmft~g~~~~~~~~f~i~T~~IaiPtgvkvFnwl~Tl~~g~i~~~~pml~~lgfi~~F~iGG~tGv~ 400 (663)
T 1fft_A 321 VCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVL 400 (663)
T ss_dssp HHHHHTTSSCGGGGTTTTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCHHH
T ss_conf 99999998863201003688747787899999999999999999999986268530350789999999999986102243
Q ss_pred CCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 03432111212742204478999999999999999999624430767471689999999999999999999998764053
Q gi|254780473|r 411 LAVPPADFTLHNSLFLVAHFHNTIIGGVVFGLFAGIVYWFPKAFGYQLNSFWGKVSFWCWFVGFYLAFMPLYALGLKGVT 490 (671)
Q Consensus 411 lA~~~~D~~lHnT~fVVAHFHyvl~gg~vf~~fagiyyW~Pk~~Gr~l~e~lgk~~Fwl~~iGf~l~F~pm~~lGl~Gmp 490 (671)
+|+.++|+++||||||||||||++++|++|++|||+|||+||++||++|||+||+|||++++|++++|+|||++|++|||
T Consensus 401 la~~~~d~~~HnT~fVVaHFH~vl~gg~vf~~fag~yyw~Pk~tGr~l~e~lg~~~fwl~fiG~~l~f~pmh~lGl~GmP 480 (663)
T 1fft_A 401 LAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMT 480 (663)
T ss_dssp HTSHHHHHTTTTBHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 21377778862563664632434688999999999999999874440438899999999999899999999998728998
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 03002587005799999999999999999999999999974495356899989999710126998119989475960784
Q gi|254780473|r 491 RRLSQYEDTTLQVYYVVALLGAVLIGIGVFSFVLSFIVSFLNRSKLQDTIGDPWDGRTLEWSISSPSPQYNFAFTPIVST 570 (671)
Q Consensus 491 RR~~~y~~~~~~~~n~istiGa~l~~~g~l~f~~nl~~S~~~~~~~~~~~~dPW~~~tLEW~~~sPpp~~nF~~~P~v~~ 570 (671)
||+++|+|++|++||+++++|++++++|+++|++|+++|+|+|++.+++++||||+|||||+|+||||+|||+++|+|++
T Consensus 481 RR~~~y~~~~~~~~n~vssiGa~i~~~g~l~f~~~i~~si~~~~~~~~~~~~PW~~~tLEW~~~sPpp~~nf~~~P~v~~ 560 (663)
T 1fft_A 481 RRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHE 560 (663)
T ss_dssp TTCSCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCSCSSCTTCCCTTTTSCSSCCTTCC--------
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 73577887035999999999999999999999999999999520467788999999983559899999877788881157
Q ss_pred CCCHHHHHHCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECH
Q ss_conf 55047755539767-76787366189988589999999999999999999999999999999999999831489845567
Q gi|254780473|r 571 IDAWEHMKNRGYRY-PSEGFMPIHMPSNTATGIILAALSIVFSFAMVWYMWWLALLSFISIVFYTIFHTFNYNDGYEVSA 649 (671)
Q Consensus 571 ~d~~~~~k~~~~~~-~~~~~~~ihmP~~t~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (671)
|||+||+|++|++. ++++|||||||+||++|+++++++++++|+++||+||++++|++++++|++.||+|+|+|||||+
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~ihmp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (663)
T 1fft_A 561 RDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPV 640 (663)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCH
T ss_conf 87430133146667898888898599997089999999999999999999999999999999999999955899914379
Q ss_pred HHHHHHHHHHHHCCCCCC
Q ss_conf 899999999751255000
Q gi|254780473|r 650 KDVAFSEEVHRKMNMPKD 667 (671)
Q Consensus 650 ~~~~~~e~~~~~~~~~~~ 667 (671)
|||+|+|++|.+...+++
T Consensus 641 ~~~~~~~~~~~~~~~~~~ 658 (663)
T 1fft_A 641 AEIEKLENQHFDEITKAG 658 (663)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHHCC
T ss_conf 999999999999998614