HHsearch results for GI: 254780473 and protein with PDBid: 2gsm_A

Probab=100.00  E-value=0  Score=1277.39  Aligned_cols=520  Identities=38%  Similarity=0.782  Sum_probs=498.4

Q ss_pred             HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC------------------------CC
Q ss_conf             750633234430300001479999999999999999999999999985076756------------------------67
Q gi|254780473|r   46 TYYRLWGYLWKEWFTSVDHKKIGIMYIILSLVMLFRGFADAIMMRLQQAIASGG------------------------GE  101 (671)
Q Consensus        46 t~~~~w~~lw~~wltt~dHK~IGi~Yiv~a~~~ll~Gg~~allmR~qla~p~~~------------------------~~  101 (671)
                      +.-..++..|++|+|||||||||++|++++++++++|+++|++||+||+.|+..                        .+
T Consensus         8 ~~~~~~~~~~~~w~~t~dHK~IG~~Yl~~~~~~~~iG~~lalliR~eL~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (566)
T 2gsm_A            8 GHEHDRRGFFTRWFMSTNHKDIGVLYLFTGGLVGLISVAFTVYMRMELMAPGVQFMCAEHLESGLVKGFFQSLWPSAVEN   87 (566)
T ss_dssp             ---------CCTTSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCSSSBGGGGGSCHHHHHHHTTSCCCGGG
T ss_pred             CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             67788998625555157789999999999999999999999999998748863101332101111112111112222224


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----C
Q ss_conf             76687898999999999999999999999-99999999864986400588999999999999999999997176-----7
Q gi|254780473|r  102 GYLDAHHYDQIFTAHGVIMIFFVAMPMIT-GIMNFVVPLQIGARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGE-----F  175 (671)
Q Consensus       102 ~~l~~~~Ynq~~T~HG~~Mif~~a~p~~~-G~~n~lvPl~iGardlaFPrlna~sfWl~~~g~~l~~~S~~~g~-----~  175 (671)
                      +..++|.|||++|+||++|||+++||++. ||+||++|+|+|||||||||+|++|||++++|.+++..|+++++     +
T Consensus        88 ~~~~~~~Yn~l~T~HG~iMiF~~~~P~l~ggfgN~lvPlmiGa~DmAFPRlN~~sfwl~~~~~~l~~~s~~~~~~~~~~g  167 (566)
T 2gsm_A           88 CTPNGHLWNVMITGHGILMMFFVVIPALFGGFGNYFMPLHIGAPDMAFPRMNNLSYWLYVAGTSLAVASLFAPGGNGQLG  167 (566)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHTHHHHHTTTHHHHHHHHHHTCSSCSCHHHHHHHHHHHHHHHHHHHHHTTSBCGGGSBS
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             57775246786999999999999999999999999999866997552165888889998899999999986168876667


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             78883134786558778852045887799999999987556899999972368988313315666899999999997333
Q gi|254780473|r  176 ASVGWLAYPPLSGISYSPGVGVDYYIWGLQIAGIGTTLSGINLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPI  255 (671)
Q Consensus       176 ~~~GWt~YpPLs~~~~spg~g~d~~i~gl~l~gigsll~~iNfi~TI~~~RapGm~l~rmPlf~W~~l~tsil~i~a~Pv  255 (671)
                      +++|||.|||||..  +|+.++|+|++|++++|+||+++++|+++|+++||+|||+++|||+|+|+.++|++++++++|+
T Consensus       168 ~~~GWt~y~Pls~~--~~~~~vd~~i~~l~l~gissilgsiNfi~Ti~~~R~~gm~~~~~Plf~w~~l~t~~l~lla~Pv  245 (566)
T 2gsm_A          168 SGIGWVLYPPLSTS--ESGYSTDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPV  245 (566)
T ss_dssp             CCSTTTTCTTHHHH--CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf             77686446773346--8983799999999999999999999999999981589998553819999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             57888998777632980114654321013221233340125799998799999999853105640266899999999999
Q gi|254780473|r  256 LTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSGKRLFGYNSMVYATLAITI  335 (671)
Q Consensus       256 L~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~fGHPeVYIliLPa~Gi~seiip~fs~kplfgy~~~v~A~~~i~~  335 (671)
                      |+++++++++||++|++||+++.||||+||||||||||||||||++||++|++||++|+++|||+|||+.+++|+++|++
T Consensus       246 l~~~~~~ll~Dr~~gt~fF~~~~GGdp~L~qhLFWffgHPeVYi~iLPa~Gi~s~iip~~a~k~lfg~~~~~~a~~~i~~  325 (566)
T 2gsm_A          246 LAGAITMLLTDRNFGTTFFQPSGGGDPVLYQHILWFFGHPEVYIIVLPAFGIVSHVIATFAKKPIFGYLPMVYAMVAIGV  325 (566)
T ss_dssp             HHHHHHHHHHHHHSCCCTTCGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf             99999999998607974047777856999999999748983420141178999999997217777673899999999999


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             97533221022478758899876533467889877999987874258730224379999999999998875565303432
Q gi|254780473|r  336 LSYTVWLHHFFTMGSGANVNAFFGIMTMVIAVPTGAKIFNWLFTMRLGKVRFEVPMMWTLGFMITFLIGGMTGVLLAVPP  415 (671)
Q Consensus       336 lsf~VW~HHmFt~G~~~~~~~~F~i~Tm~IaIPTgvkiFnwl~Tl~~G~ir~~~pml~~lgfi~~F~iGG~tGv~lA~~~  415 (671)
                      +|+.||+||||++|++++.+.+|+.+||+|++||++|+|||++|+|+|++|+++||+|+++|+++|++||+||+++|+.+
T Consensus       326 ls~~VW~HHmf~~G~~~~~~~~F~~~T~~IavPs~vkvfnw~~Tl~~g~~~~~~p~l~~lgfi~~F~~GG~tGi~la~~~  405 (566)
T 2gsm_A          326 LGFVVWAHHMYTAGLSLTQQSYFMMATMVIAVPTGIKIFSWIATMWGGSIELKTPMLWALGFLFLFTVGGVTGIVLSQAS  405 (566)
T ss_dssp             HTTSCGGGGCTTTTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTSCBCCCHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred             HHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCC
T ss_conf             77776110013047647889999999999999999999999999844677404799999999999998611420003542


Q ss_pred             CCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
Q ss_conf             11121274220447899999999999999999962443076747168999999999999999999999876405303002
Q gi|254780473|r  416 ADFTLHNSLFLVAHFHNTIIGGVVFGLFAGIVYWFPKAFGYQLNSFWGKVSFWCWFVGFYLAFMPLYALGLKGVTRRLSQ  495 (671)
Q Consensus       416 ~D~~lHnT~fVVAHFHyvl~gg~vf~~fagiyyW~Pk~~Gr~l~e~lgk~~Fwl~~iGf~l~F~pm~~lGl~GmpRR~~~  495 (671)
                      +|.++||||||||||||++.+++++++||++|||+||++||++|||++|+|||++++|+|++|+|||++|++|||||+++
T Consensus       406 ~d~~~HdTy~VvaHFH~vl~~g~v~~~~~~~yyw~PkltGr~~~~~l~~~hfwl~fiG~~l~f~pmh~lGl~GmPRR~~~  485 (566)
T 2gsm_A          406 VDRYYHDTYYVVAHFHYVMSLGAVFGIFAGIYFWIGKMSGRQYPEWAGKLHFWMMFVGANLTFFPQHFLGRQGMPRRYID  485 (566)
T ss_dssp             HHHHHTTBHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHSEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBSSCSC
T ss_pred             CCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             23011265055321000013789999999999999888686844788999999999999999999999871888660366


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf             58700579999999999999999999999999997449535689998999--9710126998119989475960784
Q gi|254780473|r  496 YEDTTLQVYYVVALLGAVLIGIGVFSFVLSFIVSFLNRSKLQDTIGDPWD--GRTLEWSISSPSPQYNFAFTPIVST  570 (671)
Q Consensus       496 y~~~~~~~~n~istiGa~l~~~g~l~f~~nl~~S~~~~~~~~~~~~dPW~--~~tLEW~~~sPpp~~nF~~~P~v~~  570 (671)
                      |+| ++.+||+++++|++++++|+++|++|++.|+++|||+.+  +|||+  ++||||+++||||+|||+++|+|++
T Consensus       486 Yp~-~~~~~n~i~tiG~~i~~~~~l~f~~nl~~s~~~g~~~~~--~~~w~~~~~tlEW~~~spp~~~nf~~~P~~~~  559 (566)
T 2gsm_A          486 YPE-AFATWNFVSSLGAFLSFASFLFFLGVIFYTLTRGARVTA--NNYWNEHADTLEWTLTSPPPEHTFEQLPKRED  559 (566)
T ss_dssp             CCG-GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCC--SCSSCTTCCSGGGGSCSSCCSSCC--------
T ss_pred             CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             818-899999999999999999999999999999984896878--99877999985038899999878788998774