HHSEARCH alignment of GI: 254780473 and SCOP domain: d1ffta_

Alignment
>d1ffta_ f.24.1.1 (A:) Cytochrome O ubiquinol oxidase, subunit I {Escherichia coli [TaxId: 562]}
Probab=97.16  E-value=0.0068  Score=34.29  Aligned_cols=80  Identities=19%  Similarity=0.301  Sum_probs=39.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHH-------------HHCCC--CCCCH-HHHHH---HH-HHHHHHHHHHHHHHHHH
Q ss_conf             56402668999999999999753322-------------10224--78758-89987---65-33467889877999987
Q gi|254780473|r  317 GKRLFGYNSMVYATLAITILSYTVWL-------------HHFFT--MGSGA-NVNAF---FG-IMTMVIAVPTGAKIFNW  376 (671)
Q Consensus       317 ~kplfgy~~~v~A~~~i~~lsf~VW~-------------HHmFt--~G~~~-~~~~~---F~-i~Tm~IaIPTgvkiFnw  376 (671)
                      |-|+|.+...+.+...  +++..|-+             -++|.  .|-++ ..|..   |+ -...+..+|.-.-+..-
T Consensus       173 ~~PLf~w~~~~t~il~--~la~pvla~~~~~llld~~~g~~ff~~~~ggdp~l~q~LFWffgHP~VYi~ilPa~g~~~~i  250 (501)
T d1ffta_         173 KMPVFTWASLCANVLI--IASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEI  250 (501)
T ss_dssp             GCCHHHHHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHCCCSSCTTTTCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred             HCCCHHHEEEEEEEEH--HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCEEEEEHHHHHHHHHHH
T ss_conf             0554201322444437--66888999888786301004877666777875102022012047841233153899999999


Q ss_pred             HHHHCCCCCEECHHHHHHHHHH
Q ss_conf             8742587302243799999999
Q gi|254780473|r  377 LFTMRLGKVRFEVPMMWTLGFM  398 (671)
Q Consensus       377 l~Tl~~G~ir~~~pml~~lgfi  398 (671)
                      +-+.-|+++.-...+.+++..+
T Consensus       251 ip~~~~~~lf~~~~~~~a~~~i  272 (501)
T d1ffta_         251 AATFSRKRLFGYTSLVWATVCI  272 (501)
T ss_dssp             HHHHHTSCCSSHHHHHHHHHHH
T ss_pred             HHHHCCCCCCCCHHHHHHHHHH
T ss_conf             8985399653405789999988


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Cytochrome c oxidase subunit I-like
superfamily: Cytochrome c oxidase subunit I-like
family: Cytochrome c oxidase subunit I-like
domain: Cytochrome O ubiquinol oxidase, subunit I
species: Escherichia coli [TaxId: 562]