RPSBLAST alignment for GI: 254780473 and conserved domain: TIGR02843
>gnl|CDD|131890 TIGR02843, CyoB, cytochrome o ubiquinol oxidase, subunit I. Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain which reacts with oxygen, reducing it to water with the concomitant transport of 4 protons across the membrane. Also known as the cytochrome bo complex, cytochrome o ubiquinol oxidase contains four subunits, two heme b cofactors and a copper atom which is believed to be the oxygen active site. This complex is structurally related to the cytochrome caa3 oxidases which utilize cytochrome c as the reductant and contain heme a cofactors, as well as the intermediate form aa3 oxidases which also react directly with quinones as the reductant. Length = 646
Score = 1060 bits (2744), Expect = 0.0
Identities = 435/642 (67%), Positives = 518/642 (80%), Gaps = 1/642 (0%)
Query: 12 FGRLTINSIPYNIPIVLGTFFVVALVGVSIIFAITYYRLWGYLWKEWFTSVDHKKIGIMY 71
FG+LT+++IPY+ PI++ T VAL G++++ AITY+R WGYLW EW T+VDHKKIGIMY
Sbjct: 1 FGKLTLDAIPYHEPIIMVTLAAVALGGLALLGAITYFRKWGYLWNEWLTTVDHKKIGIMY 60
Query: 72 IILSLVMLFRGFADAIMMRLQQAIASGGGEGYLDAHHYDQIFTAHGVIMIFFVAMPMITG 131
II++LVML RGFADAIMMR QQA+ASGG GYL HHYDQIFTAHGVIMIFFVAMP + G
Sbjct: 61 IIVALVMLLRGFADAIMMRTQQALASGGSAGYLPPHHYDQIFTAHGVIMIFFVAMPFVFG 120
Query: 132 IMNFVVPLQIGARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAYPPLSGISY 191
+MN VVPLQIGARDV+FPFLN+ SFW+TV GA+++ SL +GEFA GWLAYPPLS + Y
Sbjct: 121 LMNLVVPLQIGARDVAFPFLNSLSFWLTVVGAILVNVSLGVGEFAQTGWLAYPPLSELQY 180
Query: 192 SPGVGVDYYIWGLQIAGIGTTLSGINLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIMIIA 251
SPGVGVDYYIW LQI+GIGT L+GIN VTIIKMR PGMT+MKMPVF WT+ CSN++IIA
Sbjct: 181 SPGVGVDYYIWALQISGIGTLLTGINFFVTIIKMRAPGMTLMKMPVFTWTSLCSNVLIIA 240
Query: 252 AFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEV 311
+FPILT TL LLTLDRY+G +FFTN GGNPMMY+NLIW WGHPEVYIL+LPAFGIFSEV
Sbjct: 241 SFPILTVTLALLTLDRYLGMHFFTNEAGGNPMMYVNLIWAWGHPEVYILILPAFGIFSEV 300
Query: 312 VATFSGKRLFGYNSMVYATLAITILSYTVWLHHFFTMGSGANVNAFFGIMTMVIAVPTGA 371
VATFS KRLFGY SMV+AT+AIT+LS+ VWLHHFFTMG+GANVNAFFGI TM+IA+PTG
Sbjct: 301 VATFSRKRLFGYTSMVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIATMIIAIPTGV 360
Query: 372 KIFNWLFTMRLGKVRFEVPMMWTLGFMITFLIGGMTGVLLAVPPADFTLHNSLFLVAHFH 431
KIFNWLFTM G++RFE PM+WT+GFM+TF IGGMTGVLLAVPPADF LHNSLFL+AHFH
Sbjct: 361 KIFNWLFTMYKGRIRFETPMLWTIGFMVTFSIGGMTGVLLAVPPADFVLHNSLFLIAHFH 420
Query: 432 NTIIGGVVFGLFAGIVYWFPKAFGYQLNSFWGKVSFWCWFVGFYLAFMPLYALGLKGVTR 491
N IIGGVVFG FAG+ YWFPKAFG++LN GK SFWCWF+GFYLAFMPLY LG G+TR
Sbjct: 421 NVIIGGVVFGCFAGLTYWFPKAFGFKLNEKLGKRSFWCWFIGFYLAFMPLYILGFMGMTR 480
Query: 492 RLSQYEDTTLQVYYVVALLGAVLIGIGVFSFVLSFIVSFLNRSKLQDTIGDPWDGRTLEW 551
RL+ Y++ ++A GA LI G+ ++ VS +R + +DT GDPW GRTLEW
Sbjct: 481 RLNHYDNPEWHPMLIIAAFGAFLIACGILCQIIQIFVSIRDRDQNRDTTGDPWGGRTLEW 540
Query: 552 SISSPSPQYNFAFTPIVSTIDAWEHMKNRGYRYPS-EGFMPIHMPSNTATGIILAALSIV 610
S SSP P YNFA P V DA+ MK +G YP + IHMP NTA G I+ A S+V
Sbjct: 541 STSSPPPFYNFAVIPKVQDRDAFWDMKKKGVAYPRPAKYEDIHMPKNTAAGFIIGAFSLV 600
Query: 611 FSFAMVWYMWWLALLSFISIVFYTIFHTFNYNDGYEVSAKDV 652
F FA+VW++WWLA++ F+ I+ I +F+ + Y V A++V
Sbjct: 601 FGFALVWHIWWLAIIGFVGIIATLIVRSFDDDVDYYVPAEEV 642