HHsearch alignment for GI: 254780474 and conserved domain: MTH00047

>MTH00047 COX2 cytochrome c oxidase subunit II; Provisional.
Probab=100.00  E-value=0  Score=374.92  Aligned_cols=169  Identities=20%  Similarity=0.363  Sum_probs=136.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC
Q ss_conf             99999999999999998853046777777875345661255302278999999999999887751344420000124467
Q gi|254780474|r   56 LMLLIVVPVFFSILFFAWKYRSTNKKARYDPKWCHSTLLELFVWLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSI  135 (332)
Q Consensus        56 l~liV~v~V~~l~~~~~~kyR~~~~~a~~~p~~~hs~~lEi~wt~iP~iIi~~L~~~t~~~~~~ldp~~p~~~~~~~~~~  135 (332)
T Consensus        15 i~l~v~v~~~v-~~~~~~~~~~~~~~~~~~---~~n~~LEi~WTiiP~iil~~l~~~s~~~l~~~~--------------   76 (193)
T MTH00047         15 LALCVFIPCWV-YVVLCWQVYVGNGSVNLG---SENQVLEFLWTVVPTLIVLVLCFLNLNFITYDL--------------   76 (193)
T ss_pred             HHHHHHHHHHH-HHHHHHHHCCCCCCCCCC---CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC--------------
T ss_conf             99999999999-999999980476656647---888177402799999999999999999998354--------------


Q ss_pred             CCCCCCEEEEEEEEEEEEEEEECCCC---------CCCCEEEEEECCCEEEEEEEECCCCHHCCCHHHCCEECCCCCCCE
Q ss_conf             88888668999998436999962678---------774306896369828999983581011022010740311698514
Q gi|254780474|r  136 AKNSKPLVVEVVALDWKWLFLLPEQQ---------VAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMET  206 (332)
Q Consensus       136 ~~~~~~l~I~V~a~qW~W~F~YP~~g---------iatvneL~lPv~~pV~f~ltS~DViHSF~IP~l~~k~daiPG~~t  206 (332)
T Consensus        77 -~~~~~~~ikV~G~QW~W~~~Ypd~~~ds~~~~~~~~vdn~l~lP~~~~v~~~ltS~DViHSf~VP~l~~K~DavPGr~n  155 (193)
T MTH00047         77 -DCFSSETIKVVGHQWYWSYEYSNGSYDSFMTDDIFGVDKPLRLVYGVPYHLLVTSSDVIHSFSVPDLNLKMDAIPGRIN  155 (193)
T ss_pred             -CCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCEECCCCCCEEECCCCCEE
T ss_conf             -6798705999999899999968976445655422157774897169879999996874322651322727625898359


Q ss_pred             EEEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCHH
Q ss_conf             8999942774896661332657611365899970889
Q gi|254780474|r  207 KLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKSEK  243 (332)
Q Consensus       207 ~l~~~a~~~G~y~G~cae~cG~ghs~M~f~v~v~s~~  243 (332)
T Consensus       156 ~~~~~~~~~G~y~g~CsElCG~~Hs~M~~~Ve~v~~~  192 (193)
T MTH00047        156 HLFFCPDRHGVFVGYCSELCGVGHSYMPIVIEVVKNS  192 (193)
T ss_pred             EEEEECCCCEEEEEECHHHCCCCCCCCCEEEEEECCC
T ss_conf             9999889967899987788371606792799997279