HHsearch alignment for GI: 254780474 and conserved domain: PTZ00047
>PTZ00047 cytochrome C oxidase subunit II; Provisional.
Probab=100.00 E-value=1.2e-33 Score=258.95 Aligned_cols=91 Identities=21% Similarity=0.354 Sum_probs=88.2
Q ss_pred CCCCEEEEEECCCEEEEEEEECCCCHHCCCHHHCCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEECC
Q ss_conf 77430689636982899998358101102201074031169851489999427748966613326576113658999708
Q gi|254780474|r 162 VAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKS 241 (332)
Q Consensus 162 iatvneL~lPv~~pV~f~ltS~DViHSF~IP~l~~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG~ghs~M~f~v~v~s 241 (332)
T Consensus 70 LeVDNrLvlPvg~pVr~liTS~DVIHSF~VPslgiK~DaIPGR~n~~~~~~~k~G~Y~GqCaElCG~~Hs~Mpi~Vevvs 149 (163)
T PTZ00047 70 LEVDKRLTLPTRTHIRFLVTATDVIHSWSIPSLGIKADAVPGRLHRINTFILREGVYYGQCSEMCGTLHGFMPIVVEAVS 149 (163)
T ss_pred ECCCCCEEEECCCEEEEEEEECCCHHHCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEHHHHCCCCCCCCEEEEEEC
T ss_conf 52348617028981799998341001100565443655169832799999488957999828871958265837999978
Q ss_pred HHHHHHHHHHH
Q ss_conf 89999999998
Q gi|254780474|r 242 EKGFEDWISKV 252 (332)
Q Consensus 242 ~~~f~~Wv~~~ 252 (332)
T Consensus 150 pE~Y~A~~kk~ 160 (163)
T PTZ00047 150 PEKYAAHAKKY 160 (163)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999987