HHsearch alignment of GI: 254780474 and MMDB domain: 1xme_B_55-168
>1xme_B (B:55-168) Cytochrome C oxidase polypeptide II; cytochrome oxidase, heme, heme-AS, integral membrane protein, oxidoreductase; HET: BNG HEM HAS; 2.30A {Thermus thermophilus}
Probab=99.98 E-value=6.3e-34 Score=260.54 Aligned_cols=95 Identities=20% Similarity=0.278 Sum_probs=88.1
Q ss_pred EEEEEEEEEEECC----------------CCCCCCEEEEEECCCEEEEEEEECCCCHHCCCHHHCCEECCCCCCCEEEEE
Q ss_conf 9984369999626----------------787743068963698289999835810110220107403116985148999
Q gi|254780474|r 147 VALDWKWLFLLPE----------------QQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMETKLHA 210 (332)
Q Consensus 147 ~a~qW~W~F~YP~----------------~giatvneL~lPv~~pV~f~ltS~DViHSF~IP~l~~k~daiPG~~t~l~~ 210 (332)
+|+||+|.|.||+ .+..+.|+|++|+|+||+|.+||+|||||||||+||+|+|||||++|++||
T Consensus 4 ig~qw~W~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~iP~g~~V~~~ltS~DViHsF~ip~~~~k~daiPG~~~~~~f 83 (114)
T 1xme_B 4 VRQEGPWADPAQAVVQTGPNQYTVYVLAFAFGYQPNPIEVPQGAEIVFKITSPDVIHGFHVEGTNINVEVLPGEVSTVRY 83 (114)
T ss_dssp TTTSSTTTCGGGSEEECSSSEEEEEEEEETTEEESSSEEEETTSEEEEEEEBSSSCEEEEETTSSCEEEECBTBCEEEEE
T ss_pred EEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCEEEEEEEECCCCCCEEECCCCCEEEECCCCEEEEEE
T ss_conf 86355023557764457898699999986045678889995899999999918754301011347214552786379999
Q ss_pred EECCCEEEEEECCCCCCCCCCCCEEEEEECC
Q ss_conf 9427748966613326576113658999708
Q gi|254780474|r 211 VMNKKGAYSGFSANYSGRGFSHMRFKFYGKS 241 (332)
Q Consensus 211 ~a~~~G~y~G~cae~cG~ghs~M~f~v~v~s 241 (332)
+|+++|+|+|+|+||||+|||.|+++++|+|
T Consensus 84 ~~~~~G~y~~~C~e~CG~~H~~M~~~v~V~s 114 (114)
T 1xme_B 84 TFKRPGEYRIICNQYCGLGHQNMFGTIVVKE 114 (114)
T ss_dssp ECCSCEEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred EECCCEEEEEECHHHCCCCCCCCEEEEEEEC
T ss_conf 9599889999953543848036806999979