HHsearch results for GI: 254780474 and protein with PDBid: 1byp_A
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=90.39 E-value=0.91 Score=23.73 Aligned_cols=69 Identities=13% Similarity=0.115 Sum_probs=43.6
Q ss_pred CEEEEEECCCEEEEEEEECCCCHHCCCHH------------HCCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCC--
Q ss_conf 30689636982899998358101102201------------0740311698514899994277489666133265761--
Q gi|254780474|r 165 INELVVPIDRPLEFRITASSVMNSFYIPG------------LAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGF-- 230 (332)
Q Consensus 165 vneL~lPv~~pV~f~ltS~DViHSF~IP~------------l~~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG~gh-- 230 (332)
-.+|.+.+|..|+|.-.+ ..-|....-. -+......++-.....++.+++|+|.-.|+- |
T Consensus 16 P~~i~i~~GdtV~f~n~~-~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tf~~~Gty~y~C~~-----H~~ 89 (99)
T 1byp_A 16 PSDLSIASGEKITFKNNA-GFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAP-----HAG 89 (99)
T ss_dssp SSEEEECTTEEEEEEECS-SCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEECSCEEEEEECGG-----GTT
T ss_pred CCEEEECCCCEEEEEECC-CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECC-----CCC
T ss_conf 899998899999999999-89740587347777765435677544565568885699994788259999786-----788
Q ss_pred CCCEEEEEE
Q ss_conf 136589997
Q gi|254780474|r 231 SHMRFKFYG 239 (332)
Q Consensus 231 s~M~f~v~v 239 (332)
+.|...++|
T Consensus 90 ~GM~G~I~V 98 (99)
T 1byp_A 90 AGMVGKVTV 98 (99)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEE
T ss_conf 897799998