HHsearch results for GI: 254780474 and protein with PDBid: 1fft_B
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=100.00 E-value=0 Score=665.20 Aligned_cols=306 Identities=43% Similarity=0.802 Sum_probs=291.8
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 35668899999999998741364326898989999999999999999999999999999998853046777777875345
Q gi|254780474|r 11 SVGKSLKFFFLFFSSVMLSGFEFIVMDPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYDPKWCH 90 (332)
Q Consensus 11 ~~~k~l~~~~l~~~~~lLsGC~~~~l~P~G~ia~~~~~L~~~~~~l~liV~v~V~~l~~~~~~kyR~~~~~a~~~p~~~h 90 (332)
+..|.++++++++++++|+||+.++|+|+|++|+++++|+++++++|++|+++|+++++||+||||+++++++|.|+++|
T Consensus 5 ~~~r~l~~l~ll~~~~lLsGC~~~~l~P~G~~a~~~~~L~~~~~~l~l~V~v~v~~~~~~~~~ryR~~~~~~~~~p~~~~ 84 (315)
T 1fft_B 5 KYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH 84 (315)
T ss_dssp ----------------------CCCSSCCSCCHHHHHHHHHHHHHHTTTTTTHHHHHHHTTTTTTTTSTTTCSSCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCC
T ss_conf 36789999999999999965765445999978999999999999997767767666430034678843677777986355
Q ss_pred CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEE
Q ss_conf 66125530227899999999999988775134442000012446788888668999998436999962678774306896
Q gi|254780474|r 91 STLLELFVWLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSIAKNSKPLVVEVVALDWKWLFLLPEQQVAIINELVV 170 (332)
Q Consensus 91 s~~lEi~wt~iP~iIi~~L~~~t~~~~~~ldp~~p~~~~~~~~~~~~~~~~l~I~V~a~qW~W~F~YP~~giatvneL~l 170 (332)
|+++|++||++|++|+++|++++|++++.+|+++|. +.+++|++|+|+|+||+|+|+||++|++|+|||++
T Consensus 85 ~~~lE~i~~~ip~iivi~l~~~~~~~~~~~~~~~~~---------~~~~~~l~I~V~g~qW~W~f~Yp~~~~~t~neL~i 155 (315)
T 1fft_B 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL---------AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAF 155 (315)
T ss_dssp CSHHHHHTTHHHHHHHHHHHHHHHHHSCTTCCSCCC---------CCCSCCCEEEEECCTTSCEEECTTTCCEEESBCCC
T ss_pred CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---------CCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCC
T ss_conf 745521567766899899999998888865124666---------67899849999866889999735666566765025
Q ss_pred ECCCEEEEEEEECCCCHHCCCHHHCCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEECC-HHHHHHHH
Q ss_conf 36982899998358101102201074031169851489999427748966613326576113658999708-89999999
Q gi|254780474|r 171 PIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKS-EKGFEDWI 249 (332)
Q Consensus 171 Pv~~pV~f~ltS~DViHSF~IP~l~~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG~ghs~M~f~v~v~s-~~~f~~Wv 249 (332)
|+|+||+|+|||+|||||||||+||+|+|+||||+|++||+|+++|+|+|+||||||.|||.|+|+|+|++ ++||++|+
T Consensus 156 P~~~pV~~~ltS~DViHsF~VP~l~~k~daiPG~~~~~~~~a~~~G~y~g~Cae~CG~gHs~M~~~v~vv~~~~~f~~Wv 235 (315)
T 1fft_B 156 PANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 (315)
T ss_dssp CSSSEEEEEECBSSSCEEEEEGGGTEEEEECBTSCEEEEEECCSCBCCEEBCCSCCSTTTTTCCEECCBCSSTHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCEEEECCCCCEEECCCCCEEEEEEECCCCEEEEEEEHHHCCCCCCCCEEEEEEECCHHHHHHHH
T ss_conf 65530189997487112011320085663289861899996189548999805550711335653899987889999999
Q ss_pred HHHHCCCCCC-CHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCHHH
Q ss_conf 9986072456-989999976102126321720478354268731524448856602102466688523440110011
Q gi|254780474|r 250 SKVKRQGTFL-NRQEYLLLKKPSERDSVRYFSPIEKGLYYSILNLCVHPGKICMDEMMRIDALGGGGMRGIDRHSLI 325 (332)
Q Consensus 250 ~~~ka~~~~l-~~~~y~~l~~ps~~~~~~~f~~~~~~lf~~i~~~~~~~~~~~~~~~m~~~~~~g~~~~~~~~~~~~ 325 (332)
+++|+++.++ +.++|++|++|++.++++|||+++|+||+.|+++|+++|+.+...++..++.+++||+++|+...+
T Consensus 236 ~~~k~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~p~Lf~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~g~dm~~~~ 312 (315)
T 1fft_B 236 AKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAE 312 (315)
T ss_dssp HHHHHCSCCBCCHHHHHHHTSSCSSCCSEEESCBCTTHHHHHHHHTTC-----------------------------
T ss_pred HHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98661875566899999986775668853004779732889999873178877877644453447899987777654