HHsearch results for GI: 254780474 and protein with PDBid: 1kdj_A
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=91.46 E-value=0.6 Score=25.02 Aligned_cols=70 Identities=16% Similarity=0.238 Sum_probs=45.0
Q ss_pred CEEEEEECCCEEEEEEEECCCCHHCCC--HHHC-------------CEECCCCCCCEEEEEEECCCEEEEEECCCCCCCC
Q ss_conf 306896369828999983581011022--0107-------------4031169851489999427748966613326576
Q gi|254780474|r 165 INELVVPIDRPLEFRITASSVMNSFYI--PGLA-------------GQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRG 229 (332)
Q Consensus 165 vneL~lPv~~pV~f~ltS~DViHSF~I--P~l~-------------~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG~g 229 (332)
-.+|.+.+|..|+|... +...|.+-. |+.. .-....++......++.+++|+|.-.|+-
T Consensus 16 P~~itv~~GdtV~f~n~-~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tf~~~G~y~y~C~~----- 89 (102)
T 1kdj_A 16 PDSITVSAGEAVEFTLV-GETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKVSTPGTYTFYCTP----- 89 (102)
T ss_dssp SSEEEECTTCCEEEEEC-SSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECCCSCEEEEEECST-----
T ss_pred CCEEEECCCCEEEEEEC-CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECC-----
T ss_conf 89999889999999989-998751677367877766444556576565553468974799994888379999787-----
Q ss_pred CCC--CEEEEEEC
Q ss_conf 113--65899970
Q gi|254780474|r 230 FSH--MRFKFYGK 240 (332)
Q Consensus 230 hs~--M~f~v~v~ 240 (332)
|.. |...++|.
T Consensus 90 H~~~GM~G~I~Ve 102 (102)
T 1kdj_A 90 HKSANMKGTLTVK 102 (102)
T ss_dssp TGGGTCEEEEEEC
T ss_pred CCCCCCEEEEEEC
T ss_conf 7668986999989