HHSEARCH alignment of GI: 254780474 and SCOP domain: d1fftb2

Alignment
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=99.81  E-value=1.8e-21  Score=169.22  Aligned_cols=89  Identities=49%  Similarity=0.985  Sum_probs=86.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH
Q ss_conf             32689898999999999999999999999999999999885304677777787534566125530227899999999999
Q gi|254780474|r   34 IVMDPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYDPKWCHSTLLELFVWLVPLVIVGFLAVIT  113 (332)
Q Consensus        34 ~~l~P~G~ia~~~~~L~~~~~~l~liV~v~V~~l~~~~~~kyR~~~~~a~~~p~~~hs~~lEi~wt~iP~iIi~~L~~~t  113 (332)
                      ++|||+||+|+++++|++..+++|++|+++|.++++|++||||+++++++++|+++||+++|++||+||++|+++++++|
T Consensus         2 s~ldP~gp~a~~i~~L~~~~~~i~~iv~v~V~~~~~~~~~ryR~~~~~~~~~~~~~~n~~lEi~WtiIP~iil~~iav~s   81 (91)
T d1fftb2           2 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLT   81 (91)
T ss_dssp             CCSSCCSCCHHHHHHHHHHHHHHTTTTTTHHHHHHHTTTTTTTTSTTTCSSCCCCCCCSHHHHHTTHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
T ss_conf             77599997899999999999999999999999999764036651687667798656796411468998999999999999


Q ss_pred             HHHHHHHCC
Q ss_conf             988775134
Q gi|254780474|r  114 WDATHRMDP  122 (332)
Q Consensus       114 ~~~~~~ldp  122 (332)
                      |++++++||
T Consensus        82 ~~~~~~lDp   90 (91)
T d1fftb2          82 WKTTHALEP   90 (91)
T ss_dssp             HHHSCTTCC
T ss_pred             HHHHHHCCC
T ss_conf             988750689


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Transmembrane helix hairpin
superfamily: Cytochrome c oxidase subunit II-like, transmembrane region
family: Cytochrome c oxidase subunit II-like, transmembrane region
domain: Cytochrome O ubiquinol oxidase, subunit II
species: Escherichia coli [TaxId: 562]