HHSEARCH alignment of GI: 254780474 and SCOP domain: d1pmya_

Alignment

Probab=92.61  E-value=0.13  Score=27.96  Aligned_cols=96  Identities=14%  Similarity=0.013  Sum_probs=54.9

Q ss_pred             CEEEEEECCCEEEEEEEECCCCHHCCC---HHHCCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEECC
Q ss_conf             306896369828999983581011022---01074031169851489999427748966613326576113658999708
Q gi|254780474|r  165 INELVVPIDRPLEFRITASSVMNSFYI---PGLAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKS  241 (332)
Q Consensus       165 vneL~lPv~~pV~f~ltS~DViHSF~I---P~l~~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG~ghs~M~f~v~v~s  241 (332)
                      -.+|.+++|..|+|..+...--+.+..   +.....-..  ++.....++.+++|+|.-+|.--|+.   .|...++|-+
T Consensus        20 P~~ltV~~GDTV~f~n~d~~~h~~~~~~~~~~~~~~~~~--~~~~~~~~tF~~~G~Y~Y~C~pH~~~---GM~G~I~Vgd   94 (123)
T d1pmya_          20 PALVRLKPGDSIKFLPTDKGHNVETIKGMAPDGADYVKT--TVGQEAVVKFDKEGVYGFKCAPHYMM---GMVALVVVGD   94 (123)
T ss_dssp             SSEEEECTTCEEEEECSSSSCCCEECTTSSCTTCCCCBC--CTTSCEEEECCSCEEEEEECSTTTTT---TCEEEEEESS
T ss_pred             CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCEEEEEECCCCCC---CCEEEEEECC
T ss_conf             888998799989996689886412135657666664222--46643222357896089981568788---8779999899


Q ss_pred             H-HHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf             8-99999999986072456989999976
Q gi|254780474|r  242 E-KGFEDWISKVKRQGTFLNRQEYLLLK  268 (332)
Q Consensus       242 ~-~~f~~Wv~~~ka~~~~l~~~~y~~l~  268 (332)
                      + ..+++ ++.+++.  ...+...++|-
T Consensus        95 ~~~n~~~-~~~~~~~--~~~~~~~~~~~  119 (123)
T d1pmya_          95 KRDNLEA-AKSVQHN--KLTQKRLDPLF  119 (123)
T ss_dssp             CCTTHHH-HHTCCCC--HHHHHHHHHHH
T ss_pred             CCCCHHH-HHHHCCC--HHHHHHHHHHH
T ss_conf             9878899-9764023--24699999999

SCOP domain information

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Pseudoazurin
species: Methylobacterium extorquens, strain am1 [TaxId: 408]