BLAST/PSIBLAST alignment of GI: 254780474 and GI: 209546365 at iteration 1
>gi|209546365|ref|YP_002278255.1| ubiquinol oxidase subunit II [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 390
>gi|209539222|gb|ACI59155.1| ubiquinol oxidase, subunit II [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 390
 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 176/301 (58%), Positives = 223/301 (74%), Gaps = 1/301 (0%)

Query: 29  SGFEFIVMDPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYDPKW 88
           +G   +VM P GDIA+QQ  LI I+  LMLLI++PV F  L FAW+YR +N  A Y P+W
Sbjct: 16  AGCNMVVMAPSGDIAVQQRDLIVISTVLMLLIIIPVIFLTLLFAWRYRHSNTAATYAPEW 75

Query: 89  CHSTLLELFVWLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSIAKNSKPLVVEVVA 148
            HST LE+ +W  PL I+  L  +TW +TH++DPY PL+R+  +++I  ++KPL VEVVA
Sbjct: 76  HHSTRLEIVIWAAPLAIIIALGAVTWISTHKLDPYRPLDRLDAARAIPADTKPLTVEVVA 135

Query: 149 LDWKWLFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMETKL 208
           LDWKWLF  PE  +A +NEL  P+D P+ F+ITASSVMNSFYIP LAGQIYAM GMETKL
Sbjct: 136 LDWKWLFFYPELGIATVNELAAPVDMPINFKITASSVMNSFYIPALAGQIYAMPGMETKL 195

Query: 209 HAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKSEKGFEDWISKVKRQGTFLNRQEYLLLK 268
           HAV+NK+G Y GFSANYSG GFSHMRFKF+G + +GF+ W++KVK QGT LNR  YL L+
Sbjct: 196 HAVINKEGEYEGFSANYSGSGFSHMRFKFHGLTREGFDAWVAKVKEQGTMLNRDAYLKLE 255

Query: 269 KPSERDSVRYFSPIEKGLYYSILNLCVHPGKICMDEMMRIDALGGGGMRGI-DRHSLIYD 327
           KPSE++ VRY++  +  LY +ILN+C  PGK+CM+EMM ID  GGGG     +R  L YD
Sbjct: 256 KPSEKEPVRYYAGADADLYDAILNMCATPGKMCMNEMMHIDMTGGGGKESAENRDKLQYD 315

Query: 328 E 328
            
Sbjct: 316 N 316